Guide to the Human Genome
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Name: BAHCC1 Sequence: fasta or formatted (2608aa) NCBI GI: 169658367
Description:

BAH domain and coiled-coil containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8        281           5
 C cysteine            1.9         49           2
 D aspartate           4.3        112           2
 E glutamate           6.7        174           6
 F phenylalanine       2.2         57           1
 G glycine             9.7        252           4
 H histidine           2.8         74           2
 I isoleucine          1.4         37           2
 K lysine              5.9        153           4
 L leucine             9.5        248           3
 M methionine          1.2         30           2
 N asparagine          1.5         39           1
 P proline            10.4        271           4
 Q glutamine           4.6        120           3
 R arginine            6.8        178           3
 S serine             10.0        261           5
 T threonine           4.1        106           2
 V valine              4.2        109           3
 W tryptophan          0.5         14           1
 Y tyrosine            1.6         43           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BAH domain and coiled-coil containing 1 
TNRC18                0.108   trinucleotide repeat containing 18 
PELP1                 0.010   proline, glutamic acid and leucine rich protein 1 [...
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.009   PREDICTED: hypothetical protein LOC80164 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
KIAA0754              0.008   hypothetical protein LOC643314 
BAHD1                 0.008   bromo adjacent homology domain containing 1 
FLJ22184              0.008   PREDICTED: hypothetical protein FLJ22184 
SPEN                  0.008   spen homolog, transcriptional regulator 
SLC38A10              0.007   solute carrier family 38, member 10 isoform a 
RERE                  0.007   atrophin-1 like protein isoform b 
RERE                  0.007   atrophin-1 like protein isoform a 
RERE                  0.007   atrophin-1 like protein isoform a 
PCLO                  0.007   piccolo isoform 2 
PCLO                  0.007   piccolo isoform 1 
SAMD1                 0.007   sterile alpha motif domain containing 1 
SCAF1                 0.007   SR-related CTD-associated factor 1 
GLTSCR1               0.007   glioma tumor suppressor candidate region gene 1 [Ho...
TAF4                  0.007   TBP-associated factor 4 
NACA                  0.006   nascent polypeptide-associated complex alpha subuni...
MAP1A                 0.006   microtubule-associated protein 1A 
PHC3                  0.006   polyhomeotic like 3 
RAPH1                 0.006   Ras association and pleckstrin homology domains 1 is...
PRG4                  0.006   proteoglycan 4 isoform D 
PRG4                  0.006   proteoglycan 4 isoform C 
PRG4                  0.006   proteoglycan 4 isoform B 
PRG4                  0.006   proteoglycan 4 isoform A 
KDM6B                 0.006   lysine (K)-specific demethylase 6B 
SF1                   0.006   splicing factor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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