Guide to the Human Genome
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Name: MAPRE3 Sequence: fasta or formatted (281aa) NCBI GI: 10800412
Description:

microtubule-associated protein, RP/EB family, member 3

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         16           2
 C cysteine            1.8          5           1
 D aspartate           6.8         19           2
 E glutamate           7.8         22           2
 F phenylalanine       5.3         15           2
 G glycine             5.7         16           2
 H histidine           2.8          8           1
 I isoleucine          5.7         16           2
 K lysine              7.8         22           2
 L leucine             8.5         24           2
 M methionine          2.1          6           1
 N asparagine          5.7         16           1
 P proline             6.0         17           3
 Q glutamine           6.4         18           2
 R arginine            3.2          9           1
 S serine              5.3         15           1
 T threonine           3.6         10           1
 V valine              5.7         16           1
 W tryptophan          0.7          2           1
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein, RP/EB family, member... 
MAPRE1                0.583   microtubule-associated protein, RP/EB family, member ...
MAPRE2                0.576   microtubule-associated protein, RP/EB family, membe...
MAPRE2                0.576   microtubule-associated protein, RP/EB family, membe...
MAPRE2                0.576   microtubule-associated protein, RP/EB family, member...
CSRNP3                0.016   cysteine-serine-rich nuclear protein 3 
SMARCA2               0.011   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.011   SWI/SNF-related matrix-associated actin-dependent re...
COL7A1                0.011   alpha 1 type VII collagen precursor 
PPFIBP1               0.011   PTPRF interacting protein binding protein 1 isoform ...
EIF3A                 0.009   eukaryotic translation initiation factor 3, subunit 1...
RAPH1                 0.009   Ras association and pleckstrin homology domains 1 is...
APC                   0.009   adenomatous polyposis coli 
APC                   0.009   adenomatous polyposis coli 
APC                   0.009   adenomatous polyposis coli 
FLJ44817              0.007   similar to pleckstrin homology domain protein (5V32...
OXSR1                 0.007   oxidative-stress responsive 1 
DNAH3                 0.007   dynein, axonemal, heavy chain 3 
CEP290                0.007   centrosomal protein 290kDa 
USP47                 0.007   ubiquitin specific protease 47 
ANO8                  0.005   anoctamin 8 
LOC645490             0.005   PREDICTED: similar to hCG1991922 
LOC645490             0.005   PREDICTED: similar to hCG1991922 
MAP4                  0.005   microtubule-associated protein 4 isoform 5 
MAP4                  0.005   microtubule-associated protein 4 isoform 4 
MAP4                  0.005   microtubule-associated protein 4 isoform 2 
MAP4                  0.005   microtubule-associated protein 4 isoform 1 
WIPF2                 0.005   WIRE protein 
MAFA                  0.005   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
CEP152                0.005   centrosomal protein 152kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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