Guide to the Human Genome
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Name: CSRNP3 Sequence: fasta or formatted (585aa) NCBI GI: 23346412
Description:

cysteine-serine-rich nuclear protein 3

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         29           2
 C cysteine            3.4         20           2
 D aspartate           6.2         36           5
 E glutamate          12.5         73          13
 F phenylalanine       3.2         19           2
 G glycine             5.5         32           2
 H histidine           3.9         23           1
 I isoleucine          3.6         21           1
 K lysine              4.1         24           2
 L leucine             7.0         41           2
 M methionine          1.4          8           1
 N asparagine          3.6         21           1
 P proline             4.8         28           1
 Q glutamine           3.1         18           2
 R arginine            5.0         29           2
 S serine             13.2         77           3
 T threonine           5.6         33           1
 V valine              6.3         37           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.7         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-serine-rich nuclear protein 3 
CSRNP2                0.382   TGF-beta induced apoptosis protein 12 
CSRNP1                0.225   AXIN1 up-regulated 1 
CHIC1                 0.024   cysteine-rich hydrophobic domain 1 
MYT1                  0.023   myelin transcription factor 1 
UBTF                  0.022   upstream binding transcription factor, RNA polymera...
UBTF                  0.022   upstream binding transcription factor, RNA polymera...
UBTF                  0.022   upstream binding transcription factor, RNA polymerase...
HMGB1                 0.021   high-mobility group box 1 
NCL                   0.021   nucleolin 
EHMT2                 0.020   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.020   euchromatic histone-lysine N-methyltransferase 2 is...
SLC24A1               0.020   solute carrier family 24 (sodium/potassium/calcium ex...
SETD1B                0.020   SET domain containing 1B 
CENPB                 0.020   centromere protein B 
ANP32E                0.020   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
YTHDC1                0.020   splicing factor YT521-B isoform 2 
YTHDC1                0.020   splicing factor YT521-B isoform 1 
HUWE1                 0.019   HECT, UBA and WWE domain containing 1 
ZFHX3                 0.019   AT-binding transcription factor 1 
ANP32E                0.019   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.019   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
FAM9A                 0.019   family with sequence similarity 9, member A 
HOMEZ                 0.019   homeodomain leucine zipper protein 
BPTF                  0.018   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.018   bromodomain PHD finger transcription factor isoform ...
PPM1G                 0.018   protein phosphatase 1G 
MYST4                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
PPM1G                 0.018   protein phosphatase 1G 
MYT1L                 0.018   myelin transcription factor 1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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