Guide to the Human Genome
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Name: MAPRE1 Sequence: fasta or formatted (268aa) NCBI GI: 6912494
Description:

microtubule-associated protein, RP/EB family, member 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         23           3
 C cysteine            1.1          3           1
 D aspartate           6.7         18           2
 E glutamate           7.8         21           2
 F phenylalanine       5.2         14           2
 G glycine             6.3         17           2
 H histidine           0.7          2           1
 I isoleucine          4.9         13           2
 K lysine              8.2         22           2
 L leucine             8.2         22           1
 M methionine          2.2          6           1
 N asparagine          5.2         14           1
 P proline             5.6         15           1
 Q glutamine           6.7         18           2
 R arginine            3.4          9           1
 S serine              4.5         12           3
 T threonine           3.4          9           1
 V valine              7.5         20           2
 W tryptophan          0.7          2           1
 Y tyrosine            3.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein, RP/EB family, member ... 
MAPRE3                0.628   microtubule-associated protein, RP/EB family, member...
MAPRE2                0.554   microtubule-associated protein, RP/EB family, membe...
MAPRE2                0.554   microtubule-associated protein, RP/EB family, membe...
MAPRE2                0.554   microtubule-associated protein, RP/EB family, member...
APC2                  0.021   adenomatosis polyposis coli 2 
FTMT                  0.016   ferritin mitochondrial 
TOP2A                 0.014   DNA topoisomerase II, alpha isozyme 
SPAG1                 0.014   sperm associated antigen 1 
SPAG1                 0.014   sperm associated antigen 1 
CAP1                  0.014   adenylyl cyclase-associated protein 
CAP1                  0.014   adenylyl cyclase-associated protein 
ZIC2                  0.014   zinc finger protein of the cerebellum 2 
PPFIBP2               0.014   PTPRF interacting protein, binding protein 2 (lipri...
RPH3A                 0.012   rabphilin 3A homolog isoform 1 
RPH3A                 0.012   rabphilin 3A homolog isoform 2 
NKX1-1                0.010   PREDICTED: NK1 homeobox 1 
NKX1-1                0.010   PREDICTED: HPX-153 homeobox 
MARCKS                0.010   myristoylated alanine-rich protein kinase C substra...
CCDC18                0.010   sarcoma antigen NY-SAR-41 
CCDC99                0.010   coiled-coil domain containing 99 
CASKIN1               0.010   CASK interacting protein 1 
LDB3                  0.010   LIM domain binding 3 isoform 2 
LOC100293212          0.010   PREDICTED: hypothetical protein 
TFRC                  0.010   transferrin receptor 
TFRC                  0.010   transferrin receptor 
MYH7B                 0.010   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
GPC2                  0.010   glypican 2 
CXorf67               0.008   hypothetical protein LOC340602 
SMCR7                 0.008   Smith-Magenis syndrome chromosome region, candidate...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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