| Name: LOC100130988 | Sequence: fasta or formatted (438aa) | NCBI GI: 240255432 | |
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Description: hypothetical protein LOC100130988
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.3 19 2 C cysteine 1.4 6 1 D aspartate 6.8 30 2 E glutamate 4.6 20 2 F phenylalanine 4.3 19 1 G glycine 5.0 22 2 H histidine 3.4 15 2 I isoleucine 4.8 21 1 K lysine 6.8 30 2 L leucine 7.5 33 2 M methionine 1.6 7 1 N asparagine 4.3 19 1 P proline 10.3 45 3 Q glutamine 3.7 16 2 R arginine 5.7 25 2 S serine 7.8 34 4 T threonine 7.1 31 2 V valine 5.5 24 1 W tryptophan 0.9 4 1 Y tyrosine 4.1 18 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC100130988 IFI16 0.012 interferon, gamma-inducible protein 16 PLEKHA4 0.011 pleckstrin homology domain containing family A memb... MLL3 0.008 myeloid/lymphoid or mixed-lineage leukemia 3 BAT2 0.008 HLA-B associated transcript-2 LTBP4 0.007 latent transforming growth factor beta binding prot... LTBP4 0.007 latent transforming growth factor beta binding prot... LTBP4 0.007 latent transforming growth factor beta binding prot... INF2 0.007 inverted formin 2 isoform 2 INF2 0.007 inverted formin 2 isoform 1 C11orf9 0.006 hypothetical protein LOC745 isoform 1 C11orf9 0.006 hypothetical protein LOC745 isoform 2 C5orf32 0.006 hypothetical protein LOC84418 PRR13 0.006 proline rich 13 isoform 1 MUC1 0.006 mucin 1 isoform 7 precursor MUC1 0.006 mucin 1 isoform 6 precursor MYO15A 0.006 myosin XV LOC100289268 0.006 PREDICTED: hypothetical protein XP_002342358 PDE4DIP 0.006 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.006 phosphodiesterase 4D interacting protein isoform 1 ... PYHIN1 0.006 pyrin and HIN domain family, member 1 alpha 2 isofor... PYHIN1 0.006 pyrin and HIN domain family, member 1 alpha 1 isofor... LRRC37A3 0.006 leucine rich repeat containing 37, member A3 LOC100294335 0.006 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.006 PREDICTED: similar to c114 SLIT-like testicular pro... LRRC37A2 0.006 c114 SLIT-like testicular protein LRRC37A 0.006 leucine rich repeat containing 37A PRR13 0.006 proline rich 13 isoform 2 C6orf174 0.004 hypothetical protein LOC387104 PDCD6IP 0.004 programmed cell death 6 interacting protein isoform...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
