MUC1 34712

Name: MUC1	Sequence: fasta or formatted (264aa)		NCBI GI: 67189007
Description: mucin 1 isoform 2 precursor		Referenced in: Mucins
Other entries for this name: alt prot [203aa] mucin 1 isoform 5 precursor alt prot [150aa] mucin 1 isoform 6 precursor alt prot [159aa] mucin 1 isoform 7 precursor alt prot [158aa] mucin 1 isoform 8 precursor alt prot [273aa] mucin 1 isoform 1 precursor alt prot [255aa] mucin 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 22 2 C cysteine 1.1 3 1 D aspartate 3.4 9 1 E glutamate 4.2 11 1 F phenylalanine 4.2 11 2 G glycine 7.2 19 2 H histidine 1.9 5 1 I isoleucine 3.4 9 1 K lysine 3.0 8 1 L leucine 9.1 24 5 M methionine 1.1 3 1 N asparagine 3.8 10 1 P proline 6.8 18 2 Q glutamine 4.5 12 1 R arginine 3.8 10 2 S serine 11.4 30 2 T threonine 9.1 24 2 V valine 8.3 22 3 W tryptophan 0.4 1 1 Y tyrosine 4.9 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 1 isoform 2 precursor MUC1 0.948 mucin 1 isoform 3 precursor MUC1 0.926 mucin 1 isoform 1 precursor MUC1 0.528 mucin 1 isoform 5 precursor MUC1 0.287 mucin 1 isoform 7 precursor MUC1 0.269 mucin 1 isoform 6 precursor MUC1 0.145 mucin 1 isoform 8 precursor LOC730036 0.034 PREDICTED: hypothetical protein LOC730036 0.028 PREDICTED: similar to taste receptor protein 1 [Hom... LOC730036 0.028 PREDICTED: similar to taste receptor protein 1 [Hom... IMPG1 0.018 interphotoreceptor matrix proteoglycan 1 NFASC 0.016 neurofascin isoform 4 precursor QSER1 0.016 glutamine and serine rich 1 TMEM27 0.016 transmembrane protein 27 NFASC 0.014 neurofascin isoform 3 precursor NFASC 0.014 neurofascin isoform 2 precursor ZBTB4 0.014 zinc finger and BTB domain containing 4 ZBTB4 0.014 zinc finger and BTB domain containing 4 MUC5B 0.010 mucin 5, subtype B, tracheobronchial LOC100294420 0.010 PREDICTED: similar to mucin 2 C13orf23 0.010 hypothetical protein LOC80209 isoform 2 C13orf23 0.010 hypothetical protein LOC80209 isoform 1 OR5P2 0.010 olfactory receptor, family 5, subfamily P, member 2 ... BPTF 0.010 bromodomain PHD finger transcription factor isoform ... BPTF 0.010 bromodomain PHD finger transcription factor isoform ... LOC100133280 0.008 PREDICTED: similar to Putative POM121-like protein ... HCFC1 0.006 host cell factor 1 MUC4 0.006 mucin 4 isoform a BAP1 0.006 BRCA1 associated protein-1 PHF2 0.006 PHD finger protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.