USP47 35249

Name: USP47	Sequence: fasta or formatted (1287aa)		NCBI GI: 71774197
Description: ubiquitin specific protease 47		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 58 2 C cysteine 1.7 22 2 D aspartate 7.5 97 3 E glutamate 9.8 126 2 F phenylalanine 4.0 52 2 G glycine 5.0 64 2 H histidine 2.3 30 1 I isoleucine 4.0 51 1 K lysine 7.1 92 3 L leucine 9.8 126 3 M methionine 2.3 29 2 N asparagine 3.7 48 2 P proline 3.5 45 1 Q glutamine 4.5 58 4 R arginine 4.9 63 2 S serine 9.8 126 3 T threonine 5.0 64 2 V valine 5.7 74 2 W tryptophan 1.1 14 1 Y tyrosine 3.7 48 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 47 USP7 0.062 ubiquitin specific peptidase 7 USP40 0.053 ubiquitin thioesterase 40 USP48 0.050 ubiquitin specific protease 48 isoform b USP48 0.050 ubiquitin specific protease 48 isoform a USP24 0.047 ubiquitin specific protease 24 USP18 0.046 ubiquitin specific protease 18 USP41 0.045 PREDICTED: ubiquitin specific peptidase 41 USP41 0.044 PREDICTED: ubiquitin specific protease 41 USP9Y 0.044 ubiquitin specific protease 9, Y-linked USP34 0.042 ubiquitin specific protease 34 USP41 0.041 PREDICTED: ubiquitin specific peptidase 41 USP9X 0.041 ubiquitin specific protease 9, X-linked isoform 4 [... USP9X 0.041 ubiquitin specific protease 9, X-linked isoform 3 [... USP36 0.029 ubiquitin specific peptidase 36 USP12 0.028 ubiquitin thiolesterase 12 LOC100288520 0.026 PREDICTED: hypothetical protein XP_002342486 LOC100287404 0.025 PREDICTED: hypothetical protein XP_002342477 LOC100287178 0.025 PREDICTED: hypothetical protein XP_002342472 LOC100287364 0.025 PREDICTED: hypothetical protein XP_002342476 USP46 0.024 ubiquitin specific peptidase 46 isoform 2 USP46 0.024 ubiquitin specific peptidase 46 isoform 1 USP42 0.023 ubiquitin specific peptidase 42 DUB3 0.023 deubiquitinating enzyme 3 USP17L8 0.023 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... USP17L3 0.023 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17... LOC728379 0.022 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC728373 0.022 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC100287513 0.022 PREDICTED: hypothetical protein XP_002342480 LOC100287327 0.022 PREDICTED: hypothetical protein XP_002342475 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.