MUC1 34713

Name: MUC1	Sequence: fasta or formatted (255aa)		NCBI GI: 67189069
Description: mucin 1 isoform 3 precursor		Referenced in: Mucins
Other entries for this name: alt prot [203aa] mucin 1 isoform 5 precursor alt prot [150aa] mucin 1 isoform 6 precursor alt prot [159aa] mucin 1 isoform 7 precursor alt prot [158aa] mucin 1 isoform 8 precursor alt prot [273aa] mucin 1 isoform 1 precursor alt prot [264aa] mucin 1 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 19 2 C cysteine 1.2 3 1 D aspartate 3.5 9 1 E glutamate 4.3 11 1 F phenylalanine 4.3 11 2 G glycine 7.5 19 2 H histidine 2.0 5 1 I isoleucine 3.5 9 1 K lysine 2.7 7 1 L leucine 9.4 24 5 M methionine 1.2 3 1 N asparagine 3.9 10 1 P proline 6.3 16 2 Q glutamine 4.7 12 1 R arginine 3.9 10 2 S serine 11.8 30 2 T threonine 8.2 21 1 V valine 8.6 22 3 W tryptophan 0.4 1 1 Y tyrosine 5.1 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 1 isoform 3 precursor MUC1 0.983 mucin 1 isoform 2 precursor MUC1 0.977 mucin 1 isoform 1 precursor MUC1 0.562 mucin 1 isoform 5 precursor MUC1 0.279 mucin 1 isoform 7 precursor MUC1 0.279 mucin 1 isoform 6 precursor MUC1 0.165 mucin 1 isoform 8 precursor LOC730036 0.035 PREDICTED: hypothetical protein LOC730036 0.029 PREDICTED: similar to taste receptor protein 1 [Hom... LOC730036 0.029 PREDICTED: similar to taste receptor protein 1 [Hom... IMPG1 0.019 interphotoreceptor matrix proteoglycan 1 NFASC 0.017 neurofascin isoform 4 precursor QSER1 0.017 glutamine and serine rich 1 TMEM27 0.017 transmembrane protein 27 NFASC 0.014 neurofascin isoform 3 precursor NFASC 0.014 neurofascin isoform 2 precursor OR5P2 0.010 olfactory receptor, family 5, subfamily P, member 2 ... BPTF 0.010 bromodomain PHD finger transcription factor isoform ... BPTF 0.010 bromodomain PHD finger transcription factor isoform ... AMBRA1 0.008 activating molecule in beclin-1-regulated autophagy ... MUC16 0.008 mucin 16 PHF2 0.008 PHD finger protein 2 SPARCL1 0.008 SPARC-like 1 SPARCL1 0.008 SPARC-like 1 KIRREL 0.006 kin of IRRE like HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 4 [... HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 3 [... HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 1 [... HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 2 [... ANKS3 0.006 ankyrin repeat and sterile alpha motif domain contai... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.