Guide to the Human Genome
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Name: ANKS3 Sequence: fasta or formatted (656aa) NCBI GI: 42734375
Description:

ankyrin repeat and sterile alpha motif domain containing 3

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         66           4
 C cysteine            2.4         16           2
 D aspartate           4.7         31           1
 E glutamate           9.1         60           3
 F phenylalanine       1.7         11           1
 G glycine             6.9         45           3
 H histidine           2.4         16           1
 I isoleucine          2.9         19           2
 K lysine              3.8         25           2
 L leucine            11.1         73           3
 M methionine          2.3         15           1
 N asparagine          2.3         15           1
 P proline             5.5         36           2
 Q glutamine           5.9         39           2
 R arginine            6.7         44           2
 S serine              9.6         63           7
 T threonine           4.0         26           1
 V valine              5.0         33           2
 W tryptophan          1.2          8           1
 Y tyrosine            2.3         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and sterile alpha motif domain contai... 
ANKRD50               0.062   ankyrin repeat domain 50 
ANK2                  0.058   ankyrin 2 isoform 3 
ANK2                  0.058   ankyrin 2 isoform 2 
ANK2                  0.058   ankyrin 2 isoform 1 
ANK1                  0.056   ankyrin 1 isoform 9 
ANK1                  0.056   ankyrin 1 isoform 1 
ANK1                  0.056   ankyrin 1 isoform 3 
ANK1                  0.056   ankyrin 1 isoform 2 
ANK1                  0.056   ankyrin 1 isoform 4 
FANK1                 0.055   fibronectin type III and ankyrin repeat domains 1 [...
ANKRD17               0.054   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.054   ankyrin repeat domain protein 17 isoform b 
KIDINS220             0.053   kinase D-interacting substrate of 220 kDa 
ANKRD29               0.052   ankyrin repeat domain 29 
ANK3                  0.051   ankyrin 3 isoform 1 
ANKHD1                0.051   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.051   ANKHD1-EIF4EBP3 protein 
ANKK1                 0.051   ankyrin repeat and kinase domain containing 1 
ANKHD1                0.051   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.051   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKRD7                0.051   ankyrin repeat domain 7 
TANC2                 0.051   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD30B              0.050   ankyrin repeat domain 30B 
RIPK4                 0.050   ankyrin repeat domain 3 
TANC1                 0.047   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.047   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKS6                 0.047   ankyrin repeat and sterile alpha motif domain contai...
POTEF                 0.046   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.044   protein expressed in prostate, ovary, testis, and p...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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