Guide to the Human Genome
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Name: MAPRE2 Sequence: fasta or formatted (284aa) NCBI GI: 219842325
Description:

microtubule-associated protein, RP/EB family, member 2 isoform 2

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [327aa] microtubule-associated protein, RP/EB family, member 2 isoform 1
alt prot [315aa] microtubule-associated protein, RP/EB family, member 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         22           2
 C cysteine            1.4          4           1
 D aspartate           6.0         17           2
 E glutamate           9.9         28           2
 F phenylalanine       4.2         12           1
 G glycine             4.6         13           1
 H histidine           3.5         10           2
 I isoleucine          4.6         13           2
 K lysine              8.1         23           2
 L leucine             7.4         21           2
 M methionine          2.1          6           1
 N asparagine          3.9         11           1
 P proline             5.6         16           3
 Q glutamine           7.4         21           2
 R arginine            3.2          9           1
 S serine              8.1         23           3
 T threonine           2.8          8           1
 V valine              5.3         15           1
 W tryptophan          0.7          2           1
 Y tyrosine            3.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein, RP/EB family, membe... 
MAPRE2                1.000   microtubule-associated protein, RP/EB family, membe...
MAPRE2                1.000   microtubule-associated protein, RP/EB family, member...
MAPRE3                0.577   microtubule-associated protein, RP/EB family, member...
MAPRE1                0.515   microtubule-associated protein, RP/EB family, member ...
RAI14                 0.031   retinoic acid induced 14 isoform d 
RAI14                 0.031   retinoic acid induced 14 isoform c 
RAI14                 0.031   retinoic acid induced 14 isoform b 
RAI14                 0.031   retinoic acid induced 14 isoform a 
RAI14                 0.031   retinoic acid induced 14 isoform a 
RAI14                 0.031   retinoic acid induced 14 isoform a 
LOC440563             0.024   heterogeneous nuclear ribonucleoprotein C-like [Hom...
HNRNPCL1              0.022   heterogeneous nuclear ribonucleoprotein C-like 1 [Ho...
SFRS2IP               0.022   splicing factor, arginine/serine-rich 2, interactin...
PPFIBP1               0.022   PTPRF interacting protein binding protein 1 isoform ...
CASKIN1               0.020   CASK interacting protein 1 
GOLGB1                0.020   golgi autoantigen, golgin subfamily b, macrogolgin ...
BAHCC1                0.020   BAH domain and coiled-coil containing 1 
SPATS2L               0.018   SPATS2-like protein isoform b 
BSN                   0.018   bassoon protein 
BRD4                  0.018   bromodomain-containing protein 4 isoform long 
CKAP5                 0.018   colonic and hepatic tumor over-expressed protein iso...
CKAP5                 0.018   colonic and hepatic tumor over-expressed protein iso...
PFTK1                 0.018   PFTAIRE protein kinase 1 
TBC1D2                0.018   TBC1 domain family, member 2 
PPFIBP2               0.018   PTPRF interacting protein, binding protein 2 (lipri...
CLASP1                0.018   CLIP-associating protein 1 isoform 3 
CLASP1                0.018   CLIP-associating protein 1 isoform 2 
LOC100133142          0.016   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.016   PREDICTED: similar to zinc finger protein 208 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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