MUC1 1044

Name: MUC1	Sequence: fasta or formatted (203aa)		NCBI GI: 113206024
Description: mucin 1 isoform 5 precursor		Referenced in: Mucins
Other entries for this name: alt prot [150aa] mucin 1 isoform 6 precursor alt prot [159aa] mucin 1 isoform 7 precursor alt prot [158aa] mucin 1 isoform 8 precursor alt prot [273aa] mucin 1 isoform 1 precursor alt prot [264aa] mucin 1 isoform 2 precursor alt prot [255aa] mucin 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 18 2 C cysteine 3.0 6 1 D aspartate 2.0 4 1 E glutamate 3.0 6 1 F phenylalanine 4.4 9 2 G glycine 7.4 15 2 H histidine 2.0 4 1 I isoleucine 3.4 7 1 K lysine 3.4 7 1 L leucine 8.9 18 5 M methionine 1.0 2 1 N asparagine 3.0 6 1 P proline 8.4 17 2 Q glutamine 2.5 5 1 R arginine 3.9 8 2 S serine 12.3 25 2 T threonine 9.4 19 3 V valine 8.4 17 2 W tryptophan 1.0 2 1 Y tyrosine 3.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 1 isoform 5 precursor MUC1 0.701 mucin 1 isoform 3 precursor MUC1 0.683 mucin 1 isoform 2 precursor MUC1 0.552 mucin 1 isoform 1 precursor MUC1 0.490 mucin 1 isoform 6 precursor MUC1 0.469 mucin 1 isoform 7 precursor MUC1 0.402 mucin 1 isoform 8 precursor LOC100130716 0.021 PREDICTED: similar to mucin 11 LOC100130716 0.021 PREDICTED: similar to Mucin-12 MUC12 0.021 PREDICTED: mucin 12 LOC100294501 0.018 PREDICTED: hypothetical protein LOC100294238 0.018 PREDICTED: hypothetical protein LOC100294204 0.018 PREDICTED: hypothetical protein CD33 0.018 CD33 antigen isoform 2 precursor CD33 0.018 CD33 antigen isoform 1 precursor NACA 0.018 nascent polypeptide-associated complex alpha subuni... TMEM151B 0.015 transmembrane protein 151B LOC729792 0.013 PREDICTED: hypothetical protein LOC729792 0.013 PREDICTED: hypothetical protein LOC729792 0.013 PREDICTED: hypothetical protein LOC100294249 0.013 PREDICTED: hypothetical protein XP_002344067 LOC100294136 0.013 PREDICTED: hypothetical protein LOC100294091 0.013 PREDICTED: hypothetical protein LOC730401 0.013 PREDICTED: hypothetical protein MUC12 0.013 PREDICTED: mucin 12, cell surface associated DCT 0.013 dopachrome tautomerase isoform 2 DCT 0.013 dopachrome tautomerase isoform 1 PRG4 0.013 proteoglycan 4 isoform D PRG4 0.013 proteoglycan 4 isoform C PRG4 0.013 proteoglycan 4 isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.