EIF3A 28597

Name: EIF3A	Sequence: fasta or formatted (1382aa)		NCBI GI: 4503509
Description: eukaryotic translation initiation factor 3, subunit 10 theta, 150/170kDa		Referenced in: Small RNAs in RNA Processing Translation Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 68 2 C cysteine 0.5 7 1 D aspartate 10.2 141 3 E glutamate 13.0 179 4 F phenylalanine 1.7 24 1 G glycine 4.0 55 2 H histidine 1.7 23 2 I isoleucine 3.3 45 2 K lysine 6.2 86 3 L leucine 8.5 118 3 M methionine 2.1 29 1 N asparagine 2.7 38 2 P proline 4.9 68 3 Q glutamine 4.9 68 2 R arginine 16.3 225 3 S serine 4.9 68 3 T threonine 2.8 39 2 V valine 3.6 50 2 W tryptophan 2.0 27 1 Y tyrosine 1.7 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 eukaryotic translation initiation factor 3, subunit 1... TCHH 0.057 trichohyalin LOC100286959 0.043 PREDICTED: hypothetical protein XP_002343921 ZC3H13 0.041 zinc finger CCCH-type containing 13 LOC283685 0.040 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.036 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283767 0.034 golgi autoantigen, golgin subfamily a-like LOC727832 0.032 golgi autoantigen, golgin subfamily a-like LOC440243 0.032 PREDICTED: Putative golgin subfamily A member 6-lik... LOC645202 0.031 PREDICTED: hypothetical protein LOC645202 INCENP 0.031 inner centromere protein antigens 135/155kDa isofor... INCENP 0.031 inner centromere protein antigens 135/155kDa isofor... LOC400352 0.027 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.027 PREDICTED: similar to Putative golgin subfamily A m... RPGR 0.027 retinitis pigmentosa GTPase regulator isoform C [Hom... RBM25 0.027 RNA binding motif protein 25 LOC100133758 0.027 PREDICTED: hypothetical protein, partial ANKRD11 0.026 ankyrin repeat domain 11 SAFB2 0.026 scaffold attachment factor B2 LOC100131202 0.025 PREDICTED: hypothetical protein CALD1 0.025 caldesmon 1 isoform 1 ITSN2 0.025 intersectin 2 isoform 3 TCHP 0.024 trichoplein TCHP 0.024 trichoplein YLPM1 0.024 YLP motif containing 1 LOC100131202 0.023 PREDICTED: hypothetical protein PLEC1 0.023 plectin 1 isoform 11 PLEC1 0.023 plectin 1 isoform 10 PLEC1 0.023 plectin 1 isoform 8 PLEC1 0.023 plectin 1 isoform 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.