Search of human proteins with 10800412

Search of human proteins with 10800412

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|10800412 microtubule-associated protein, RP/EB family,
member 3 [Homo sapiens]
         (281 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|10800412 microtubule-associated protein, RP/EB family, member...   579   e-165
gi|6912494 microtubule-associated protein, RP/EB family, member ...   348   3e-96
gi|219842325 microtubule-associated protein, RP/EB family, membe...   344   6e-95
gi|219842327 microtubule-associated protein, RP/EB family, membe...   344   6e-95
gi|10346135 microtubule-associated protein, RP/EB family, member...   344   6e-95
gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens]      34   0.16 
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    31   1.1  
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    31   1.1  
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          31   1.4  
gi|29294627 PTPRF interacting protein binding protein 1 isoform ...    31   1.4  
gi|4503509 eukaryotic translation initiation factor 3, subunit 1...    30   2.4  
gi|47132519 Ras association and pleckstrin homology domains 1 is...    30   2.4  
gi|189011568 adenomatous polyposis coli [Homo sapiens]                 30   3.1  
gi|189011566 adenomatous polyposis coli [Homo sapiens]                 30   3.1  
gi|53759122 adenomatous polyposis coli [Homo sapiens]                  30   3.1  
gi|238908495 similar to pleckstrin homology domain protein (5V32...    29   4.0  
gi|4826878 oxidative-stress responsive 1 [Homo sapiens]                29   4.0  
gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]             29   4.0  
gi|109255234 centrosomal protein 290kDa [Homo sapiens]                 29   5.3  
gi|71774197 ubiquitin specific protease 47 [Homo sapiens]              29   5.3  
gi|55741655 anoctamin 8 [Homo sapiens]                                 28   6.9  
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]           28   6.9  
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]           28   6.9  
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa...    28   6.9  
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa...    28   6.9  
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap...    28   6.9  
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap...    28   6.9  
gi|18959210 WIRE protein [Homo sapiens]                                28   6.9  
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol...    28   9.0  
gi|110347568 centrosomal protein 152kDa [Homo sapiens]                 28   9.0  

>gi|10800412 microtubule-associated protein, RP/EB family, member 3
           [Homo sapiens]
          Length = 281

 Score =  579 bits (1492), Expect = e-165
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60
           MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK
Sbjct: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60

Query: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120
           VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD
Sbjct: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120

Query: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAP 180
           GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAP
Sbjct: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAP 180

Query: 181 PCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEH 240
           PCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEH
Sbjct: 181 PCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEH 240

Query: 241 ESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDEY 281
           ESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDEY
Sbjct: 241 ESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDEY 281


>gi|6912494 microtubule-associated protein, RP/EB family, member 1
           [Homo sapiens]
          Length = 268

 Score =  348 bits (893), Expect = 3e-96
 Identities = 184/283 (65%), Positives = 214/283 (75%), Gaps = 17/283 (6%)

Query: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60
           MAVNVYSTSVTS+NLSRHDMLAW+N+SL LN TKIEQLCSGAAYCQFMDMLFPG + L+K
Sbjct: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60

Query: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120
           VKFQAKLEHEYI NFK+LQA FK+MGVDKIIPV+KLVKGKFQDNFEF+QWFKKFFDANYD
Sbjct: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120

Query: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLI--GTAVPQRTSPTGPKNMQTSGRLSNV 178
           GKDY+P+ ARQGQ+ A  P+      NK KK +   +A PQR     P + Q +      
Sbjct: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQR-----PISTQRTAAAPK- 174

Query: 179 APPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQ 238
           A P ++RKNP     G    D +  EL QQ+  LKLTV+ LEKERDFYF KLR+IELICQ
Sbjct: 175 AGPGVVRKNP-----GVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQ 229

Query: 239 EHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDEY 281
           E+E EN PV+  I+ ILYAT+EGF  P+    E   QE+Q+EY
Sbjct: 230 ENEGENDPVLQRIVDILYATDEGFVIPD----EGGPQEEQEEY 268


>gi|219842325 microtubule-associated protein, RP/EB family, member 2
           isoform 2 [Homo sapiens]
          Length = 284

 Score =  344 bits (882), Expect = 6e-95
 Identities = 172/289 (59%), Positives = 217/289 (75%), Gaps = 13/289 (4%)

Query: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60
           MAVNVYSTS+T E +SRHD++AWVND + LNYTK+EQLCSGAAYCQFMDMLFPGC+ L+K
Sbjct: 1   MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKK 60

Query: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120
           VKFQAKLEHEYIHNFK+LQA+FK+M VDK+IPVEKLVKG+FQDN +FIQWFKKF+DANYD
Sbjct: 61  VKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYD 120

Query: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKL----IGTAVPQRTSPTGPKNMQTSGRLS 176
           GK+Y+P+ ARQGQD  PPP+PG+QIFN  KK       TA   ++SP   K   T  R S
Sbjct: 121 GKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAA-KPGSTPSRPS 179

Query: 177 NVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELI 236
           +         +  SA     + + Q+++LN+Q+  LKL ++G+EKERDFYF KLR+IEL+
Sbjct: 180 SAK----RASSSGSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELL 235

Query: 237 CQEHESENSPVISGIIGILYATEEGFAPPEDDEIEE--HQQE--DQDEY 281
           CQEH  EN  ++  ++ ILYA+EE     E+ E EE  H+Q+   Q+EY
Sbjct: 236 CQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY 284


>gi|219842327 microtubule-associated protein, RP/EB family, member 2
           isoform 3 [Homo sapiens]
          Length = 315

 Score =  344 bits (882), Expect = 6e-95
 Identities = 172/289 (59%), Positives = 217/289 (75%), Gaps = 13/289 (4%)

Query: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60
           MAVNVYSTS+T E +SRHD++AWVND + LNYTK+EQLCSGAAYCQFMDMLFPGC+ L+K
Sbjct: 32  MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKK 91

Query: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120
           VKFQAKLEHEYIHNFK+LQA+FK+M VDK+IPVEKLVKG+FQDN +FIQWFKKF+DANYD
Sbjct: 92  VKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYD 151

Query: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKL----IGTAVPQRTSPTGPKNMQTSGRLS 176
           GK+Y+P+ ARQGQD  PPP+PG+QIFN  KK       TA   ++SP   K   T  R S
Sbjct: 152 GKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAA-KPGSTPSRPS 210

Query: 177 NVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELI 236
           +         +  SA     + + Q+++LN+Q+  LKL ++G+EKERDFYF KLR+IEL+
Sbjct: 211 SAK----RASSSGSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELL 266

Query: 237 CQEHESENSPVISGIIGILYATEEGFAPPEDDEIEE--HQQE--DQDEY 281
           CQEH  EN  ++  ++ ILYA+EE     E+ E EE  H+Q+   Q+EY
Sbjct: 267 CQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY 315


>gi|10346135 microtubule-associated protein, RP/EB family, member 2
           isoform 1 [Homo sapiens]
          Length = 327

 Score =  344 bits (882), Expect = 6e-95
 Identities = 172/289 (59%), Positives = 217/289 (75%), Gaps = 13/289 (4%)

Query: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60
           MAVNVYSTS+T E +SRHD++AWVND + LNYTK+EQLCSGAAYCQFMDMLFPGC+ L+K
Sbjct: 44  MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKK 103

Query: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120
           VKFQAKLEHEYIHNFK+LQA+FK+M VDK+IPVEKLVKG+FQDN +FIQWFKKF+DANYD
Sbjct: 104 VKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYD 163

Query: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKL----IGTAVPQRTSPTGPKNMQTSGRLS 176
           GK+Y+P+ ARQGQD  PPP+PG+QIFN  KK       TA   ++SP   K   T  R S
Sbjct: 164 GKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAA-KPGSTPSRPS 222

Query: 177 NVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELI 236
           +         +  SA     + + Q+++LN+Q+  LKL ++G+EKERDFYF KLR+IEL+
Sbjct: 223 SAK----RASSSGSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELL 278

Query: 237 CQEHESENSPVISGIIGILYATEEGFAPPEDDEIEE--HQQE--DQDEY 281
           CQEH  EN  ++  ++ ILYA+EE     E+ E EE  H+Q+   Q+EY
Sbjct: 279 CQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY 327


>gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens]
          Length = 585

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 234 ELICQ-EHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDE 280
           EL CQ E E E     S   G+  ++ +  AP E DE EE ++E+++E
Sbjct: 335 ELDCQGEEEEEEEDGSSFCSGVTDSSTQSLAPSESDEEEEEEEEEEEE 382


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 29/201 (14%)

Query: 109  QWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKN 168
            QW +   D N +  +    L ++ +      +P  +   K+KK  G    ++ SP  PK 
Sbjct: 1324 QWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKL 1383

Query: 169  MQTSGRL----SNVAPPCILRKNPPSAR--NGGHETDAQILELNQQL------------- 209
             +    +     N    C + K P +++    G+ +  Q+ E+  QL             
Sbjct: 1384 TKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELI 1443

Query: 210  ---VDLKLTVDGLEKERDFYFSKL-RDIELIC---QEHESENSPVISGII---GILYATE 259
               VD K   + +   +      L +D+ L+C   Q    E S +    I    +  +  
Sbjct: 1444 RKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSAR 1503

Query: 260  EGFAPPEDDEIEEHQQEDQDE 280
            +  A  E+ E E +++E++++
Sbjct: 1504 QKIAKEEESEDESNEEEEEED 1524


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 33/194 (17%)

Query: 109  QWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPK- 167
            QW +   D N +  +    L ++ +      +P  +   K+KK  G    ++ SP  PK 
Sbjct: 1324 QWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKL 1383

Query: 168  -------------NMQTSGR-LSNVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLK 213
                            +SGR LS V      RK  P           +  EL ++ VD K
Sbjct: 1384 TKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELP-----------EYYELIRKPVDFK 1432

Query: 214  LTVDGLEKERDFYFSKL-RDIELIC---QEHESENSPVISGII---GILYATEEGFAPPE 266
               + +   +      L +D+ L+C   Q    E S +    I    +  +  +  A  E
Sbjct: 1433 KIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEE 1492

Query: 267  DDEIEEHQQEDQDE 280
            + E E +++E++++
Sbjct: 1493 ESEDESNEEEEEED 1506


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 251  IIGILYATEEGFAPPEDDEIEEHQQEDQDEY 281
            ++ + +A EE   PPEDDE  E+ +   +EY
Sbjct: 2833 VLRVSHAEEEERVPPEDDEYSEYSEYSVEEY 2863


>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
           [Homo sapiens]
          Length = 1005

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 199 DAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQE 239
           + Q L+L  ++ +LKL +  +EK+R  Y  K RD E + QE
Sbjct: 166 ETQKLDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQE 206


>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
           theta, 150/170kDa [Homo sapiens]
          Length = 1382

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 204 ELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFA 263
           EL Q+  +L+  V   E+ER    +K R+ E I QEHE      +   +  +  TE G  
Sbjct: 593 ELEQREAELQ-KVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAK 651

Query: 264 PPEDDEIEEHQQEDQD 279
             +D +IE+ ++ D D
Sbjct: 652 AFKDIDIEDLEELDPD 667


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 137 PPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPP 181
           PPP PG  +          ++PQ ++P  P  +     ++ VAPP
Sbjct: 717 PPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPP 761


>gi|189011568 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/41 (31%), Positives = 26/41 (63%)

Query: 193 NGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDI 233
           NG  E+   + EL ++   L   +D  EKE+D+Y+++L+++
Sbjct: 125 NGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNL 165


>gi|189011566 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/41 (31%), Positives = 26/41 (63%)

Query: 193 NGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDI 233
           NG  E+   + EL ++   L   +D  EKE+D+Y+++L+++
Sbjct: 125 NGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNL 165


>gi|53759122 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/41 (31%), Positives = 26/41 (63%)

Query: 193 NGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDI 233
           NG  E+   + EL ++   L   +D  EKE+D+Y+++L+++
Sbjct: 125 NGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNL 165


>gi|238908495 similar to pleckstrin homology domain protein (5V327)
           [Homo sapiens]
          Length = 506

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 13/67 (19%)

Query: 188 PPSARNGGHETDAQILELNQQLVDLKLTVD-----------GLEKERDFYFSKLRDIELI 236
           PPS   G H    QI E  QQL++ KL  +            LE+ER+FY S+ + ++  
Sbjct: 279 PPSG--GLHSNLRQIEEKMQQLLEEKLLAEKRMKENEERSRALEEEREFYSSQSQALQNS 336

Query: 237 CQEHESE 243
            QE  +E
Sbjct: 337 LQELTAE 343


>gi|4826878 oxidative-stress responsive 1 [Homo sapiens]
          Length = 527

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 184 LRKNPPSARNGGHETDA--QILELNQQLVDLKLTVD------GLEKERDFYFSKLRDIEL 235
           L+ +PPS   G  + +   +  +  ++++ L L  D        E  R  +F K ++ E 
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299

Query: 236 ICQEHESENSPVIS----------GIIGILYATEEGFAPPEDDEIEEHQQE 276
           + QE   + +P IS          G  G L+ TE+G     DDE +E  +E
Sbjct: 300 L-QEKTLQRAPTISERAKKVRRVPGSSGRLHKTEDGGWEWSDDEFDEESEE 349


>gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]
          Length = 4116

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%)

Query: 200  AQILELNQQLVDLKLTVDGLEKERDFY---FSKLRDIE---LICQEHESENSPVISGIIG 253
            AQ+ +LNQ+  +LKL VD L+   D +    +K +D+E    IC +       +ISG+ G
Sbjct: 2917 AQMQKLNQKRAELKLVVDRLQALNDDFEEMNTKKKDLEENIEICSQKLVRAEKLISGLGG 2976


>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
          Length = 2479

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 216 VDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEG--FAPPEDDEIEEH 273
           +D L+KE D Y  +++++  + +    E+ P+   ++ +    EE       +DDEI E+
Sbjct: 271 IDQLKKENDHYQLQVQELTDLLKSKNEEDDPI---MVAVNAKVEEWKLILSSKDDEIIEY 327

Query: 274 QQ 275
           QQ
Sbjct: 328 QQ 329


>gi|71774197 ubiquitin specific protease 47 [Homo sapiens]
          Length = 1287

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 15/78 (19%)

Query: 55  CVH-LRKVKFQAKLEHEYIHNFKVL----QAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQ 109
           C+H  ++V  + KLE   +H  K L    + A+K M ++++IP++     K+ +      
Sbjct: 525 CLHPTKQVMMENKLE---VHKDKTLKEAVEMAYKMMDLEEVIPLDCCRLVKYDE------ 575

Query: 110 WFKKFFDANYDGKDYNPL 127
            F  + + +Y+G++  P+
Sbjct: 576 -FHDYLERSYEGEEDTPM 592


>gi|55741655 anoctamin 8 [Homo sapiens]
          Length = 1232

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 6/28 (21%)

Query: 259 EEGFAPP------EDDEIEEHQQEDQDE 280
           EEG  PP      EDDE EE ++E++DE
Sbjct: 572 EEGDGPPGGKEEDEDDEEEEDEEEEEDE 599


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 239 EHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDE 280
           +H++ N+ V+          EE     E+DE EE  +ED+DE
Sbjct: 303 KHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDE 344


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 239 EHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDE 280
           +H++ N+ V+          EE     E+DE EE  +ED+DE
Sbjct: 303 KHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDE 344


>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
           sapiens]
          Length = 817

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 126 PLLARQGQDVAPPPN----PGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPP 181
           P+++  G D+  PPN    P  +   K  K + T  P +TS +  K   TS      AP 
Sbjct: 411 PVVSGTGNDITTPPNKELPPSPE---KKTKPLATTQPAKTSTSKAKTQPTS-LPKQPAPT 466

Query: 182 CI--LRKNPPSARNG 194
            I  L K P S  +G
Sbjct: 467 TIGGLNKKPMSLASG 481


>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
           sapiens]
          Length = 1135

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 126 PLLARQGQDVAPPPN----PGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPP 181
           P+++  G D+  PPN    P  +   K  K + T  P +TS +  K   TS      AP 
Sbjct: 676 PVVSGTGNDITTPPNKELPPSPE---KKTKPLATTQPAKTSTSKAKTQPTS-LPKQPAPT 731

Query: 182 CI--LRKNPPSARNG 194
            I  L K P S  +G
Sbjct: 732 TIGGLNKKPMSLASG 746


>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
           sapiens]
          Length = 887

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 126 PLLARQGQDVAPPPN----PGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPP 181
           P+++  G D+  PPN    P  +   K  K + T  P +TS +  K   TS      AP 
Sbjct: 411 PVVSGTGNDITTPPNKELPPSPE---KKTKPLATTQPAKTSTSKAKTQPTS-LPKQPAPT 466

Query: 182 CI--LRKNPPSARNG 194
            I  L K P S  +G
Sbjct: 467 TIGGLNKKPMSLASG 481


>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
           sapiens]
          Length = 1152

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 126 PLLARQGQDVAPPPN----PGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPP 181
           P+++  G D+  PPN    P  +   K  K + T  P +TS +  K   TS      AP 
Sbjct: 676 PVVSGTGNDITTPPNKELPPSPE---KKTKPLATTQPAKTSTSKAKTQPTS-LPKQPAPT 731

Query: 182 CI--LRKNPPSARNG 194
            I  L K P S  +G
Sbjct: 732 TIGGLNKKPMSLASG 746


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 138 PPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNG 194
           PP PG ++    +     A P    P  P N++T     ++APP    + PP   NG
Sbjct: 210 PPTPGQRLHPGREG--PPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNG 264


>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           A [Homo sapiens]
          Length = 353

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 196 HETDAQILELNQQLVDLKLTVDGLEKERDFYFSK 229
           H  +++  +L  Q+  LKL V  L KERD Y  K
Sbjct: 280 HILESEKCQLQSQVEQLKLEVGRLAKERDLYKEK 313


>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
          Length = 1654

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)

Query: 196 HETDAQILELNQQLVDLKLTVDGL-----EKERDFYFSKLRDIELICQ 238
           +E++ QI  LN QLV +K   DGL     E ++ F   K R+I+L  Q
Sbjct: 260 NESERQIRYLNHQLVIIKDEKDGLTLSLRESQKLFQNGKEREIQLEAQ 307


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,009,169
Number of Sequences: 37866
Number of extensions: 570824
Number of successful extensions: 2088
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2056
Number of HSP's gapped (non-prelim): 42
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.