MUC1 34476

Name: MUC1	Sequence: fasta or formatted (273aa)		NCBI GI: 65301117
Description: mucin 1 isoform 1 precursor		Referenced in: Mucins
Other entries for this name: alt prot [203aa] mucin 1 isoform 5 precursor alt prot [150aa] mucin 1 isoform 6 precursor alt prot [159aa] mucin 1 isoform 7 precursor alt prot [158aa] mucin 1 isoform 8 precursor alt prot [264aa] mucin 1 isoform 2 precursor alt prot [255aa] mucin 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 19 2 C cysteine 1.1 3 1 D aspartate 3.3 9 1 E glutamate 4.0 11 1 F phenylalanine 5.5 15 3 G glycine 7.3 20 2 H histidine 2.2 6 1 I isoleucine 3.7 10 1 K lysine 2.6 7 1 L leucine 9.9 27 5 M methionine 1.1 3 1 N asparagine 4.0 11 1 P proline 5.9 16 2 Q glutamine 4.8 13 1 R arginine 3.7 10 2 S serine 12.5 34 2 T threonine 8.1 22 1 V valine 8.4 23 3 W tryptophan 0.4 1 1 Y tyrosine 4.8 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 1 isoform 1 precursor MUC1 0.911 mucin 1 isoform 3 precursor MUC1 0.896 mucin 1 isoform 2 precursor MUC1 0.412 mucin 1 isoform 5 precursor MUC1 0.260 mucin 1 isoform 7 precursor MUC1 0.260 mucin 1 isoform 6 precursor MUC1 0.156 mucin 1 isoform 8 precursor LOC730036 0.029 PREDICTED: similar to taste receptor protein 1 [Hom... LOC730036 0.029 PREDICTED: similar to taste receptor protein 1 [Hom... LOC730036 0.029 PREDICTED: hypothetical protein IMPG1 0.029 interphotoreceptor matrix proteoglycan 1 IMPG2 0.023 interphotoreceptor matrix proteoglycan 2 MUC16 0.019 mucin 16 LOC100293231 0.019 PREDICTED: hypothetical protein, partial NFASC 0.015 neurofascin isoform 4 precursor TMEM27 0.015 transmembrane protein 27 TMPRSS11D 0.015 transmembrane protease, serine 11D NFASC 0.013 neurofascin isoform 3 precursor NFASC 0.013 neurofascin isoform 2 precursor SPARCL1 0.010 SPARC-like 1 SPARCL1 0.010 SPARC-like 1 OR5P2 0.010 olfactory receptor, family 5, subfamily P, member 2 ... BPTF 0.008 bromodomain PHD finger transcription factor isoform ... BPTF 0.008 bromodomain PHD finger transcription factor isoform ... ACAN 0.006 aggrecan isoform 2 precursor ACAN 0.006 aggrecan isoform 1 precursor KIRREL 0.006 kin of IRRE like HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 4 [... HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 3 [... HIPK1 0.006 homeodomain-interacting protein kinase 1 isoform 1 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.