Guide to the Human Genome
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Name: ZNF330 Sequence: fasta or formatted (320aa) NCBI GI: 7657196
Description:

zinc finger protein 330

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         22           1
 C cysteine            9.1         29           1
 D aspartate           7.2         23           2
 E glutamate          10.0         32           4
 F phenylalanine       3.8         12           1
 G glycine             6.9         22           2
 H histidine           3.8         12           1
 I isoleucine          1.6          5           1
 K lysine              8.4         27           3
 L leucine             5.0         16           1
 M methionine          1.9          6           2
 N asparagine          3.1         10           1
 P proline             2.2          7           2
 Q glutamine           4.4         14           1
 R arginine            5.9         19           2
 S serine              7.8         25           2
 T threonine           5.0         16           1
 V valine              3.1         10           1
 W tryptophan          0.9          3           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 330 
VWDE                  0.030   von Willebrand factor D and EGF domains 
SLC24A1               0.021   solute carrier family 24 (sodium/potassium/calcium ex...
TRIM44                0.021   DIPB protein 
ZNF335                0.021   zinc finger protein 335 
TAF7L                 0.021   TATA box binding protein-associated factor, RNA poly...
BAZ2B                 0.021   bromodomain adjacent to zinc finger domain, 2B [Homo...
CASZ1                 0.019   castor homolog 1, zinc finger isoform a 
ZNF343                0.019   zinc finger protein 343 
ARID4B                0.019   AT rich interactive domain 4B isoform 1 
ITGB4                 0.019   integrin beta 4 isoform 2 precursor 
ITGB4                 0.019   integrin beta 4 isoform 1 precursor 
ITGB4                 0.019   integrin beta 4 isoform 3 precursor 
ZNF727                0.018   zinc finger protein 727 
LOC100294071          0.018   PREDICTED: similar to zinc finger protein 208 [Homo...
LAMA2                 0.018   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.018   laminin alpha 2 subunit isoform a precursor 
MYT1                  0.018   myelin transcription factor 1 
ZNF284                0.018   zinc finger protein 284 
ESF1                  0.018   ABT1-associated protein 
EHMT2                 0.018   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.018   euchromatic histone-lysine N-methyltransferase 2 is...
HMGB1                 0.018   high-mobility group box 1 
DAXX                  0.018   death-domain associated protein isoform a 
DAXX                  0.018   death-domain associated protein isoform a 
DAXX                  0.018   death-domain associated protein isoform b 
ZNF12                 0.018   zinc finger protein 12 isoform b 
ZNF12                 0.018   zinc finger protein 12 isoform a 
ANO8                  0.016   anoctamin 8 
ATAD2                 0.016   ATPase family, AAA domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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