MUC1 1047

Name: MUC1	Sequence: fasta or formatted (158aa)		NCBI GI: 113206030
Description: mucin 1 isoform 8 precursor		Referenced in: Mucins
Other entries for this name: alt prot [203aa] mucin 1 isoform 5 precursor alt prot [150aa] mucin 1 isoform 6 precursor alt prot [159aa] mucin 1 isoform 7 precursor alt prot [273aa] mucin 1 isoform 1 precursor alt prot [264aa] mucin 1 isoform 2 precursor alt prot [255aa] mucin 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 14 2 C cysteine 5.7 9 1 D aspartate 0.0 0 0 E glutamate 3.8 6 1 F phenylalanine 3.8 6 2 G glycine 10.1 16 2 H histidine 4.4 7 1 I isoleucine 1.9 3 1 K lysine 3.8 6 1 L leucine 11.4 18 5 M methionine 0.6 1 1 N asparagine 1.3 2 1 P proline 9.5 15 2 Q glutamine 1.3 2 1 R arginine 4.4 7 1 S serine 12.0 19 2 T threonine 8.2 13 3 V valine 5.1 8 2 W tryptophan 2.5 4 1 Y tyrosine 1.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 1 isoform 8 precursor MUC1 0.498 mucin 1 isoform 5 precursor MUC1 0.259 mucin 1 isoform 1 precursor MUC1 0.256 mucin 1 isoform 3 precursor MUC1 0.256 mucin 1 isoform 6 precursor MUC1 0.233 mucin 1 isoform 2 precursor MUC1 0.233 mucin 1 isoform 7 precursor C9orf86 0.032 Rab-like GTP-binding protein 1 isoform 2 LOC100130716 0.026 PREDICTED: similar to mucin 11 LOC100130716 0.026 PREDICTED: similar to Mucin-12 MUC12 0.026 PREDICTED: mucin 12 CD33 0.022 CD33 antigen isoform 2 precursor CD33 0.022 CD33 antigen isoform 1 precursor MUC12 0.016 PREDICTED: mucin 12, cell surface associated PRG4 0.016 proteoglycan 4 isoform D PRG4 0.016 proteoglycan 4 isoform C PRG4 0.016 proteoglycan 4 isoform B PRG4 0.016 proteoglycan 4 isoform A LOC100292149 0.016 PREDICTED: hypothetical protein BPTF 0.016 bromodomain PHD finger transcription factor isoform ... BPTF 0.016 bromodomain PHD finger transcription factor isoform ... FLJ10404 0.013 hypothetical protein LOC54540 KCP 0.013 cysteine rich BMP regulator 2 isoform 2 KCP 0.013 cysteine rich BMP regulator 2 isoform 1 KRTAP5-5 0.013 keratin associated protein 5-5 MUC5AC 0.010 mucin 5AC FRAS1 0.010 Fraser syndrome 1 POU4F1 0.010 POU domain, class 4, transcription factor 1 PAPLN 0.010 papilin KRTAP5-2 0.010 keratin associated protein 5-2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.