Guide to the Human Genome
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Name: QSER1 Sequence: fasta or formatted (1735aa) NCBI GI: 115647981
Description:

glutamine and serine rich 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8        100           3
 C cysteine            0.7         13           1
 D aspartate           4.2         73           2
 E glutamate           5.9        103           3
 F phenylalanine       2.8         49           1
 G glycine             4.3         75           2
 H histidine           2.6         45           2
 I isoleucine          3.6         63           2
 K lysine              6.8        118           4
 L leucine             8.4        146           3
 M methionine          1.4         24           1
 N asparagine          4.7         81           3
 P proline             6.2        108           3
 Q glutamine           8.9        154           3
 R arginine            2.8         49           2
 S serine             14.7        255           4
 T threonine           7.8        135           4
 V valine              5.7         99           2
 W tryptophan          0.2          4           1
 Y tyrosine            2.4         41           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamine and serine rich 1 
PRR12                 0.063   proline rich 12 
LOC100134138          0.015   PREDICTED: similar to mucin, partial 
LOC100133408          0.014   PREDICTED: similar to mucin 
MUC3A                 0.012   PREDICTED: mucin 3A, cell surface associated, parti...
MUC6                  0.012   mucin 6, gastric 
MUC4                  0.011   mucin 4 isoform a 
LOC100131514          0.011   PREDICTED: similar to hCG1747327, partial 
MUC17                 0.010   mucin 17 
MUC12                 0.010   PREDICTED: mucin 12 
MUC21                 0.010   mucin 21 
MUC16                 0.010   mucin 16 
MUC12                 0.010   PREDICTED: mucin 12, cell surface associated 
HEG1                  0.010   HEG homolog 1 
MUC3B                 0.009   PREDICTED: mucin 3B, cell surface associated, parti...
MUC3A                 0.009   PREDICTED: mucin 3A, intestinal 
NFAT5                 0.009   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.009   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.009   nuclear factor of activated T-cells 5 isoform d [Ho...
NFAT5                 0.009   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.009   nuclear factor of activated T-cells 5 isoform a [Hom...
MUC12                 0.008   PREDICTED: mucin 12 
POLR2A                0.008   DNA-directed RNA polymerase II A 
BPTF                  0.008   bromodomain PHD finger transcription factor isoform ...
LOC100133790          0.008   PREDICTED: intestinal mucin-like, partial 
BAT2D1                0.007   HBxAg transactivated protein 2 
MUC12                 0.007   PREDICTED: mucin 12 
RTF1                  0.007   Paf1/RNA polymerase II complex component 
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
UBAP2L                0.007   ubiquitin associated protein 2-like isoform a [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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