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Search of human proteins with 113204609
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113204609 zinc finger protein 750 [Homo sapiens]
(723 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113204609 zinc finger protein 750 [Homo sapiens] 1484 0.0
gi|21687188 hypothetical protein LOC146325 [Homo sapiens] 104 3e-22
gi|163965366 nascent polypeptide-associated complex alpha subuni... 71 4e-12
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 6e-06
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 50 7e-06
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 50 7e-06
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 50 7e-06
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 50 7e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 4e-05
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 48 4e-05
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 47 5e-05
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 47 5e-05
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 46 1e-04
gi|122937492 SET domain containing 5 [Homo sapiens] 46 1e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 45 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 45 2e-04
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 45 2e-04
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 44 4e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 5e-04
gi|73476377 LBXCOR1 homolog [Homo sapiens] 44 5e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 44 7e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 43 0.001
gi|189181750 human immunodeficiency virus type I enhancer bindin... 43 0.001
gi|116089331 human immunodeficiency virus type I enhancer bindin... 43 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 43 0.001
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 42 0.002
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 42 0.002
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 42 0.002
gi|19924097 synapsin I isoform Ib [Homo sapiens] 42 0.002
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 42 0.002
>gi|113204609 zinc finger protein 750 [Homo sapiens]
Length = 723
Score = 1484 bits (3843), Expect = 0.0
Identities = 723/723 (100%), Positives = 723/723 (100%)
Query: 1 MSLLKERKPKKPHYIPRPPGKPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQD 60
MSLLKERKPKKPHYIPRPPGKPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQD
Sbjct: 1 MSLLKERKPKKPHYIPRPPGKPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQD 60
Query: 61 RVPKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQAR 120
RVPKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQAR
Sbjct: 61 RVPKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQAR 120
Query: 121 GTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPE 180
GTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPE
Sbjct: 121 GTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPE 180
Query: 181 TLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIP 240
TLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIP
Sbjct: 181 TLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIP 240
Query: 241 EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPA 300
EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPA
Sbjct: 241 EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPA 300
Query: 301 TYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPAS 360
TYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPAS
Sbjct: 301 TYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPAS 360
Query: 361 SPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDF 420
SPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDF
Sbjct: 361 SPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDF 420
Query: 421 MQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSL 480
MQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSL
Sbjct: 421 MQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSL 480
Query: 481 NVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAET 540
NVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAET
Sbjct: 481 NVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAET 540
Query: 541 ASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETK 600
ASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETK
Sbjct: 541 ASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETK 600
Query: 601 PGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPE 660
PGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPE
Sbjct: 601 PGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPE 660
Query: 661 PACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAKLQDTARVFTLRRRA 720
PACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAKLQDTARVFTLRRRA
Sbjct: 661 PACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAKLQDTARVFTLRRRA 720
Query: 721 RVS 723
RVS
Sbjct: 721 RVS 723
>gi|21687188 hypothetical protein LOC146325 [Homo sapiens]
Length = 571
Score = 104 bits (259), Expect = 3e-22
Identities = 99/316 (31%), Positives = 136/316 (43%), Gaps = 45/316 (14%)
Query: 5 KERKPKKPHYIPRPPGKPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQD---- 60
+ RKPKKPHYIPRP GKP+ YKCFQCPFTC EKSHL+NHMKY LCK+S++L+ +
Sbjct: 17 RSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLDSPDWAC 76
Query: 61 -RVPKCPKSNSLDPKQTNQPDATAKPASSK----SVANGLSAFDSKLQHSSAREDIKENL 115
R P+ ++ P + + D +P ++ + A L D H
Sbjct: 77 RRGSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGG------GP 130
Query: 116 ELQARGTHRCLGQKPALHRASPCKSPAPEAAL--------GAQPALEGAARPSAFVPVGE 167
+ +A+G+ G P + RA+ K P P L G P GA ++ P G
Sbjct: 131 KSRAKGSP---GPPPPVARATR-KGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGS 186
Query: 168 -HRLKGPDNAEAPETLALHNPTAKAVSFHTKSAFHT---PGYPWKAGSPFLPPEFPHKIS 223
P E PE +LH + V++ + P A PFL P +
Sbjct: 187 VPCYPPPAPGEFPEAHSLH-LSLLGVNYPLSPGLFSYLGPSLAAAAHVPFLASASP-LLP 244
Query: 224 STKGLGAISPYMHPT-IPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPL--LSVYGTQD 280
A+ P PT P EH L L AG + AP+ S GT
Sbjct: 245 PATAFPAVQPPQRPTPAPRLYYPLLLEHTLG------LPAGKAALAKAPVSPRSPSGTPA 298
Query: 281 P---RHFLPHPGPIPK 293
P + +P GP P+
Sbjct: 299 PGLLKVPVPGLGPWPR 314
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 70.9 bits (172), Expect = 4e-12
Identities = 140/563 (24%), Positives = 192/563 (34%), Gaps = 89/563 (15%)
Query: 130 PALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNPTA 189
P A+P P+P+ L P P+A P + L P AP T A P+
Sbjct: 1149 PTTPAATP---PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS- 1204
Query: 190 KAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYTE 249
K TP G+P P P S GL SP PT P P +
Sbjct: 1205 ------PKGGLATPS---PKGAPTTPAATPP--SPKGGLATPSPKGAPTTPAATPP-SPK 1252
Query: 250 HGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPI-PKHLAPSPATYDHYRFF 308
G AT P A + P P L P P+P + P PAT
Sbjct: 1253 GGPAT--PPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT------- 1303
Query: 309 QQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPASSP-SRLNP 367
P P P P S S G PP T + + T PA++P S+ P
Sbjct: 1304 -SPPKGAPTPPA-ATPPSPKGSPGTP-PPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 368 SDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRP--------SPTD 419
+ P+ K E P P A S G + SP+ G A G P SP
Sbjct: 1361 TTPSSK----EGPTPPAATPSHKG--GPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKK 1414
Query: 420 FMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFR--------------PVKKSTECL 465
T T EG AA+ + G L PP + + + P K L
Sbjct: 1415 APATPVTREG-------AATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL 1467
Query: 466 PAQAAETTAESPVSLNVVNGD-------PPAPTGSASLVSEAAPSSPDD-----SSGMGP 513
PA + E P V PAP G+ +L + PSSP + SS P
Sbjct: 1468 PAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPA-VIPSSPKEVPATPSSRRDP 1526
Query: 514 LN-----LSKKSEINLA---ATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPR 565
+ LSKK+ LA A P +T + ++ P S K+ + A
Sbjct: 1527 IAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVT 1586
Query: 566 PA-FPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAV 624
P+ + G P E +P + ++ P+ P P S + A P G
Sbjct: 1587 PSTYKGAPSPKE--LLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTP 1644
Query: 625 DSSEEQKQTAAVALCQLAAYSPR 647
S ++ + A C++ A P+
Sbjct: 1645 SSLKDSPTSPASVTCKMGATVPQ 1667
Score = 45.4 bits (106), Expect = 2e-04
Identities = 129/576 (22%), Positives = 184/576 (31%), Gaps = 82/576 (14%)
Query: 63 PKCPKSNSLDPKQTNQP---------DATAKPASSKSVANGL-SAFDSKLQHSSAREDIK 112
P PK +L PK+T P + A PA ++ A + S+ K + + A + I
Sbjct: 872 PLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIP 931
Query: 113 ENLELQARGTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKG 172
+ + T PA SP PA + A P A PS P G
Sbjct: 932 ASPSPKGAPT------PPAATPPSPKGGPATPSPKWA-PTPPAATPPS---PKGGPATPS 981
Query: 173 PDNAEAPETLALHNPTAKAVSFHTKSAFHTPGY--PWKAGSPFLPPEFPHKISSTKGLGA 230
P A P +P + K A P P GSP P FP S+
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP-FPKGASTPPAATP 1040
Query: 231 ISPYMHPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGP 290
SP P P G T + L SP+ S+ G P P P
Sbjct: 1041 PSPKGSPAATPLP------KGAPTTPAATL---PSPKGGPATPSLKGAPTPPAATP---P 1088
Query: 291 IPKHLAPSPATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGL-TRDQSSHL 349
PK +P+ P P+P P GL PP G T ++
Sbjct: 1089 SPKGGPATPS-----------PKGAPMPPAATPPS---PKGGLATPPHKGAPTTPAATPP 1134
Query: 350 LEEATLVYPASSPSRLNP-SDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAA 408
+ L P + P + P +P P+ ++ A + SP+ G A
Sbjct: 1135 SPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPA------ATPPSPK-GGLA 1187
Query: 409 TGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQ 468
T SP + +PT T + +G + + PP P K PA
Sbjct: 1188 TPSP-KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246
Query: 469 AAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPS------SPDDSSGMGPLNLSKKSEI 522
+ P + P P G+ + + PS +P P ++ S
Sbjct: 1247 TPPSPKGGPAT--------PPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK 1298
Query: 523 NLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAE--PAAA 580
AT P +G+P A+ + P P P P P+ PA
Sbjct: 1299 GGPATSPP--KGAPTPPAATPPSPKGSP---GTPPPKGAPTPPAVTPPSPKGTPTLPATT 1353
Query: 581 VPQKTG--TEGSEDGPSHPETKPGSLDGDGAPPTGP 614
K G T S++GP+ P P G P P
Sbjct: 1354 PSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSP 1389
Score = 42.4 bits (98), Expect = 0.002
Identities = 126/560 (22%), Positives = 179/560 (31%), Gaps = 95/560 (16%)
Query: 141 PAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNPTAKAVSFHTKSAF 200
P+P+ + A P +GA+ P A P P + A L PT A + +
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATP------PSPKGSPAATPLPKGAPTTPAATLPSPKG- 1069
Query: 201 HTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYTEHGLATIYSPYL 260
P P G+P P P S G SP P P P + GLAT P+
Sbjct: 1070 -GPATPSLKGAPTPPAATPP--SPKGGPATPSPKGAPMPPAATPP-SPKGGLAT--PPHK 1123
Query: 261 LAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQYPSNLPIPYG 320
A ++P P P+ L P PK +PA + P P G
Sbjct: 1124 GAPTTPAATPP--------SPKGGLATPP--PKGAPTTPA------------ATPPSPKG 1161
Query: 321 FYRPESAFSSYGLRLPPVTGL-TRDQSSHLLEEATLVYPASSPSRLNP-SDPNRKHVEFE 378
GL PP G T ++ + L P+ + P + P
Sbjct: 1162 -----------GLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLA 1210
Query: 379 SPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAA 438
+P P+ ++ A + SP+ G AT SP + +PT T + +G A
Sbjct: 1211 TPSPKGAPTTPA------ATPPSPK-GGLATPSP-KGAPTTPAATPPSPKG-----GPAT 1257
Query: 439 SSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVS 498
G PP A P K P + G +P A
Sbjct: 1258 PPPKGAPTPP----AATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 499 EAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDP 558
A P SP S G P K A P+ +G+P + S + P S K+
Sbjct: 1314 AATPPSPKGSPGTPP----PKGAPTPPAVTPPSPKGTPTLPATTPSS-KGGPTTPSSKEG 1368
Query: 559 CNTQAPRPAFPGRPRAAEPA----AAVPQKTGTEGS--------EDGPSHPETKPGSL-- 604
A P+ G P P+ A+P G S + P+ P T+ G+
Sbjct: 1369 PTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATP 1428
Query: 605 -DGDGAPPT--------GPGEEAPDACAVDSSEEQKQT--AAVALCQLAAYSPRNIRVGD 653
GD PP P AP S + T A +P+ +
Sbjct: 1429 SKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSS 1488
Query: 654 GDAAAPEPACRQDTPTLSSM 673
AP PTL ++
Sbjct: 1489 SPKKAPATPAPMGAPTLPAV 1508
Score = 41.6 bits (96), Expect = 0.003
Identities = 127/601 (21%), Positives = 183/601 (30%), Gaps = 65/601 (10%)
Query: 133 HRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGP----DNAEAPETLALHNPT 188
H+ P +P A P+ +G A +P+ + + A P L P
Sbjct: 1378 HKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Query: 189 AKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYT 248
VS A P G P P S+KG + P + P P+ PP
Sbjct: 1438 VTPVSLKKAPATSAP-----KGGPATP--------SSKGDPTL-PAVTPPSPKEPP---A 1480
Query: 249 EHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFF 308
+AT SP + AP L P+ P +AP+
Sbjct: 1481 PKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPA 1540
Query: 309 QQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPASSPSRLNPS 368
P IP P S + + P T ASSP + PS
Sbjct: 1541 TLAPKEALIPPAMTVP-SPKKTPAIPTPKEAPATPSSKE-----------ASSPPAVTPS 1588
Query: 369 DPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPR-----AGSAATGSPGRPSPT-DFMQ 422
E IP A S + T + P A A G+P P T ++
Sbjct: 1589 TYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLK 1648
Query: 423 TSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFR-----PVKKSTECL--PAQAAETTAE 475
S T A + P ++ TA + P +ST + P + T +
Sbjct: 1649 DSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKK 1708
Query: 476 SPVSLNVVNGDPPAPTGSASLVSEAAPS-----SPDDSSGMGPLNLSKKSEINLAATHEP 530
S + + DP A GS +S AP+ D S + S + LA P
Sbjct: 1709 SSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLA---PP 1765
Query: 531 TYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGS 590
+ S A+F ++ P + SV + AP P P A P +P K S
Sbjct: 1766 ESKASTPLTAAAFEKVLPKPESASV-----SAAPSPPV-SLPLAPSPVPTLPPKQQFLPS 1819
Query: 591 EDG--PSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRN 648
G P D D P P E S T A + S +
Sbjct: 1820 SPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQ 1879
Query: 649 IRVGDGDAAAPEPACRQDTPTLSSMESQEA---QCDLRPKGQKRTSLRDAGKSQQGAKKA 705
+ + E + P L +S +A Q L + K + KKA
Sbjct: 1880 PVTKNNKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKA 1939
Query: 706 K 706
+
Sbjct: 1940 R 1940
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 50.4 bits (119), Expect = 6e-06
Identities = 152/680 (22%), Positives = 215/680 (31%), Gaps = 111/680 (16%)
Query: 12 PHYIPRP----PGKPFKYKCFQCPFTCN----EKSHLFNHMKYGLCKNSITLVSEQDRVP 63
PH + P P P Q + + +H F M + S+T S P
Sbjct: 392 PHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTP 451
Query: 64 ------KCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAR---EDIKEN 114
+ P S P P SS + L A S HS I
Sbjct: 452 PDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPP 511
Query: 115 LELQARGTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPD 174
LE Q+ L PA P ++ P A P L+ A+ P + P
Sbjct: 512 LETQSSLAPPSLQTPPASLTTPPLEN-LPSLA---PPPLQTASAPLTTPHLETPPCPAPC 567
Query: 175 NAEAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPY 234
+AP + P T S+ TP PP+ P ++S G SP
Sbjct: 568 PLQAPPSPLTTPPP------ETPSSIATP-----------PPQAPPALASPPLQGLPSPP 610
Query: 235 MHPTI---PEYPPHFYTEHGLATIYSPYLLAGSSPECDAPL--LSVYGTQDPRHFLPHPG 289
+ P P+ PP + P L A SP PL L+ Q P H
Sbjct: 611 LSPLATPPPQAPPX---------LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 661
Query: 290 PIPKHLAPSPATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYG---LRLPPVTGLTRDQS 346
P PSP + P++ P+ P A S L++PP
Sbjct: 662 QAPFSPPPSPPVQAPF----SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP------- 710
Query: 347 SHLLEEATLVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGS 406
PAS P + + P + +P + S A + + PR
Sbjct: 711 -----------PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759
Query: 407 AATGSPGR--PSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTEC 464
P + PSP + S + A+ L L P S P S
Sbjct: 760 LLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 819
Query: 465 LPAQAAETTAESPVSLNV-VNGDPPAPTGSASLVSEAAPSSPD-DSSGMGP-LNLS---- 517
+ A ++P L + PP+P S +L + P +P D+S GP L L+
Sbjct: 820 PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 879
Query: 518 ---KKSEINLAATHEPTYQGSPQAETASFSELQDL---PLNLSVKDP--------CNTQA 563
S + P G + T++ EL+ P + P C+ A
Sbjct: 880 PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA 939
Query: 564 ------PRPAFPGRPRAAEPAAAVPQKTGTEG-----SEDGPSHPETKPGSLDGDGAPPT 612
P AF G P A P +G +GP PG+LD +P T
Sbjct: 940 WSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGT 999
Query: 613 GPGEEAPDACAVDSSEEQKQ 632
G+ A A A SS KQ
Sbjct: 1000 SGGKAAAGAGAGASSRSPKQ 1019
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 50.1 bits (118), Expect = 7e-06
Identities = 116/594 (19%), Positives = 196/594 (32%), Gaps = 57/594 (9%)
Query: 63 PKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQARGT 122
PK + ++P+ + P++ +S +V N + ++K ++ ++ + E
Sbjct: 116 PKITTAKPINPRPSLPPNSDTSKETSLTV-NKETTVETKETTTTNKQTSTDGKEKTTSAK 174
Query: 123 HRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETL 182
+K + +P + A+ +G A + P P + P +
Sbjct: 175 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPT-------PTTPKEPAST 227
Query: 183 ALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLP--PEFPHKISSTKGLGAISPYMHPTIP 240
PT + KSA TP P + P P+ P ++ + PT
Sbjct: 228 TPKEPTPTTI----KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 283
Query: 241 EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGPI-PKHLAPS 298
+ P T+ T P A ++P+ AP ++P P P P PK P+
Sbjct: 284 KEPAPTTTKSAPTTPKEP---APTTPKKPAPTTP----KEPAPTTPKEPTPTTPKE--PA 334
Query: 299 PATYDHYRFFQQYPS----NLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEAT 354
P T + + P+ P P P P T++ S +E
Sbjct: 335 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK-----EPAPTTTKEPSPTTPKEPA 389
Query: 355 LVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGR 414
S+P+ P +P + ++K T A +P
Sbjct: 390 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 449
Query: 415 PSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTA 474
P+PT + + T + K A + P TA KK T P + A TT
Sbjct: 450 PAPTTPKEPAPTT------TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 503
Query: 475 ESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQG 534
E P P P E P++P++ + P + + A T
Sbjct: 504 EKPAPTTPEELAPTTP-------EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 556
Query: 535 SPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQK-TGTEGSEDG 593
+ E A + + P P + P P P +P E A ++ T T +
Sbjct: 557 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 616
Query: 594 PSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPR 647
P+ P+ G PT P E AP + K TA L + A +P+
Sbjct: 617 PTTPK---------GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK 661
Score = 39.3 bits (90), Expect = 0.013
Identities = 143/705 (20%), Positives = 217/705 (30%), Gaps = 72/705 (10%)
Query: 55 LVSEQDRVPKCPKSN-SLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKE 113
L + ++ P PK S PK+ + P + K A + A KE
Sbjct: 210 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE 269
Query: 114 NLELQARGTHRCLGQKPA--LHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLK 171
+ ++PA +++P P +PA P+ P
Sbjct: 270 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 329
Query: 172 GPDNAEAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAI 231
+ A + A P A + K A TP P +P P E P ++ +
Sbjct: 330 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP----APTTPKE-PAPTTTKEP---- 380
Query: 232 SPYMHPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGP 290
PT P+ P T+ T P S S T++P P P P
Sbjct: 381 ----SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 436
Query: 291 I-PKHLAPS-PATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSH 348
PK AP+ P + P+ P E A ++ P +
Sbjct: 437 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 496
Query: 349 LLEEATLVYPA-SSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSA 407
L T PA ++P L P+ P +P A + KA +T
Sbjct: 497 KLAPTTPEKPAPTTPEELAPTTPEEPTPT--TPEEPAPTTPKAAAPNTPKEPAPTTPKEP 554
Query: 408 ATGSPGRPSPTDFMQTSQTC-EGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTEC-- 464
A +P P+PT +T+ T +G + K + + P++ ST C
Sbjct: 555 APTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDK 614
Query: 465 ----LPAQAAETTAESPVSLNVVNGDPPAPTGSA-SLVSEAAPSSPDD--------SSGM 511
P A TT + P P P G+A + + E AP++P ++
Sbjct: 615 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 674
Query: 512 GPLNL-SKKSEINLAATHEPTYQGSPQAET----ASFSELQDLPLNLSVKDPCNTQAPR- 565
GP + S K PT P T A + P V P T+ P
Sbjct: 675 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 734
Query: 566 ------------------------PAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKP 601
P PG P PAA P+ T T + T P
Sbjct: 735 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP 794
Query: 602 GSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEP 661
+ A P E A S+ T V +P I AP+
Sbjct: 795 ---ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKV 851
Query: 662 ACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAK 706
+ T T + + ++ + +PK + S K Q+ K K
Sbjct: 852 TTTKKTITTTEIMNKPEE-TAKPKDRATNSKATTPKPQKPTKAPK 895
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 50.1 bits (118), Expect = 7e-06
Identities = 116/594 (19%), Positives = 196/594 (32%), Gaps = 57/594 (9%)
Query: 63 PKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQARGT 122
PK + ++P+ + P++ +S +V N + ++K ++ ++ + E
Sbjct: 157 PKITTAKPINPRPSLPPNSDTSKETSLTV-NKETTVETKETTTTNKQTSTDGKEKTTSAK 215
Query: 123 HRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETL 182
+K + +P + A+ +G A + P P + P +
Sbjct: 216 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPT-------PTTPKEPAST 268
Query: 183 ALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLP--PEFPHKISSTKGLGAISPYMHPTIP 240
PT + KSA TP P + P P+ P ++ + PT
Sbjct: 269 TPKEPTPTTI----KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 324
Query: 241 EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGPI-PKHLAPS 298
+ P T+ T P A ++P+ AP ++P P P P PK P+
Sbjct: 325 KEPAPTTTKSAPTTPKEP---APTTPKKPAPTTP----KEPAPTTPKEPTPTTPKE--PA 375
Query: 299 PATYDHYRFFQQYPS----NLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEAT 354
P T + + P+ P P P P T++ S +E
Sbjct: 376 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK-----EPAPTTTKEPSPTTPKEPA 430
Query: 355 LVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGR 414
S+P+ P +P + ++K T A +P
Sbjct: 431 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 490
Query: 415 PSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTA 474
P+PT + + T + K A + P TA KK T P + A TT
Sbjct: 491 PAPTTPKEPAPTT------TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 544
Query: 475 ESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQG 534
E P P P E P++P++ + P + + A T
Sbjct: 545 EKPAPTTPEELAPTTP-------EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 597
Query: 535 SPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQK-TGTEGSEDG 593
+ E A + + P P + P P P +P E A ++ T T +
Sbjct: 598 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 657
Query: 594 PSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPR 647
P+ P+ G PT P E AP + K TA L + A +P+
Sbjct: 658 PTTPK---------GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK 702
Score = 39.3 bits (90), Expect = 0.013
Identities = 143/705 (20%), Positives = 217/705 (30%), Gaps = 72/705 (10%)
Query: 55 LVSEQDRVPKCPKSN-SLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKE 113
L + ++ P PK S PK+ + P + K A + A KE
Sbjct: 251 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE 310
Query: 114 NLELQARGTHRCLGQKPA--LHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLK 171
+ ++PA +++P P +PA P+ P
Sbjct: 311 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 370
Query: 172 GPDNAEAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAI 231
+ A + A P A + K A TP P +P P E P ++ +
Sbjct: 371 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP----APTTPKE-PAPTTTKEP---- 421
Query: 232 SPYMHPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGP 290
PT P+ P T+ T P S S T++P P P P
Sbjct: 422 ----SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 477
Query: 291 I-PKHLAPS-PATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSH 348
PK AP+ P + P+ P E A ++ P +
Sbjct: 478 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Query: 349 LLEEATLVYPA-SSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSA 407
L T PA ++P L P+ P +P A + KA +T
Sbjct: 538 KLAPTTPEKPAPTTPEELAPTTPEEPTPT--TPEEPAPTTPKAAAPNTPKEPAPTTPKEP 595
Query: 408 ATGSPGRPSPTDFMQTSQTC-EGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTEC-- 464
A +P P+PT +T+ T +G + K + + P++ ST C
Sbjct: 596 APTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDK 655
Query: 465 ----LPAQAAETTAESPVSLNVVNGDPPAPTGSA-SLVSEAAPSSPDD--------SSGM 511
P A TT + P P P G+A + + E AP++P ++
Sbjct: 656 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 715
Query: 512 GPLNL-SKKSEINLAATHEPTYQGSPQAET----ASFSELQDLPLNLSVKDPCNTQAPR- 565
GP + S K PT P T A + P V P T+ P
Sbjct: 716 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 775
Query: 566 ------------------------PAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKP 601
P PG P PAA P+ T T + T P
Sbjct: 776 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP 835
Query: 602 GSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEP 661
+ A P E A S+ T V +P I AP+
Sbjct: 836 ---ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKV 892
Query: 662 ACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAK 706
+ T T + + ++ + +PK + S K Q+ K K
Sbjct: 893 TTTKKTITTTEIMNKPEE-TAKPKDRATNSKATTPKPQKPTKAPK 936
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 50.1 bits (118), Expect = 7e-06
Identities = 116/594 (19%), Positives = 196/594 (32%), Gaps = 57/594 (9%)
Query: 63 PKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQARGT 122
PK + ++P+ + P++ +S +V N + ++K ++ ++ + E
Sbjct: 209 PKITTAKPINPRPSLPPNSDTSKETSLTV-NKETTVETKETTTTNKQTSTDGKEKTTSAK 267
Query: 123 HRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETL 182
+K + +P + A+ +G A + P P + P +
Sbjct: 268 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPT-------PTTPKEPAST 320
Query: 183 ALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLP--PEFPHKISSTKGLGAISPYMHPTIP 240
PT + KSA TP P + P P+ P ++ + PT
Sbjct: 321 TPKEPTPTTI----KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 376
Query: 241 EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGPI-PKHLAPS 298
+ P T+ T P A ++P+ AP ++P P P P PK P+
Sbjct: 377 KEPAPTTTKSAPTTPKEP---APTTPKKPAPTTP----KEPAPTTPKEPTPTTPKE--PA 427
Query: 299 PATYDHYRFFQQYPS----NLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEAT 354
P T + + P+ P P P P T++ S +E
Sbjct: 428 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK-----EPAPTTTKEPSPTTPKEPA 482
Query: 355 LVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGR 414
S+P+ P +P + ++K T A +P
Sbjct: 483 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 542
Query: 415 PSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTA 474
P+PT + + T + K A + P TA KK T P + A TT
Sbjct: 543 PAPTTPKEPAPTT------TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 596
Query: 475 ESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQG 534
E P P P E P++P++ + P + + A T
Sbjct: 597 EKPAPTTPEELAPTTP-------EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 649
Query: 535 SPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQK-TGTEGSEDG 593
+ E A + + P P + P P P +P E A ++ T T +
Sbjct: 650 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 709
Query: 594 PSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPR 647
P+ P+ G PT P E AP + K TA L + A +P+
Sbjct: 710 PTTPK---------GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK 754
Score = 39.3 bits (90), Expect = 0.013
Identities = 143/705 (20%), Positives = 217/705 (30%), Gaps = 72/705 (10%)
Query: 55 LVSEQDRVPKCPKSN-SLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKE 113
L + ++ P PK S PK+ + P + K A + A KE
Sbjct: 303 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE 362
Query: 114 NLELQARGTHRCLGQKPA--LHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLK 171
+ ++PA +++P P +PA P+ P
Sbjct: 363 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 422
Query: 172 GPDNAEAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAI 231
+ A + A P A + K A TP P +P P E P ++ +
Sbjct: 423 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP----APTTPKE-PAPTTTKEP---- 473
Query: 232 SPYMHPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGP 290
PT P+ P T+ T P S S T++P P P P
Sbjct: 474 ----SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 529
Query: 291 I-PKHLAPS-PATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSH 348
PK AP+ P + P+ P E A ++ P +
Sbjct: 530 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 589
Query: 349 LLEEATLVYPA-SSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSA 407
L T PA ++P L P+ P +P A + KA +T
Sbjct: 590 KLAPTTPEKPAPTTPEELAPTTPEEPTPT--TPEEPAPTTPKAAAPNTPKEPAPTTPKEP 647
Query: 408 ATGSPGRPSPTDFMQTSQTC-EGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTEC-- 464
A +P P+PT +T+ T +G + K + + P++ ST C
Sbjct: 648 APTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDK 707
Query: 465 ----LPAQAAETTAESPVSLNVVNGDPPAPTGSA-SLVSEAAPSSPDD--------SSGM 511
P A TT + P P P G+A + + E AP++P ++
Sbjct: 708 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 767
Query: 512 GPLNL-SKKSEINLAATHEPTYQGSPQAET----ASFSELQDLPLNLSVKDPCNTQAPR- 565
GP + S K PT P T A + P V P T+ P
Sbjct: 768 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 827
Query: 566 ------------------------PAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKP 601
P PG P PAA P+ T T + T P
Sbjct: 828 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP 887
Query: 602 GSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEP 661
+ A P E A S+ T V +P I AP+
Sbjct: 888 ---ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKV 944
Query: 662 ACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAK 706
+ T T + + ++ + +PK + S K Q+ K K
Sbjct: 945 TTTKKTITTTEIMNKPEE-TAKPKDRATNSKATTPKPQKPTKAPK 988
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 50.1 bits (118), Expect = 7e-06
Identities = 116/594 (19%), Positives = 196/594 (32%), Gaps = 57/594 (9%)
Query: 63 PKCPKSNSLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLELQARGT 122
PK + ++P+ + P++ +S +V N + ++K ++ ++ + E
Sbjct: 250 PKITTAKPINPRPSLPPNSDTSKETSLTV-NKETTVETKETTTTNKQTSTDGKEKTTSAK 308
Query: 123 HRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETL 182
+K + +P + A+ +G A + P P + P +
Sbjct: 309 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPT-------PTTPKEPAST 361
Query: 183 ALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLP--PEFPHKISSTKGLGAISPYMHPTIP 240
PT + KSA TP P + P P+ P ++ + PT
Sbjct: 362 TPKEPTPTTI----KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 417
Query: 241 EYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGPI-PKHLAPS 298
+ P T+ T P A ++P+ AP ++P P P P PK P+
Sbjct: 418 KEPAPTTTKSAPTTPKEP---APTTPKKPAPTTP----KEPAPTTPKEPTPTTPKE--PA 468
Query: 299 PATYDHYRFFQQYPS----NLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEAT 354
P T + + P+ P P P P T++ S +E
Sbjct: 469 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK-----EPAPTTTKEPSPTTPKEPA 523
Query: 355 LVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGR 414
S+P+ P +P + ++K T A +P
Sbjct: 524 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 583
Query: 415 PSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTA 474
P+PT + + T + K A + P TA KK T P + A TT
Sbjct: 584 PAPTTPKEPAPTT------TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 637
Query: 475 ESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQG 534
E P P P E P++P++ + P + + A T
Sbjct: 638 EKPAPTTPEELAPTTP-------EEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 690
Query: 535 SPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQK-TGTEGSEDG 593
+ E A + + P P + P P P +P E A ++ T T +
Sbjct: 691 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 750
Query: 594 PSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPR 647
P+ P+ G PT P E AP + K TA L + A +P+
Sbjct: 751 PTTPK---------GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK 795
Score = 39.3 bits (90), Expect = 0.013
Identities = 143/705 (20%), Positives = 217/705 (30%), Gaps = 72/705 (10%)
Query: 55 LVSEQDRVPKCPKSN-SLDPKQTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKE 113
L + ++ P PK S PK+ + P + K A + A KE
Sbjct: 344 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE 403
Query: 114 NLELQARGTHRCLGQKPA--LHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLK 171
+ ++PA +++P P +PA P+ P
Sbjct: 404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Query: 172 GPDNAEAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAI 231
+ A + A P A + K A TP P +P P E P ++ +
Sbjct: 464 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP----APTTPKE-PAPTTTKEP---- 514
Query: 232 SPYMHPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLP-HPGP 290
PT P+ P T+ T P S S T++P P P P
Sbjct: 515 ----SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Query: 291 I-PKHLAPS-PATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSH 348
PK AP+ P + P+ P E A ++ P +
Sbjct: 571 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 630
Query: 349 LLEEATLVYPA-SSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSA 407
L T PA ++P L P+ P +P A + KA +T
Sbjct: 631 KLAPTTPEKPAPTTPEELAPTTPEEPTPT--TPEEPAPTTPKAAAPNTPKEPAPTTPKEP 688
Query: 408 ATGSPGRPSPTDFMQTSQTC-EGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTEC-- 464
A +P P+PT +T+ T +G + K + + P++ ST C
Sbjct: 689 APTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDK 748
Query: 465 ----LPAQAAETTAESPVSLNVVNGDPPAPTGSA-SLVSEAAPSSPDD--------SSGM 511
P A TT + P P P G+A + + E AP++P ++
Sbjct: 749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 808
Query: 512 GPLNL-SKKSEINLAATHEPTYQGSPQAET----ASFSELQDLPLNLSVKDPCNTQAPR- 565
GP + S K PT P T A + P V P T+ P
Sbjct: 809 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 868
Query: 566 ------------------------PAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKP 601
P PG P PAA P+ T T + T P
Sbjct: 869 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP 928
Query: 602 GSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEP 661
+ A P E A S+ T V +P I AP+
Sbjct: 929 ---ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKV 985
Query: 662 ACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAK 706
+ T T + + ++ + +PK + S K Q+ K K
Sbjct: 986 TTTKKTITTTEIMNKPEE-TAKPKDRATNSKATTPKPQKPTKAPK 1029
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.8 bits (112), Expect = 4e-05
Identities = 128/537 (23%), Positives = 178/537 (33%), Gaps = 126/537 (23%)
Query: 135 ASPCKSPAPEAALGAQ--PALEGAARPSAFV-PVGEHRLKGPDNAEAPETL-ALHNPTAK 190
+SP +P+P AAL +Q P L S+ + P + AP +L L +P A
Sbjct: 301 SSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPAT 360
Query: 191 AVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYTEH 250
S T S GSP L + H + L SP P P+ PP
Sbjct: 361 PPSQATTSL----------GSPTL--QATHSFLPSPPL---SPLATPP-PQAPP------ 398
Query: 251 GLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQ 310
+ P L A SP PL S T P+ P + HL +P +
Sbjct: 399 ---ALALPPLQAPPSPPASPPL-SPLATPSPQA----PNALAVHLLQAPFSP-------- 442
Query: 311 YPSNLPIPYGFYRPESAFSSYGLRLPPVT--GLTRDQSSHLLEEATLVYPASSPSRLNPS 368
P + P+ F P S PPV+ Q+ L L P S P+ P
Sbjct: 443 -PPSPPVQAPFSPPAS---------PPVSPSATPPSQAPPSLAAPPLQVPPSPPAS-PPM 491
Query: 369 DPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQTCE 428
P+ +P P+A A +K P+A A P + P+ +
Sbjct: 492 SPSA------TPPPQAPPPLAAPPLQL--AKPPPQAPPALATPPLQALPSP----PASFP 539
Query: 429 GLYDLSNKAASSALGRLYPPEQSLTAFR-------------PVKKSTECLPAQAAETTAE 475
G S A+ PP Q+ P ++ P +T+
Sbjct: 540 GQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVS 599
Query: 476 SP-VSLNVVNGDPPAPTGSASLV---------SEAAPSSPD-----DSSGMGPLNLSKKS 520
P ++L + G PP P+ S S S +A S+P+ DS G S
Sbjct: 600 GPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP 659
Query: 521 EINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAA 580
+ LAA H + P AP AF G P A P
Sbjct: 660 DAELAACHPAAWSRGP--------------------------APPLAFRGAPGAPLPWPP 693
Query: 581 VPQKTGTEG-----SEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQ 632
+G +GP PG+LD +P T G+ A A A SS KQ
Sbjct: 694 ATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQ 750
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 47.8 bits (112), Expect = 4e-05
Identities = 82/376 (21%), Positives = 130/376 (34%), Gaps = 67/376 (17%)
Query: 370 PNRKHVEFESPIPEAKDSSKAGQRDTEG--SKMSPRAGSAATGSPGRPSPTDFMQTSQTC 427
P RK E + ++ K ++ G S + P + S G P ++ Q
Sbjct: 260 PTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPV 319
Query: 428 EGLYDLSNKAASSALGRLYPPEQSL-----TAFRPVKKSTEC--------------LPAQ 468
E D S+++ SS+ PP +++ T P KK+ E P++
Sbjct: 320 ESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSK 379
Query: 469 AAETTAESPVSLNVVNGDP----------PAPTGSASLVSEAAPSSPDDSSGMGPLNLSK 518
A TT S V P P G L +A SS ++ S +K
Sbjct: 380 PAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTK 439
Query: 519 K------------SEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRP 566
K + ++L A P QGS + + S S + + K + +
Sbjct: 440 KMVATTKPKATAKAALSLPAKQAP--QGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKV 497
Query: 567 AFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAP-PTGPGEEAPDACAV- 624
A P ++PA+A K + S E + L G G+P P P A
Sbjct: 498 AGGAAP--SKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQ 555
Query: 625 --------DSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQDTPTLSSMESQ 676
+ EE+K+ AAV + + + R E A +TP ++ Q
Sbjct: 556 NGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRK---------QNEAAKEAETPQAKKIKLQ 606
Query: 677 EAQC-DLRPKGQKRTS 691
R KG+KR S
Sbjct: 607 TPNTFPKRKKGEKRAS 622
Score = 36.2 bits (82), Expect = 0.11
Identities = 79/368 (21%), Positives = 140/368 (38%), Gaps = 51/368 (13%)
Query: 312 PSNL-PIPYGFYRPESAFSSYGLRLPPVTGLTRDQS--SHLLEEATL-VYPASSPSR-LN 366
PS+L P+ GF R ++ S + TG T+ + S LL+ + + A P R L
Sbjct: 11 PSDLYPLVLGFLR-DNQLSEVANKFAKATGATQQDANASSLLDIYSFWLKSAKVPERKLQ 69
Query: 367 PSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAA-TGSPGRPSPTDFMQTSQ 425
+ P K + ++ +++DSS+ + + +G A A G P + ++S
Sbjct: 70 ANGPVAKKAKKKASSSDSEDSSEE-EEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSS 128
Query: 426 TCEGLYD----------LSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAE 475
+ E D + A PP+++ ++ S+E P + +
Sbjct: 129 SEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKI- 187
Query: 476 SPVSLNVVNGDPPAPTGSA----------SLVSEAAPSSPDDSSGMGPLNLSKK------ 519
+PV++ PP P +A S S ++ SS DDS KK
Sbjct: 188 TPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQ 247
Query: 520 --SEINLAATHEPTYQGSPQAETASFSE------LQDLPLNLSVKDPCNTQAPRPAFPGR 571
++ + A PT + S +++S E +++ P S P + P+ + +
Sbjct: 248 VVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQ 307
Query: 572 P--RAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGP------GEEAPDACA 623
P +A E V + D S E KP + T P E + D+
Sbjct: 308 PPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSD 367
Query: 624 VDSSEEQK 631
DSSE+ +
Sbjct: 368 SDSSEDDE 375
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 47.4 bits (111), Expect = 5e-05
Identities = 77/347 (22%), Positives = 125/347 (36%), Gaps = 78/347 (22%)
Query: 310 QYPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLE-EATLVYPAS-------- 360
Q S P G Y+ ++ ++PP G + Q S L+E EAT + P+S
Sbjct: 783 QSNSRSSAPMGIYQKQNL-----TKIPP-RGKSSPQKSKLMEPEATTLLPSSGLVTLEKS 836
Query: 361 ---SPSRLNP--------------SDPN-RKH---VEFESPIPEAKDSSKAGQRDTEGSK 399
+P +L+ SDP+ KH + S +P +D + + T GS+
Sbjct: 837 PALAPGKLSRFMKTESSGPLFELRSDPHIPKHSAQLPHSSRMPSRRDWVQCPKSQTPGSR 896
Query: 400 MSPRAGSAATGSPGR-----------------PSPTDFMQTSQTCEGLYDLSNKAASSAL 442
P S+ +G P P P S YD S +S+
Sbjct: 897 SRPAIESSDSGEPPTRDEHCGSGPEAGVKSPSPPPPPGRSVSLLARPSYDYSPAPSSTKS 956
Query: 443 GRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDP-----------PAPT 491
P E + T F+ + L +A + +P + V P P P+
Sbjct: 957 ETRVPSETARTPFK-----SPLLKGISAPVISSNPATTEVQRKKPSVAFKKPIFTHPMPS 1011
Query: 492 GSASLVSEA---APSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQD 548
A + + APSS +GP +S K + + + G+PQ + LQ
Sbjct: 1012 PEAVIQTRCPAHAPSSSFTVMALGPPKVSPKRGVPKTSPRQTL--GTPQRDIG----LQT 1065
Query: 549 LPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPS 595
++ S +P + + PGR +A+ P K G + PS
Sbjct: 1066 PRISPSTHEPLEMTSSKSVSPGRKGQLNDSASTPPKPSFLGVNESPS 1112
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 47.4 bits (111), Expect = 5e-05
Identities = 100/465 (21%), Positives = 156/465 (33%), Gaps = 92/465 (19%)
Query: 204 GYPWKAGSPFL----PPEFPHKIS----STKGLGAISPYMHPTIPEYPPHFYTEHGLATI 255
G+ + G P L PP FP ++ S L +P +P P H LA +
Sbjct: 834 GHSYGLGHPALHQNLPPGFPASVAGPVPSVFPLPQDAPTQLVILPSEPTPHSAPHALADV 893
Query: 256 YSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQYPS-- 313
L +YG + P + HPG +P + P QQ +
Sbjct: 894 MDQASLWPP----------MYGGRGPASHMQHPGQLPVYSRPQLLRQQELYALQQQRAAQ 943
Query: 314 ----------NLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPASSPS 363
+L P P+S L P G PA+ P+
Sbjct: 944 FQRKPEDQHLDLEEPAQEKAPKSTHKPVALT-PTAPGAPS--------------PAAGPT 988
Query: 364 RLNPS-DPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSP----RAGSAATGSPGRPSPT 418
+L P P SP P + S+ S P R+ G G+ S
Sbjct: 989 KLPPCCHPPDPKPPASSPTPPPRPSAPCTLNVCPASSPGPGSRVRSAEEKNGE-GQQSTA 1047
Query: 419 DFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPV 478
D + + P+ RP+ LP+ + E P
Sbjct: 1048 DIITSE-----------------------PDLPPGYLRPMAGLGFSLPSDVHSSNLEDPE 1084
Query: 479 SLNVVN-GDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQ 537
++ G P PT + L E P SP G L+ ++++ +LAAT PT +G PQ
Sbjct: 1085 TMQTTAPGAQPEPTRTF-LPGEPPPCSPRSLEEPGLLSGAREATQDLAATPYPTERG-PQ 1142
Query: 538 AETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHP 597
+ A S L+ L ++ +A P G+ + + A ++ E E GPS
Sbjct: 1143 GKAADPSPLEGLQ---ELQCAALLEAGGPEATGQAHSTQGGAR--EERSREEGEQGPSSG 1197
Query: 598 ET---------KPGSLDGDGAPPTGPGEE-APDACAVDSSEEQKQ 632
+ PG+L+ +G P +E D S E+ ++
Sbjct: 1198 ASSQVLEQRAGSPGALEDEGEQPAPEEDELEEDELGQQSMEDSEE 1242
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 46.2 bits (108), Expect = 1e-04
Identities = 61/233 (26%), Positives = 81/233 (34%), Gaps = 28/233 (12%)
Query: 488 PAPTGS-ASLVSEAAPSSPDDSSGMGPLNLSKKSEIN------LAATHEPTYQGSPQ-AE 539
P P GS A V AP P ++ P+ L E A T P +P A
Sbjct: 23 PPPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPGSAETSAPAPAPAPAPAP 82
Query: 540 TASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTE--GSEDGPSHP 597
+ S + L L S +AP+P P P + EPAA +T D P
Sbjct: 83 AVTGSTVVVLTLEAS------PEAPKPQLPSGPESPEPAAVAGVETSRALAAGADSPKTE 136
Query: 598 ETKPGSLDGDGAP---PTG-PGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGD 653
E +P G G P PT P AP A K VA A + + G
Sbjct: 137 EARPSPAPGPGTPTGTPTRTPSRTAPGALTAKPPLAPKPGTTVASGVTARSASGQVTGGH 196
Query: 654 GDAA--------APEPACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKS 698
G AA APE T + E+ A + P + + +D G +
Sbjct: 197 GAAAATSASAGQAPEDPSGPGTGPSGTCEAPVAVVTVTPAPEPAENSQDLGST 249
Score = 33.1 bits (74), Expect = 0.93
Identities = 48/180 (26%), Positives = 65/180 (36%), Gaps = 47/180 (26%)
Query: 336 PPVTGLTRDQSSHLLEEATLVYPASSPSRLNPSDPNRKHVEFESPIPEAK---DSSKAGQ 392
P VTG T + TL +P PS P ESP P A ++S+A
Sbjct: 82 PAVTGST-------VVVLTLEASPEAPKPQLPSGP-------ESPEPAAVAGVETSRALA 127
Query: 393 RDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSL 452
+ K S A G PG P+ T S+T G +L
Sbjct: 128 AGADSPKTEEARPSPAPG-PGTPTGTPTRTPSRTAPG---------------------AL 165
Query: 453 TAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMG 512
TA P+ A TT S V+ +G G+A+ S +A +P+D SG G
Sbjct: 166 TAKPPL--------APKPGTTVASGVTARSASGQVTGGHGAAAATSASAGQAPEDPSGPG 217
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 45.8 bits (107), Expect = 1e-04
Identities = 101/414 (24%), Positives = 152/414 (36%), Gaps = 68/414 (16%)
Query: 320 GFYRPESAFSS---YGLRLPPVTGLTRDQSSHLLEEATLVYPASSPSRLNPSDPNRKHV- 375
G+ P FSS +GL + L+R S E A P S+P NP P RK V
Sbjct: 1017 GYCSPAEGFSSRYEHGL----MKDLSRGSLSPGGERACEGVP-SAPQ--NP--PQRKKVS 1067
Query: 376 --EFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDL 433
E+ EAK++S G D+ SK ++ A GS S T G+
Sbjct: 1068 LLEYRKRKQEAKENSAGGGGDSAQSKS--KSAGAGQGSSNSVSDTG-------AHGVQGS 1118
Query: 434 SNKAASSALGRLYPPEQSLTAFRPVK-------KSTECLPAQAAETTAESPVSLNVVN-- 484
S + SS + P S++ V S+ C P + + P S+ +
Sbjct: 1119 SARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGTSSSHCRPQENISSRWMVPTSVERLREG 1178
Query: 485 GDPPAPTGSASLVSEAAPSSP-----------DDSSGMGPLNLSKKSEINLAAT-HEPT- 531
G P S+ V++ SP D + G GP LS S ++ AT + P+
Sbjct: 1179 GSIPKVLRSSVRVAQKGEPSPTWESNITEKDSDPADGEGPETLS--SALSKGATVYSPSR 1236
Query: 532 --YQ----GSPQAETASFSELQDLPLN-LSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQK 584
YQ SP+ E+ S + P + P + PG P P+ +
Sbjct: 1237 YSYQLLQCDSPRTESQSLLQQSSSPFRGHPTQSPGYSYRTTALRPGNP----PSHGSSES 1292
Query: 585 TGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAY 644
+ + S P+HP + G P G P + S +++ C +A
Sbjct: 1293 SLSSTSYSSPAHPVSTDSLAPFTGTP--GYFSSQPHSGNSTGSNLPRRS-----CPSSAA 1345
Query: 645 SPRNIRVGDGDAAAPEPACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKS 698
SP G D+ + + T TLSS + P + SL AG+S
Sbjct: 1346 SPT--LQGPSDSPTSDSVSQSSTGTLSSTSFPQNSRSSLPSDLRTISLPSAGQS 1397
Score = 33.9 bits (76), Expect = 0.54
Identities = 44/174 (25%), Positives = 61/174 (35%), Gaps = 22/174 (12%)
Query: 253 ATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQYP 312
AT+YSP + +CD+P T+ P H SP YR P
Sbjct: 1229 ATVYSPSRYSYQLLQCDSP-----RTESQSLLQQSSSPFRGHPTQSPGY--SYRTTALRP 1281
Query: 313 SNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPASSPSRLNPSDPNR 372
N P +G + +SY PV+ S T Y +S P N + N
Sbjct: 1282 GN-PPSHGSSESSLSSTSYSSPAHPVS-----TDSLAPFTGTPGYFSSQPHSGNSTGSN- 1334
Query: 373 KHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQT 426
+P S A +G SP + S + S G S T F Q S++
Sbjct: 1335 --------LPRRSCPSSAASPTLQGPSDSPTSDSVSQSSTGTLSSTSFPQNSRS 1380
Score = 33.5 bits (75), Expect = 0.71
Identities = 68/320 (21%), Positives = 113/320 (35%), Gaps = 51/320 (15%)
Query: 344 DQSSHLLEEATLVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTE------- 396
D +H ++ ++ P+S + +PS + H+E SP +++ +S + R E
Sbjct: 1109 DTGAHGVQGSSARTPSSPHKKFSPSHSSMSHLEAVSP-SDSRGTSSSHCRPQENISSRWM 1167
Query: 397 -----------GSKMSPRAGSAATGSPGRPSPT-DFMQTSQTCEGLYDLSNKAASSALGR 444
GS S G PSPT + T + + + SSAL +
Sbjct: 1168 VPTSVERLREGGSIPKVLRSSVRVAQKGEPSPTWESNITEKDSDPADGEGPETLSSALSK 1227
Query: 445 LYPPEQSLTAFRPVKKSTECLPAQAAETTAESPV--SLNVVNGDPPAPTGSASLVSEAAP 502
T + P + S + L + T ++S + S + G P G + + P
Sbjct: 1228 ------GATVYSPSRYSYQLLQCDSPRTESQSLLQQSSSPFRGHPTQSPGYSYRTTALRP 1281
Query: 503 SSPDDSSGMGPLNLSKKSEINLA----------ATHEPTYQGS-PQAETASFSELQDLPL 551
+P S G +LS S + A T P Y S P + ++ S L
Sbjct: 1282 GNP-PSHGSSESSLSSTSYSSPAHPVSTDSLAPFTGTPGYFSSQPHSGNSTGSNLP---- 1336
Query: 552 NLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETK-PGSLDGDGAP 610
+ C + A P G + + TGT S P + + P L P
Sbjct: 1337 ----RRSCPSSAASPTLQGPSDSPTSDSVSQSSTGTLSSTSFPQNSRSSLPSDLRTISLP 1392
Query: 611 PTGPGE--EAPDACAVDSSE 628
G +A AV +S+
Sbjct: 1393 SAGQSAVYQASRVSAVSNSQ 1412
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 45.4 bits (106), Expect = 2e-04
Identities = 141/594 (23%), Positives = 207/594 (34%), Gaps = 97/594 (16%)
Query: 129 KPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNPT 188
K AL A P SP ++ A PA EG A +A VP + + +L + T
Sbjct: 844 KDALDAALP--SPEEGTSIAAVPAPEGTAVVAALVPFPHEDIL----VASIVSLEEEDVT 897
Query: 189 AKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHP--TIPEYPPHF 246
A AVS P +A P + +S +G A++ P T P
Sbjct: 898 AAAVS-----------APERATVPAV------TVSVPEGTAAVAAVSSPEETAPAVAAAI 940
Query: 247 YTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPK----HLAPSPATY 302
T+ G++ + AG SPE A ++V T++ GP+ H P T
Sbjct: 941 -TQEGMSAV------AGFSPEWAALAITVPITEEDG---TPEGPVTPATTVHAPEEPDTA 990
Query: 303 DHYRFFQQYPSN----LPIPYGFYRPESAF------SSYGLRLPPVTGLTRDQSSHLLEE 352
+ P++ +P P P +A +S +PP T ++ E
Sbjct: 991 AVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPE 1050
Query: 353 ATLVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSP 412
A+ P+ P+ P P PE S A E P + +AA +P
Sbjct: 1051 EPTSPAAAVPTPEEPTSP-----AAAVPTPEEPTSPAAAVPTPE----EPTSPAAAVPTP 1101
Query: 413 GRP-SPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAE 471
P SP + T + + AS A P E + A PA A
Sbjct: 1102 EEPTSPAAAVPTPE----------EPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVP 1151
Query: 472 TTAESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPT 531
T ES + V P P SAS AA +P +S+ + +A EPT
Sbjct: 1152 TPEESASAAVAV----PTPEESAS--PAAAVPTPAESASFAAV---------VATLEEPT 1196
Query: 532 YQG----SPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGT 587
+P A A+ E ++ + + A + P P PAAAVP
Sbjct: 1197 SPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEP--TSPAAAVPTLEEP 1254
Query: 588 EGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEE-QKQTAAVALCQLAAYSP 646
S PE L A P E A A AV + EE AAV ++AA
Sbjct: 1255 TSSAAAVLTPE----ELSSPAASVPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPA 1310
Query: 647 RNIRVGDGDA--AAPEPACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKS 698
++ + A AA P + +P A D P ++ T + + S
Sbjct: 1311 ASVPTPEVPAIPAAAVPPMEEVSPIGVPFLGVSAHTDSVPISEEGTPVLEEASS 1364
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.1 bits (105), Expect = 2e-04
Identities = 128/562 (22%), Positives = 178/562 (31%), Gaps = 133/562 (23%)
Query: 128 QKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNP 187
Q+PA S +P A P+ G R A + + KG P+
Sbjct: 226 QRPASRSLSSSATPLSSPARSG-PSARGTPRAPAHP--SQPKPKGLQALRPPQVTPPRKD 282
Query: 188 TAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKIS--------STKGLGA--------- 230
A A+ + S TP P SP PP S +T LG+
Sbjct: 283 AAPALGPLSSSPLATPS-PSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSF 341
Query: 231 -----ISPYMHPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFL 285
+SP P P+ PP + P L A SP PL S T P+
Sbjct: 342 LPSPPLSPLATPP-PQAPP---------ALALPPLQAPPSPPASPPL-SPLATPSPQA-- 388
Query: 286 PHPGPIPKHLAPSPATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYGLRLPPVT--GLTR 343
P + HL +P + P + P+ F P S PPV+
Sbjct: 389 --PNALAVHLLQAPFSP---------PPSPPVQAPFSPPAS---------PPVSPSATPP 428
Query: 344 DQSSHLLEEATLVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPR 403
Q+ L L P S P+ P P+ +P P+A A +K P+
Sbjct: 429 SQAPPSLAAPPLQVPPSPPAS-PPMSPSA------TPPPQAPPPLAAPPLQL--AKPPPQ 479
Query: 404 AGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFR------- 456
A A P + P+ + G S A+ PP Q+
Sbjct: 480 APPALATPPLQALPSP----PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 535
Query: 457 ------PVKKSTECLPAQAAETTAESP-VSLNVVNGDPPAPTGSASLV---------SEA 500
P ++ P +T+ P ++L + G PP P+ S S S +
Sbjct: 536 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS 595
Query: 501 APSSPD-----DSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSV 555
A S+P+ DS G S + LAA H + P
Sbjct: 596 ATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP------------------- 636
Query: 556 KDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEG-----SEDGPSHPETKPGSLDGDGAP 610
AP AF G P A P +G +GP PG+LD +P
Sbjct: 637 -------APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSP 689
Query: 611 PTGPGEEAPDACAVDSSEEQKQ 632
T G+ A A A SS KQ
Sbjct: 690 GTSGGKAAAGAGAGASSRSPKQ 711
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 45.1 bits (105), Expect = 2e-04
Identities = 86/351 (24%), Positives = 113/351 (32%), Gaps = 63/351 (17%)
Query: 362 PSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFM 421
P+R P P SP P A++ G +P G+ GS G SP +
Sbjct: 621 PARAPPGQPAEPDAPRSSPGPGAREEGAGGAA-------TPEDGAGGRGSEGSQSPGSSV 673
Query: 422 QTSQT------CEGLYDLSNKAASSALGRLY--------PPEQSLTAFRPVKKSTECLPA 467
++ CE ++ + + + Y PP + P + P+
Sbjct: 674 DDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASRHDPPPRRPAAPPGPPGPAAPPAPS 733
Query: 468 QAAETTAESP---VSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMG------------ 512
AA L+ PP P G A AP SP SG G
Sbjct: 734 PAAPVRTRRRRKLYELHAAGAPPPPPPGHAP-----APESPRPGSGSGSGPGLAPARSPG 788
Query: 513 -----PLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPA 567
P++LSKK L P + TA L L+ K AP P
Sbjct: 789 PAADGPIDLSKKPRRPLPGAPAPALADYHEC-TACRVSFHSLEAYLAHKKYSCPAAPPPG 847
Query: 568 FPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSS 627
G P AA P P G D H G L GAP GPG EA +
Sbjct: 848 ALGLPAAACPYC--PPNGPVRG--DLLEHFRLAHGLL--LGAPLAGPGVEA------RTP 895
Query: 628 EEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQDTPTLSSMESQEA 678
++ + A A A SP+ G D PEP P S + EA
Sbjct: 896 ADRGPSPAPA----PAASPQPGSRGPRDGLGPEPQEPPPGPPPSPAAAPEA 942
Score = 30.8 bits (68), Expect = 4.6
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 518 KKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEP 577
K+S ++ A E G+ E + + P + V P P P PG P+
Sbjct: 13 KRSLGDMEAREEVQLVGASHMEQKATAPEAPSPPSADVNSP--PPLPPPTSPGGPKE--- 67
Query: 578 AAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVA 637
EG E P E +PGS P +GP E P V +++ A ++
Sbjct: 68 ---------LEGQEPEPRPTEEEPGS------PWSGPDELEP----VVQDGQRRIRARLS 108
Query: 638 LCQLAAYSPRNIRVGDGDAAAPEPACRQDTPTLSSMESQEAQCDLRPKGQKRT 690
L ++ P + G A P + +P L+ + EA C LR Q T
Sbjct: 109 LATGLSWGPFH---GSVQTRASSPRQAEPSPALTLLLVDEA-CWLRTLPQALT 157
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 44.3 bits (103), Expect = 4e-04
Identities = 80/377 (21%), Positives = 128/377 (33%), Gaps = 44/377 (11%)
Query: 273 LSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQYPSNLPIPYGFYRPESAFSSYG 332
+ V+ + P+ L P P P P+ QQ P+ + RP
Sbjct: 251 VKVHDKETPQDSLVAPAQPPSQTFPPPSLPSKSVAMQQKPT------AYVRPMDGQDQAP 304
Query: 333 LRLPPVTGLTRDQSSHLLEEATLVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQ 392
P + L D E+ L PA + + + + ++ K
Sbjct: 305 SESPELKPLPEDYRQQTFEKTDLKVPAKAKLTKLKMPSQSVEQTYSNEVHCVEEILK--- 361
Query: 393 RDTEGSKMSPRAG--SAATGSPGR-PSPT-DFMQTSQTCEGL--YDLSNKAASSALGRLY 446
+ S P + +T P + P PT D S + YD S+K S++
Sbjct: 362 -EMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHVSSVTQNQKQYDTSSKTHSNS----- 415
Query: 447 PPEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDP---PAPTGSASLVSEAAPS 503
+Q ++ +E T E P S + P P P SA S + S
Sbjct: 416 --QQGTSSMLEDDLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESES 473
Query: 504 SPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQA 563
+ D S + S S+ + +EP +P+ E + ++ Q D T+
Sbjct: 474 TSDSDSSSDSESESSSSD---SEENEPLETPAPEPEPPTTNKWQ--------LDNWLTKV 522
Query: 564 PRPAFPGR-PRAAEPAAAVPQKTGTEGSEDGPSHPETK----PGSLDGDGAPPTG--PGE 616
+PA P PR+ EP P+ G+ S H E+K S APP PG+
Sbjct: 523 SQPAAPPEGPRSTEPPRRHPESKGSSDSATSQEHSESKDPPPKSSSKAPRAPPEAPHPGK 582
Query: 617 EAPDACAVDSSEEQKQT 633
+ Q+QT
Sbjct: 583 RSCQKSPAQQEPPQRQT 599
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 5e-04
Identities = 81/349 (23%), Positives = 102/349 (29%), Gaps = 47/349 (13%)
Query: 374 HVEFESPIPEAKDSSKAGQRDTEGSKMSP------RAGSAATGSPGRPSPTDFMQTSQTC 427
HV SP A A G+ P R G PG PSP
Sbjct: 61 HVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRR-------- 112
Query: 428 EGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDP 487
L + +L PP P + C P AA A P P
Sbjct: 113 ----PLVPAGPAPPAAKLRPP--------PEGSAGSCAPVPAAAAVAAGP---EPAPAGP 157
Query: 488 PAPTGSASLVSEAAPS-----SPDDSSGMG-PLNLSKKSEIN-LAATHEPTYQGSPQAET 540
P G A+L + A P P G G P +N AA + +P
Sbjct: 158 AKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Query: 541 ASFSELQDLPLNLSVKDPCNTQAPR---PAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHP 597
+ LPL Q P A P P A P AA P P
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAA----PAPAAPAAAPPPP 273
Query: 598 ETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGD-- 655
P +L P GP AP +++ A AA P + G
Sbjct: 274 PPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGA 333
Query: 656 -AAAPEPACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDA-GKSQQGA 702
AAAP P + ++P + A L G T+ G + QGA
Sbjct: 334 AAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGA 382
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 43.9 bits (102), Expect = 5e-04
Identities = 96/397 (24%), Positives = 144/397 (36%), Gaps = 64/397 (16%)
Query: 345 QSSHLLEEATLVYPASSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRA 404
Q S ++A V A++ + + P+ P P+P + + + A
Sbjct: 420 QPSGAAKDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAA 479
Query: 405 GSAATGSPGRPSPTDFMQTS--------QTCEGLY-------DLSNKAASSALGRLYPPE 449
+AA GS G P P D + + + C D +++A L L PP
Sbjct: 480 AAAAAGS-GAPEPLDGAEPAKESGLGAEERCPSALSRGPLDEDGTDEALPPPLAPLPPPP 538
Query: 450 QS-------LTAFRPVKKSTEC---LPAQAAETTAESPVSLNVVNGDPPAPTG---SASL 496
++AFRPV K TE L A E P P A +G S
Sbjct: 539 PPPARKGSYVSAFRPVVKDTESIAKLYGSAREAYGAGPAR----GPGPGAGSGGYVSPDF 594
Query: 497 VSEAAPS----SPD-DSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLP- 550
+SE + S SPD D++ +++ + E T +P A E P
Sbjct: 595 LSEGSSSYNSASPDVDTADEPEVDVESNRFPDDEDAQEETEPSAPSAGGGPDGEQPTGPP 654
Query: 551 --LNLSVKDPCNTQ---APRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLD 605
+ P N+ +PRP R R P A P G +ED PE P S
Sbjct: 655 SATSSGADGPANSPDGGSPRP----RRRLGPPPAGRP-AFGDLAAEDLVRRPERSPPSGG 709
Query: 606 G--DGAPPTGP-GEEAPDACAVDSSEEQKQTAAVALCQLAAY--SPRNIRVGDGDAAAPE 660
G + P GP G AP +E ++AAVAL A+Y +P A E
Sbjct: 710 GGYELREPCGPLGGPAPAKVFAPERDEHVKSAAVALGPAASYVCTPE----------AHE 759
Query: 661 PACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGK 697
P + +E++++ D R Q + D G+
Sbjct: 760 PDKEDNHSPADDLETRKSYPDQRSISQPSPANTDRGE 796
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 43.5 bits (101), Expect = 7e-04
Identities = 58/235 (24%), Positives = 87/235 (37%), Gaps = 36/235 (15%)
Query: 433 LSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPA-QAAETTAESPV------SLNVVNG 485
LSNK S+ + + ++ L +F KKST P P + +V NG
Sbjct: 313 LSNKCVSAIIQGIGKDKEPLISFLEPKKSTSVYPHFSTTNLIGPDPTFRGLWSAFHVENG 372
Query: 486 DPPAPTGSASLVSEAAPSSPDDSSGMGPLNLSK--KSEINLAATHEPTYQGSPQAETASF 543
D P G A L A+ SS S PL +++ K+E+NL + + S
Sbjct: 373 DS-LPAGFAFLKGSASTSS----SAEQPLGITQMPKAEVNLGGLSSLVVNTPITSVSLSH 427
Query: 544 SELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSH---PETK 600
S + ++ S N + P+ + P P + P + G E ED S+ E
Sbjct: 428 SSSESSKMSESKDQENNCERPKESNVLHPNGECPVKSEPTEPGDEDEEDAYSNELDDEEV 487
Query: 601 PGSLDGDGAPPTGP-------------------GEEAPDACAVDSSEEQKQTAAV 636
G L P G + A D +E++KQTAAV
Sbjct: 488 LGELTDSIGNKDFPLLNQSISPLSSSVLKFIEKGTSSSSATVSDDTEKKKQTAAV 542
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 42.7 bits (99), Expect = 0.001
Identities = 127/538 (23%), Positives = 189/538 (35%), Gaps = 112/538 (20%)
Query: 140 SPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNPTAKAVSFHTKSA 199
SP PE +L + P E P P R +GP + PE
Sbjct: 708 SPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPE------------------- 748
Query: 200 FHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYTEHGLATIYSPY 259
P + P L P+ A P++ P PE P A P+
Sbjct: 749 --EPHLSPRPEEPHLSPQ------------AEEPHLSPQ-PEEPCL------CAVPEEPH 787
Query: 260 LLAGSSPECDAPLLSVYGTQ---DPRHFLPHPGPIPKH--LAPSPATYDHYRFFQQYPSN 314
L SP+ + P LS + P+ PH P+P+ L+P P H + P
Sbjct: 788 L----SPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEE-SHLSPQSEEPCL 842
Query: 315 LPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSH-----LLEEATLVYPASSPSRLNP-- 367
P RPE + S L PP++ EE L P PS L+P
Sbjct: 843 SP------RPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPS-LSPLL 895
Query: 368 -----SDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKM------SPRAGSAATGSPGRPS 416
S+P + SP+PE S +G+ M P + +P S
Sbjct: 896 GEPALSEPGEPPL---SPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALS 952
Query: 417 PTDFMQTSQTCEGLYDLSNKAASSALGRLY--PPEQSLTAFRPVKKSTECLPAQAAETTA 474
P ++ +G D + A+ L PPE + T PV P+ +
Sbjct: 953 PLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMI-LPPSPGSPVGP 1011
Query: 475 ESPVSLNVVNGDPP--APTGSASLVSEAAPSS-----------PDDSSGMGP-LNLSKKS 520
SP+ + + PP +P SLV + +P S P S +G + +S ++
Sbjct: 1012 ASPILMEPL---PPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEA 1068
Query: 521 EINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAA 580
E++ T + + P E ++ S L +LS C +P PA E A
Sbjct: 1069 ELHEMETEKVSEPECPALEPSATSPLPSPMGDLS----CPAPSPAPALDDFSGLGEDTAP 1124
Query: 581 VPQKTGTEGSEDGPSHPE--TKPGSLDGD--GAPPTGPGEEAPDACAVDSSEEQKQTA 634
+ +G + S PE PGSL + G+P EE ++ E KQTA
Sbjct: 1125 L------DGIDAPGSQPEPGQTPGSLASELKGSPVLLDPEELAPVTPMEVYPECKQTA 1176
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 42.7 bits (99), Expect = 0.001
Identities = 110/448 (24%), Positives = 147/448 (32%), Gaps = 75/448 (16%)
Query: 103 QHSSAREDIKENLELQARGTHRCLGQKPALH-------RASPCKSPAPEAA------LGA 149
+HS + D AR P LH A PC SP + + LG
Sbjct: 1984 KHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDPGRGMGALPCGSPRLQLSPLTLCPLGR 2043
Query: 150 QPA--------LEGAARPSA--FVPVGEHRLKGPDNAEAPETLALHNPTAKAVSFHTKSA 199
+ A LEG P + P R P AE+P A A A +
Sbjct: 2044 ELAPRAHVLSKLEGTTDPGLPRYSPT---RRWSPGQAESPPRSAPPGKWALAGPGSPSAG 2100
Query: 200 FHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPY----MHPTIPEYPPHFYTEHGLATI 255
H PG F P PHK+ S SP+ P+ P H + + +
Sbjct: 2101 EHGPGLGLDPRVLFPPAPLPHKLLSRSPETCASPWKAESRSPSCSPGPAHPLSSRPFSAL 2160
Query: 256 --YSPYLLAGSSPE--CDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQY 311
+ ++LA + PL S + T+ P +P G P +
Sbjct: 2161 HDFHGHILARTEENIFSHLPLHSQHLTRAPCPLIPIGGIQMVQARPG-----------AH 2209
Query: 312 PSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPASSPSRLNPSDPN 371
P+ LP P + S FS G L TG Q E SS + ++P
Sbjct: 2210 PTLLPGPTAAW--VSGFSGGGSDL---TGAREAQ-----ERGRWSPTESSSASVSPVAKV 2259
Query: 372 RKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQTCEGLY 431
K S E D K +R G P TG+P P+PT T
Sbjct: 2260 SKFT--LSSELEGGDYPKERERTGGGPGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRP 2317
Query: 432 DLSNKAASSALGRLYP------PEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNG 485
+AA S RL PE S T S CL AE +A P ++G
Sbjct: 2318 PQGRRAAQSWSPRLESPRAPTNPEPSATPPLDRSSSVGCL----AEASARFPARTRNLSG 2373
Query: 486 DP------PAPTGSASLVSEAAPSSPDD 507
+P P P+GS A P P+D
Sbjct: 2374 EPRTRQDSPKPSGSGE--PRAHPHQPED 2399
Score = 42.4 bits (98), Expect = 0.002
Identities = 70/263 (26%), Positives = 100/263 (38%), Gaps = 47/263 (17%)
Query: 137 PCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNPTAKAVSFHT 196
P S + +A + + AA P G KGP P L P +A+
Sbjct: 1072 PQPSSSKPSAKSSLSQISSAATSHGGPPGG----KGPGQDRPP--LGPTVPYTEALQVFH 1125
Query: 197 KSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYTEHGLATIY 256
TP + P+LPP P + S + L P + P F T+ + +
Sbjct: 1126 HPVAQTPLHE----KPYLPP--PVSLFSFQHLVQHEP------GQSPEFFSTQAMSSLLS 1173
Query: 257 SPYLLAGSSPEC-DAPLLSVYGTQDPRHFLPHPGPIP-KHLAPSPATYDHYRFFQQYPSN 314
SPY + P AP L + T + HPG + L P PA F+Q PS
Sbjct: 1174 SPYSMPPLPPSLFQAPPLPLQPT------VLHPGQLHLPQLMPHPANIP----FRQPPSF 1223
Query: 315 LPIPY--------GFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYP-ASSPSRL 365
LP+PY GF+ P S + L+LP D SHL + T + P A+ + L
Sbjct: 1224 LPMPYPTSSALSSGFFLPLQ--SQFALQLP------GDVESHLPQIKTSLAPLATGSAGL 1275
Query: 366 NPSDPNRKHVEFESPIPEAKDSS 388
+PS + P A S+
Sbjct: 1276 SPSTEYSSDIRLPPVAPPASSSA 1298
Score = 34.3 bits (77), Expect = 0.42
Identities = 43/179 (24%), Positives = 60/179 (33%), Gaps = 38/179 (21%)
Query: 5 KERKPKKP-----HYIPRPPGKPF-------------KYKCFQCPFTCNEKSHLFNHMKY 46
KERKP+KP Y RP KP Y C C F+ KS+L+ H K
Sbjct: 182 KERKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
Query: 47 GLCKNSITLVS-----------EQDRVPKCPKSNSLDPKQTN---QPDATAKPASSKSVA 92
+ L S E +R+P + + T+ + AT+ + S
Sbjct: 242 HAHRIKAGLASGMGGEMYPHGLEMERIPGEEFEEPTEGESTDSEEETSATSGHPAELSPR 301
Query: 93 NGLSAFDSKLQHSSAREDIKENLELQARGTHRCLGQKPALHRASPCKSPAPEAALGAQP 151
S L S + E L T + L P P P+ E L +P
Sbjct: 302 PKQPLLSSGLYSSGSHSSSHERCSLSQSSTAQSLEDPP------PFVEPSSEHPLSHKP 354
Score = 30.0 bits (66), Expect = 7.9
Identities = 49/193 (25%), Positives = 72/193 (37%), Gaps = 30/193 (15%)
Query: 401 SPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSAL-GRLYPPEQSLTAF---R 456
S G+ GR SPT+ +S + + +S SS L G YP E+ T R
Sbjct: 2229 SDLTGAREAQERGRWSPTE--SSSASVSPVAKVSKFTLSSELEGGDYPKERERTGGGPGR 2286
Query: 457 PVKKSTECLPAQAAETTAESPVSLNVVNGDPP-----APTGSASLVSEAAPSSPDDSSGM 511
P + A A T SP + PP A + S L S AP++P+ S+
Sbjct: 2287 PPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRAAQSWSPRLESPRAPTNPEPSATP 2346
Query: 512 GPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGR 571
L + S + A + + NLS + +P+P+ G
Sbjct: 2347 P---LDRSSSVGCLAEASARFPARTR--------------NLSGEPRTRQDSPKPSGSGE 2389
Query: 572 PRA--AEPAAAVP 582
PRA +P VP
Sbjct: 2390 PRAHPHQPEDRVP 2402
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 42.7 bits (99), Expect = 0.001
Identities = 110/449 (24%), Positives = 147/449 (32%), Gaps = 76/449 (16%)
Query: 103 QHSSAREDIKENLELQARGTHRCLGQKPALH-------RASPCKSPAPEAA------LGA 149
+HS + D AR P LH A PC SP + + LG
Sbjct: 1984 KHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDPGRGMGALPCGSPRLQLSPLTLCPLGR 2043
Query: 150 QPA--------LEGAARPSA--FVPVGEHRLKGPDNAEAPETLALHNPTAKAVSFHTKSA 199
+ A LEG P + P R P AE+P A A A +
Sbjct: 2044 ELAPRAHVLSKLEGTTDPGLPRYSPT---RRWSPGQAESPPRSAPPGKWALAGPGSPSAG 2100
Query: 200 FHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYM-----HPTIPEYPPHFYTEHGLAT 254
H PG F P PHK+ S SP+ P+ P H + +
Sbjct: 2101 EHGPGLGLDPRVLFPPAPLPHKLLSRSPETCASPWQKAESRSPSCSPGPAHPLSSRPFSA 2160
Query: 255 I--YSPYLLAGSSPE--CDAPLLSVYGTQDPRHFLPHPGPIPKHLAPSPATYDHYRFFQQ 310
+ + ++LA + PL S + T+ P +P G P
Sbjct: 2161 LHDFHGHILARTEENIFSHLPLHSQHLTRAPCPLIPIGGIQMVQARPG-----------A 2209
Query: 311 YPSNLPIPYGFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYPASSPSRLNPSDP 370
+P+ LP P + S FS G L TG Q E SS + ++P
Sbjct: 2210 HPTLLPGPTAAW--VSGFSGGGSDL---TGAREAQ-----ERGRWSPTESSSASVSPVAK 2259
Query: 371 NRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTDFMQTSQTCEGL 430
K S E D K +R G P TG+P P+PT T
Sbjct: 2260 VSKFT--LSSELEGGDYPKERERTGGGPGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPR 2317
Query: 431 YDLSNKAASSALGRLYP------PEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVN 484
+AA S RL PE S T S CL AE +A P ++
Sbjct: 2318 PPQGRRAAQSWSPRLESPRAPTNPEPSATPPLDRSSSVGCL----AEASARFPARTRNLS 2373
Query: 485 GDP------PAPTGSASLVSEAAPSSPDD 507
G+P P P+GS A P P+D
Sbjct: 2374 GEPRTRQDSPKPSGSGE--PRAHPHQPED 2400
Score = 42.4 bits (98), Expect = 0.002
Identities = 70/263 (26%), Positives = 100/263 (38%), Gaps = 47/263 (17%)
Query: 137 PCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNAEAPETLALHNPTAKAVSFHT 196
P S + +A + + AA P G KGP P L P +A+
Sbjct: 1072 PQPSSSKPSAKSSLSQISSAATSHGGPPGG----KGPGQDRPP--LGPTVPYTEALQVFH 1125
Query: 197 KSAFHTPGYPWKAGSPFLPPEFPHKISSTKGLGAISPYMHPTIPEYPPHFYTEHGLATIY 256
TP + P+LPP P + S + L P + P F T+ + +
Sbjct: 1126 HPVAQTPLHE----KPYLPP--PVSLFSFQHLVQHEP------GQSPEFFSTQAMSSLLS 1173
Query: 257 SPYLLAGSSPEC-DAPLLSVYGTQDPRHFLPHPGPIP-KHLAPSPATYDHYRFFQQYPSN 314
SPY + P AP L + T + HPG + L P PA F+Q PS
Sbjct: 1174 SPYSMPPLPPSLFQAPPLPLQPT------VLHPGQLHLPQLMPHPANIP----FRQPPSF 1223
Query: 315 LPIPY--------GFYRPESAFSSYGLRLPPVTGLTRDQSSHLLEEATLVYP-ASSPSRL 365
LP+PY GF+ P S + L+LP D SHL + T + P A+ + L
Sbjct: 1224 LPMPYPTSSALSSGFFLPLQ--SQFALQLP------GDVESHLPQIKTSLAPLATGSAGL 1275
Query: 366 NPSDPNRKHVEFESPIPEAKDSS 388
+PS + P A S+
Sbjct: 1276 SPSTEYSSDIRLPPVAPPASSSA 1298
Score = 34.3 bits (77), Expect = 0.42
Identities = 43/179 (24%), Positives = 60/179 (33%), Gaps = 38/179 (21%)
Query: 5 KERKPKKP-----HYIPRPPGKPF-------------KYKCFQCPFTCNEKSHLFNHMKY 46
KERKP+KP Y RP KP Y C C F+ KS+L+ H K
Sbjct: 182 KERKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
Query: 47 GLCKNSITLVS-----------EQDRVPKCPKSNSLDPKQTN---QPDATAKPASSKSVA 92
+ L S E +R+P + + T+ + AT+ + S
Sbjct: 242 HAHRIKAGLASGMGGEMYPHGLEMERIPGEEFEEPTEGESTDSEEETSATSGHPAELSPR 301
Query: 93 NGLSAFDSKLQHSSAREDIKENLELQARGTHRCLGQKPALHRASPCKSPAPEAALGAQP 151
S L S + E L T + L P P P+ E L +P
Sbjct: 302 PKQPLLSSGLYSSGSHSSSHERCSLSQSSTAQSLEDPP------PFVEPSSEHPLSHKP 354
Score = 30.0 bits (66), Expect = 7.9
Identities = 49/193 (25%), Positives = 72/193 (37%), Gaps = 30/193 (15%)
Query: 401 SPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSAL-GRLYPPEQSLTAF---R 456
S G+ GR SPT+ +S + + +S SS L G YP E+ T R
Sbjct: 2230 SDLTGAREAQERGRWSPTE--SSSASVSPVAKVSKFTLSSELEGGDYPKERERTGGGPGR 2287
Query: 457 PVKKSTECLPAQAAETTAESPVSLNVVNGDPP-----APTGSASLVSEAAPSSPDDSSGM 511
P + A A T SP + PP A + S L S AP++P+ S+
Sbjct: 2288 PPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRAAQSWSPRLESPRAPTNPEPSATP 2347
Query: 512 GPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGR 571
L + S + A + + NLS + +P+P+ G
Sbjct: 2348 P---LDRSSSVGCLAEASARFPARTR--------------NLSGEPRTRQDSPKPSGSGE 2390
Query: 572 PRA--AEPAAAVP 582
PRA +P VP
Sbjct: 2391 PRAHPHQPEDRVP 2403
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.7 bits (99), Expect = 0.001
Identities = 77/364 (21%), Positives = 122/364 (33%), Gaps = 70/364 (19%)
Query: 360 SSPSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGSPGRPSPTD 419
SS + + S+ K + SP P++K SK +R S +P S
Sbjct: 212 SSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRST-----------TPAPKSRRA 260
Query: 420 FMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVS 479
TS D S + SA + + SP
Sbjct: 261 HRSTSADSASSSDTSRSRSRSAAAKTH----------------------TTALAGRSPSP 298
Query: 480 LNVVNGDPPAPTGSASLVSEAAPSSPDDSSGM--GPLNLSKKSEINLAATHEPTYQGSPQ 537
+ G+ AP S PSSP+ ++ P K + +AT SP
Sbjct: 299 ASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRP-----SPS 353
Query: 538 AETASFSELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAEPAAAVPQKTGTEGSEDGPSHP 597
E +S P P P P AE PQ T P +P
Sbjct: 354 PERSS-------------------TGPEPPAP-TPLLAERHGGSPQPLATTPLSQEPVNP 393
Query: 598 ETKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAA 657
++ S D +PP P E+ P + + +SS Q V+ + A+ SP + +
Sbjct: 394 PSE-ASPTRDRSPPKSP-EKLPQSSSSESSPPSPQPTKVS--RHASSSPESPK------P 443
Query: 658 APEPACRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAKLQDTARVFTLR 717
AP P ++ + + +++ R K T R G+S+ A + + +R T R
Sbjct: 444 APAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKR 503
Query: 718 RRAR 721
+R
Sbjct: 504 GHSR 507
Score = 41.2 bits (95), Expect = 0.003
Identities = 82/423 (19%), Positives = 141/423 (33%), Gaps = 69/423 (16%)
Query: 357 YPASS-----PSRLNPSDPNRKHVEFESPIPEAKDSSKAGQRDTEGSKMSPRAGSAATGS 411
YP+SS P+ N P H I ++ ++ ++M+P A S
Sbjct: 2323 YPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTS 2382
Query: 412 P-----------------------GRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPP 448
P R P+ Q+ T E S++ + L PP
Sbjct: 2383 PRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPP 2442
Query: 449 EQSLTAFRPVKKS----TECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPSS 504
Q PV + + CL AQ +S V + ++S AP
Sbjct: 2443 AQDQPR-SPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGV 2501
Query: 505 PDDSSGMGPLNL----------------------SKKSEINLAATHEPTYQGSPQAETAS 542
P G P + S S + +++ + S ++S
Sbjct: 2502 PHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSS 2561
Query: 543 FSELQDLPLNLSV---KDPCNTQAPRPAF-PGRPRAAEPAAAVPQKTGTEGSEDGPSHPE 598
SE LP+ V + P T AP+ A GRP EP A ++ + S S
Sbjct: 2562 DSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRP--PEPTPAKRKRRSSSSSSSSSSSSS 2619
Query: 599 TKPGSLDGDGAPPTGPGEEAPDACAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAA 658
+ S + + + + + SS + AL + A SP+ G+ + +
Sbjct: 2620 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPA--SPKKPPPGERRSRS 2677
Query: 659 PEPA--CRQDTPTLSSMESQEAQCDLRPKGQKRTSLRDAGKSQQGAKKAKLQDTARVFTL 716
P +D+ +LS + RP Q + + S++G+++ + D+
Sbjct: 2678 PRKPIDSLRDSRSLSYSPVERR----RPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHK 2733
Query: 717 RRR 719
RRR
Sbjct: 2734 RRR 2736
Score = 33.5 bits (75), Expect = 0.71
Identities = 71/326 (21%), Positives = 116/326 (35%), Gaps = 33/326 (10%)
Query: 402 PRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKS 461
P A +AA +P T L D AA++A+ P ++ A V +
Sbjct: 2233 PAASAAAMNLASARTPA-----IPTAVNLADSRTPAAAAAMNLASP--RTAVAPSAVNLA 2285
Query: 462 TECLPAQAAETTA--ESPVSLNVVN--GDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLS 517
P A A +P +L ++ G PT + S P +P ++ +GP +
Sbjct: 2286 DPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAH 2345
Query: 518 KKSEINL------AATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRPAFPGR 571
+ +N+ AA + + A S + L + LS + + + P R
Sbjct: 2346 ATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLL-DR 2404
Query: 572 PRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTG---PGEEAPDACAVDSSE 628
R+ P +A Q T SE PS P ++ G P P P A + S
Sbjct: 2405 ARSRTPPSAPSQSRMT--SERAPS-PSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRC 2461
Query: 629 EQKQTAAVALCQ---LAAYSPRNIRVGD--GDAAAPEPACRQ----DTPTLSSMESQEAQ 679
QT VA Q A + GD G + P P + P + + A
Sbjct: 2462 LIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSAL 2521
Query: 680 CDLRPKGQKRTSLRDAGKSQQGAKKA 705
L+P ++R+S + S + +
Sbjct: 2522 AALQPAKERRSSSSSSSSSSSSSSSS 2547
Score = 31.2 bits (69), Expect = 3.5
Identities = 66/270 (24%), Positives = 97/270 (35%), Gaps = 30/270 (11%)
Query: 333 LRLPPVTGLTRDQSSHLLEEATLVYPASS--PSRLNPSDPNRKHVEFESPIPEAKDSSKA 390
+R +G + D+S AT + S P LN S + SP P + S
Sbjct: 2075 IRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSP- 2133
Query: 391 GQRDTEGSKMSP-----RAGSAATGSPGRPSPTDFMQTS---QTCEGLYDLSNKAASSAL 442
G + GS +P +AG + PG P D +TS + L+ A S L
Sbjct: 2134 GMLEPLGSSRTPMSVLQQAGGSMMDGPG-PRIPDHQRTSVPENHAQSRIALALTAIS--L 2190
Query: 443 GRLYPPEQSLTAFRPVKKSTECLPAQ------------AAETTAESPVSLNVVNGDPPAP 490
G PP A + S P A+ A S ++N+ + PA
Sbjct: 2191 GTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAI 2250
Query: 491 TGSASLVSEAAPSSPDDSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLP 550
+ +L P++ + P S +NLA PT A + + L L
Sbjct: 2251 PTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALS 2310
Query: 551 LNLSVKDPCNTQAPRPAFPGRPRAAEPAAA 580
L S P T A P+ P+A PA+A
Sbjct: 2311 LTGSGTPP--TAANYPSSSRTPQA--PASA 2336
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.002
Identities = 65/307 (21%), Positives = 107/307 (34%), Gaps = 16/307 (5%)
Query: 335 LPPVTGLTRDQSSHLLEEATLVYPASSPSRL-NPSDPNRKHVEFESPIPEAKDSSKAGQR 393
LP GL Q + + ++ P +P++P + + P K+SS
Sbjct: 45 LPHYPGLLAHQKPFIRKSYKCLHKRCRPKLPPSPNNPPKFPNPHQPPKHPDKNSSVVNPT 104
Query: 394 DTEGSKM-SPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPE-QS 451
+++ S SA+T P+ T Q + T +++ ++ + L + P Q
Sbjct: 105 LVATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQD 164
Query: 452 LTAFRPVKKSTECLPAQAA---ETTAESPVSLNVVNGDPPAPTGSASLVSEAAP--SSPD 506
TA P +T P ++ ETTA P P + + + P ++P
Sbjct: 165 TTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPA 224
Query: 507 DSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRP 566
S P + A T P +P TA + P + + DP + AP
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA----VPPTP-SATTLDPSSASAPPE 279
Query: 567 AFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDS 626
P P+A P + ++ + P T P S AP T AP S
Sbjct: 280 TTAAPPT---PSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTS 336
Query: 627 SEEQKQT 633
Q T
Sbjct: 337 VTTQTTT 343
Score = 34.3 bits (77), Expect = 0.42
Identities = 55/237 (23%), Positives = 85/237 (35%), Gaps = 37/237 (15%)
Query: 458 VKKSTECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLS 517
++KS +CL + SP N P P P PD +S + L
Sbjct: 59 IRKSYKCLHKRCRPKLPPSP------NNPPKFPN------PHQPPKHPDKNSSVVNPTLV 106
Query: 518 KKSEI--------NLAATHEPTYQGSPQ-AETASFSELQDLPLNLSVKDPCNTQAPR--P 566
++I + T P PQ A T S E + +++ P N+ AP+
Sbjct: 107 ATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTT 166
Query: 567 AFPGRPRAAEPA----AAVPQKTGTEGSEDGPSH-PETKPGSLDGDGAPPTGPGEEAPDA 621
A P P A PA +A P+ T + + P + + APPT P A
Sbjct: 167 AAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPP---ATTP 223
Query: 622 CAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQDTPTLSSMESQEA 678
SS + TAA +P + +A PE TP+ ++++ A
Sbjct: 224 APPSSSAPPETTAAPPTPSATTPAPLS------SSAPPETTAVPPTPSATTLDPSSA 274
Score = 30.8 bits (68), Expect = 4.6
Identities = 63/306 (20%), Positives = 95/306 (31%), Gaps = 44/306 (14%)
Query: 7 RKPKKPHYIPRPPG-----KPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQDR 61
+ PK +P PG KPF K ++C H K N+ +
Sbjct: 37 QSPKSHFELPHYPGLLAHQKPFIRKSYKC-------LHKRCRPKLPPSPNNPPKFPNPHQ 89
Query: 62 VPKCPKSNS--LDPK---QTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLE 116
PK P NS ++P T P T AS+K F L ++ +EN+
Sbjct: 90 PPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTF---LPQNATTISSRENVN 146
Query: 117 LQARGTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNA 176
+ PA + + P P A A P+ +A P + P ++
Sbjct: 147 TSSSVATLAPVNSPA-PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSS 205
Query: 177 EAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKG-LGAISPYM 235
AP PT A TP P + P P ++T L + +P
Sbjct: 206 SAPPETTAAPPTPPAT---------TPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPE 256
Query: 236 HPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHL 295
+P P + A+ A +P P P P P+
Sbjct: 257 TTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTP-------------APPSSPAPQET 303
Query: 296 APSPAT 301
+P T
Sbjct: 304 TAAPIT 309
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.002
Identities = 65/307 (21%), Positives = 107/307 (34%), Gaps = 16/307 (5%)
Query: 335 LPPVTGLTRDQSSHLLEEATLVYPASSPSRL-NPSDPNRKHVEFESPIPEAKDSSKAGQR 393
LP GL Q + + ++ P +P++P + + P K+SS
Sbjct: 45 LPHYPGLLAHQKPFIRKSYKCLHKRCRPKLPPSPNNPPKFPNPHQPPKHPDKNSSVVNPT 104
Query: 394 DTEGSKM-SPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPE-QS 451
+++ S SA+T P+ T Q + T +++ ++ + L + P Q
Sbjct: 105 LVATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQD 164
Query: 452 LTAFRPVKKSTECLPAQAA---ETTAESPVSLNVVNGDPPAPTGSASLVSEAAP--SSPD 506
TA P +T P ++ ETTA P P + + + P ++P
Sbjct: 165 TTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPA 224
Query: 507 DSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRP 566
S P + A T P +P TA + P + + DP + AP
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA----VPPTP-SATTLDPSSASAPPE 279
Query: 567 AFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDS 626
P P+A P + ++ + P T P S AP T AP S
Sbjct: 280 TTAAPPT---PSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTS 336
Query: 627 SEEQKQT 633
Q T
Sbjct: 337 VTTQTTT 343
Score = 34.3 bits (77), Expect = 0.42
Identities = 55/237 (23%), Positives = 85/237 (35%), Gaps = 37/237 (15%)
Query: 458 VKKSTECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLS 517
++KS +CL + SP N P P P PD +S + L
Sbjct: 59 IRKSYKCLHKRCRPKLPPSP------NNPPKFPN------PHQPPKHPDKNSSVVNPTLV 106
Query: 518 KKSEI--------NLAATHEPTYQGSPQ-AETASFSELQDLPLNLSVKDPCNTQAPR--P 566
++I + T P PQ A T S E + +++ P N+ AP+
Sbjct: 107 ATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTT 166
Query: 567 AFPGRPRAAEPA----AAVPQKTGTEGSEDGPSH-PETKPGSLDGDGAPPTGPGEEAPDA 621
A P P A PA +A P+ T + + P + + APPT P A
Sbjct: 167 AAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPP---ATTP 223
Query: 622 CAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQDTPTLSSMESQEA 678
SS + TAA +P + +A PE TP+ ++++ A
Sbjct: 224 APPSSSAPPETTAAPPTPSATTPAPLS------SSAPPETTAVPPTPSATTLDPSSA 274
Score = 30.8 bits (68), Expect = 4.6
Identities = 63/306 (20%), Positives = 95/306 (31%), Gaps = 44/306 (14%)
Query: 7 RKPKKPHYIPRPPG-----KPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQDR 61
+ PK +P PG KPF K ++C H K N+ +
Sbjct: 37 QSPKSHFELPHYPGLLAHQKPFIRKSYKC-------LHKRCRPKLPPSPNNPPKFPNPHQ 89
Query: 62 VPKCPKSNS--LDPK---QTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLE 116
PK P NS ++P T P T AS+K F L ++ +EN+
Sbjct: 90 PPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTF---LPQNATTISSRENVN 146
Query: 117 LQARGTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNA 176
+ PA + + P P A A P+ +A P + P ++
Sbjct: 147 TSSSVATLAPVNSPA-PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSS 205
Query: 177 EAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKG-LGAISPYM 235
AP PT A TP P + P P ++T L + +P
Sbjct: 206 SAPPETTAAPPTPPAT---------TPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPE 256
Query: 236 HPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHL 295
+P P + A+ A +P P P P P+
Sbjct: 257 TTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTP-------------APPSSPAPQET 303
Query: 296 APSPAT 301
+P T
Sbjct: 304 TAAPIT 309
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.002
Identities = 65/307 (21%), Positives = 107/307 (34%), Gaps = 16/307 (5%)
Query: 335 LPPVTGLTRDQSSHLLEEATLVYPASSPSRL-NPSDPNRKHVEFESPIPEAKDSSKAGQR 393
LP GL Q + + ++ P +P++P + + P K+SS
Sbjct: 45 LPHYPGLLAHQKPFIRKSYKCLHKRCRPKLPPSPNNPPKFPNPHQPPKHPDKNSSVVNPT 104
Query: 394 DTEGSKM-SPRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPE-QS 451
+++ S SA+T P+ T Q + T +++ ++ + L + P Q
Sbjct: 105 LVATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQD 164
Query: 452 LTAFRPVKKSTECLPAQAA---ETTAESPVSLNVVNGDPPAPTGSASLVSEAAP--SSPD 506
TA P +T P ++ ETTA P P + + + P ++P
Sbjct: 165 TTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPA 224
Query: 507 DSSGMGPLNLSKKSEINLAATHEPTYQGSPQAETASFSELQDLPLNLSVKDPCNTQAPRP 566
S P + A T P +P TA + P + + DP + AP
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA----VPPTP-SATTLDPSSASAPPE 279
Query: 567 AFPGRPRAAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDGDGAPPTGPGEEAPDACAVDS 626
P P+A P + ++ + P T P S AP T AP S
Sbjct: 280 TTAAPPT---PSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTS 336
Query: 627 SEEQKQT 633
Q T
Sbjct: 337 VTTQTTT 343
Score = 34.3 bits (77), Expect = 0.42
Identities = 55/237 (23%), Positives = 85/237 (35%), Gaps = 37/237 (15%)
Query: 458 VKKSTECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDSSGMGPLNLS 517
++KS +CL + SP N P P P PD +S + L
Sbjct: 59 IRKSYKCLHKRCRPKLPPSP------NNPPKFPN------PHQPPKHPDKNSSVVNPTLV 106
Query: 518 KKSEI--------NLAATHEPTYQGSPQ-AETASFSELQDLPLNLSVKDPCNTQAPR--P 566
++I + T P PQ A T S E + +++ P N+ AP+
Sbjct: 107 ATTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTT 166
Query: 567 AFPGRPRAAEPA----AAVPQKTGTEGSEDGPSH-PETKPGSLDGDGAPPTGPGEEAPDA 621
A P P A PA +A P+ T + + P + + APPT P A
Sbjct: 167 AAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPP---ATTP 223
Query: 622 CAVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQDTPTLSSMESQEA 678
SS + TAA +P + +A PE TP+ ++++ A
Sbjct: 224 APPSSSAPPETTAAPPTPSATTPAPLS------SSAPPETTAVPPTPSATTLDPSSA 274
Score = 30.8 bits (68), Expect = 4.6
Identities = 63/306 (20%), Positives = 95/306 (31%), Gaps = 44/306 (14%)
Query: 7 RKPKKPHYIPRPPG-----KPFKYKCFQCPFTCNEKSHLFNHMKYGLCKNSITLVSEQDR 61
+ PK +P PG KPF K ++C H K N+ +
Sbjct: 37 QSPKSHFELPHYPGLLAHQKPFIRKSYKC-------LHKRCRPKLPPSPNNPPKFPNPHQ 89
Query: 62 VPKCPKSNS--LDPK---QTNQPDATAKPASSKSVANGLSAFDSKLQHSSAREDIKENLE 116
PK P NS ++P T P T AS+K F L ++ +EN+
Sbjct: 90 PPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTF---LPQNATTISSRENVN 146
Query: 117 LQARGTHRCLGQKPALHRASPCKSPAPEAALGAQPALEGAARPSAFVPVGEHRLKGPDNA 176
+ PA + + P P A A P+ +A P + P ++
Sbjct: 147 TSSSVATLAPVNSPA-PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSS 205
Query: 177 EAPETLALHNPTAKAVSFHTKSAFHTPGYPWKAGSPFLPPEFPHKISSTKG-LGAISPYM 235
AP PT A TP P + P P ++T L + +P
Sbjct: 206 SAPPETTAAPPTPPAT---------TPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPE 256
Query: 236 HPTIPEYPPHFYTEHGLATIYSPYLLAGSSPECDAPLLSVYGTQDPRHFLPHPGPIPKHL 295
+P P + A+ A +P P P P P+
Sbjct: 257 TTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTP-------------APPSSPAPQET 303
Query: 296 APSPAT 301
+P T
Sbjct: 304 TAAPIT 309
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 42.0 bits (97), Expect = 0.002
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 51/292 (17%)
Query: 337 PVTGLTRDQSSHLLEEATLVYPASSPSRLNPSD--PNR-KHVEFESP--IPEAKDSSKAG 391
P+ G +D+ L+ E + A + R D P R H + SP +P + +S+
Sbjct: 393 PLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQP 452
Query: 392 QRDTEGSKMSPRAGSAATG-SPGRPSPTDFMQTSQTCEGLYDLSNKA--ASSALGRLYPP 448
+ P+ G G P R P +Q +G LS A S L + P
Sbjct: 453 AGPPAQQRPPPQGGPPQPGPGPQRQGPP--LQQRPPPQGQQHLSGLGPPAGSPLPQRLPS 510
Query: 449 EQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDPPAPTGSASLVSEAAPSSPDDS 508
S P + +++ P + PV+ G P AP + P+SP
Sbjct: 511 PTSA----PQQPASQAAPPTQGQGRQSRPVA-----GGPGAPPAARP------PASPSPQ 555
Query: 509 SGMGPLNLSKKSEINLAATHEPT--------YQGSPQ------AETASFSELQDLPLNLS 554
GP ++++ ++ A + + QG PQ T S+ +P
Sbjct: 556 RQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRT-- 613
Query: 555 VKDPCNTQAPRPAFP---GRPR---AAEPAAAVPQKTGTEGSEDGPSHPETK 600
P TQ PRP+ P GRP+ A +P+ VP + GP HP+ K
Sbjct: 614 --GPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPP--ATAAAGGPPHPQLK 661
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 42.0 bits (97), Expect = 0.002
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 18/176 (10%)
Query: 428 EGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKSTECLPAQAAETTAESPVSLNVVNGDP 487
EG +D+S+ + + PP + L FRPV+ +E TA + + + D
Sbjct: 408 EGGFDVSSDRSHLQGAQARPPPEQLKVFRPVED-------PESEQTAPKMLGMFYTSNDS 460
Query: 488 PAPTGSASLVSEAAPSSPDDSSGMG---PLNLSKKSEINLAATHEPTYQGSPQAETASFS 544
P+ + S + + PS + + P +S ++ + T +P E S S
Sbjct: 461 PSKSVFTSSLFQMEPSPRNQRKALNISEPFAVSVPLRVSAVISTNSTPCRTPPKELQSLS 520
Query: 545 ELQDLPLNLSVKDPCNTQAPRPAFPGRPRAAE-PAAAVPQKTGTEGSEDGPSHPET 599
L++ + S + +P AE AA+VP+K G E ++ P P T
Sbjct: 521 SLEEFSFHGSESGGWPEEE-------KPLGAETSAASVPKKAGLEDAKAVPEAPGT 569
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,650,199
Number of Sequences: 37866
Number of extensions: 2106696
Number of successful extensions: 11269
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 595
Number of HSP's that attempted gapping in prelim test: 9926
Number of HSP's gapped (non-prelim): 1805
length of query: 723
length of database: 18,247,518
effective HSP length: 110
effective length of query: 613
effective length of database: 14,082,258
effective search space: 8632424154
effective search space used: 8632424154
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.