Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF778 Sequence: fasta or formatted (729aa) NCBI GI: 153792259
Description:

zinc finger protein 778

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         39           2
 C cysteine            7.1         52           1
 D aspartate           3.2         23           2
 E glutamate           7.3         53           2
 F phenylalanine       4.0         29           2
 G glycine             7.8         57           2
 H histidine           6.4         47           2
 I isoleucine          2.6         19           1
 K lysine              8.5         62           1
 L leucine             5.6         41           2
 M methionine          0.8          6           1
 N asparagine          3.2         23           2
 P proline             3.7         27           1
 Q glutamine           3.6         26           2
 R arginine            5.3         39           2
 S serine              7.4         54           3
 T threonine           8.5         62           2
 V valine              5.1         37           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.7         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 778 
ZNF420                0.398   zinc finger protein 420 
ZNF560                0.390   zinc finger protein 560 
ZNF709                0.381   zinc finger protein 709 isoform a 
ZNF546                0.380   zinc finger protein 546 
ZNF184                0.380   zinc finger protein 184 
ZNF208                0.373   zinc finger protein 208 
ZNF433                0.371   zinc finger protein 433 
ZNF91                 0.368   zinc finger protein 91 
ZNF569                0.367   zinc finger protein 569 
ZNF700                0.366   zinc finger protein 700 
ZNF43                 0.365   zinc finger protein 43 
ZNF585B               0.363   zinc finger protein 585B 
ZNF595                0.361   zinc finger protein 595 
ZNF780B               0.360   zinc finger protein 780B 
ZNF160                0.360   zinc finger protein 160 
ZNF160                0.360   zinc finger protein 160 
ZNF665                0.360   zinc finger protein 665 
ZNF160                0.360   zinc finger protein 160 
ZNF14                 0.357   zinc finger protein 14 
LOC100287429          0.357   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.357   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.357   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.357   zinc finger protein 84 
ZNF84                 0.357   zinc finger protein 84 
ZNF30                 0.357   zinc finger protein 30 isoform a 
ZNF30                 0.357   zinc finger protein 30 isoform a 
ZNF624                0.356   zinc finger protein 624 
ZNF658                0.355   zinc finger protein 658 
ZNF268                0.355   zinc finger protein 268 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press