Guide to the Human Genome
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Name: CEP152 Sequence: fasta or formatted (1654aa) NCBI GI: 110347568
Description:

centrosomal protein 152kDa

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         87           3
 C cysteine            2.2         36           2
 D aspartate           4.9         81           3
 E glutamate          12.2        201           2
 F phenylalanine       1.8         29           1
 G glycine             4.1         67           2
 H histidine           2.5         42           2
 I isoleucine          4.4         73           2
 K lysine              9.6        158           3
 L leucine            10.6        176           3
 M methionine          2.1         35           1
 N asparagine          4.7         78           2
 P proline             3.6         59           2
 Q glutamine           8.7        144           3
 R arginine            3.7         62           2
 S serine              8.1        134           3
 T threonine           4.5         75           2
 V valine              4.2         69           2
 W tryptophan          0.8         14           1
 Y tyrosine            2.1         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 152kDa 
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH10                 0.031   myosin, heavy polypeptide 10, non-muscle 
GOLGB1                0.030   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH9                  0.029   myosin, heavy polypeptide 9, non-muscle 
GCC2                  0.029   GRIP and coiled-coil domain-containing 2 
NUMA1                 0.027   nuclear mitotic apparatus protein 1 
GOLGA4                0.027   golgi autoantigen, golgin subfamily a, 4 
CENPF                 0.026   centromere protein F 
EEA1                  0.026   early endosome antigen 1, 162kD 
TRIP11                0.025   thyroid hormone receptor interactor 11 
CENPE                 0.025   centromere protein E 
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CEP250                0.025   centrosomal protein 2 
MYH3                  0.025   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CCDC88A               0.024   coiled-coil domain containing 88A isoform 2 
FAM184A               0.024   hypothetical protein LOC79632 isoform 1 
MYH13                 0.024   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TPR                   0.024   nuclear pore complex-associated protein TPR 
MYH1                  0.024   myosin, heavy chain 1, skeletal muscle, adult [Homo...
RAD50                 0.023   RAD50 homolog isoform 2 
RAD50                 0.023   RAD50 homolog isoform 1 
ERC1                  0.023   RAB6-interacting protein 2 isoform delta 
ROCK2                 0.023   Rho-associated, coiled-coil containing protein kinas...
MYH14                 0.023   myosin, heavy chain 14 isoform 1 
MYH14                 0.023   myosin, heavy chain 14 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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