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Search of human proteins with 18104944
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18104944 cerebellin 4 precursor [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18104944 cerebellin 4 precursor [Homo sapiens] 397 e-111
gi|32698861 cerebellin 2 precursor [Homo sapiens] 281 2e-76
gi|4757922 cerebellin 1 precursor [Homo sapiens] 271 4e-73
gi|89886217 cerebellin 3 precursor [Homo sapiens] 194 4e-50
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 91 9e-19
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 91 9e-19
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 91 9e-19
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 84 1e-16
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 81 5e-16
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 73 1e-13
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 73 1e-13
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 72 3e-13
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 72 3e-13
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 54 1e-07
gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho... 50 1e-06
gi|87298828 complement component 1, q subcomponent, B chain prec... 50 2e-06
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 48 5e-06
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 48 5e-06
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 48 5e-06
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 47 1e-05
gi|56786155 complement component 1, q subcomponent, C chain prec... 46 2e-05
gi|166235903 complement component 1, q subcomponent, C chain pre... 46 2e-05
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 46 2e-05
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 46 2e-05
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 46 2e-05
gi|7705753 complement component 1, q subcomponent, A chain precu... 45 5e-05
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 40 0.001
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 38 0.005
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 38 0.005
gi|4757760 adiponectin precursor [Homo sapiens] 37 0.011
>gi|18104944 cerebellin 4 precursor [Homo sapiens]
Length = 201
Score = 397 bits (1020), Expect = e-111
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MGSGRRALSAVPAVLLVLTLPGLPVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPL 60
MGSGRRALSAVPAVLLVLTLPGLPVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPL
Sbjct: 1 MGSGRRALSAVPAVLLVLTLPGLPVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPL 60
Query: 61 GISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLESVFVAPRKGIY 120
GISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLESVFVAPRKGIY
Sbjct: 61 GISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLESVFVAPRKGIY 120
Query: 121 SFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLE 180
SFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLE
Sbjct: 121 SFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLE 180
Query: 181 KGNLVGGWQYSTFSGFLVFPL 201
KGNLVGGWQYSTFSGFLVFPL
Sbjct: 181 KGNLVGGWQYSTFSGFLVFPL 201
>gi|32698861 cerebellin 2 precursor [Homo sapiens]
Length = 224
Score = 281 bits (720), Expect = 2e-76
Identities = 144/193 (74%), Positives = 167/193 (86%), Gaps = 4/193 (2%)
Query: 11 VPAVLLVLTLPGL-PVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPLGISVRAANS 69
V LL+L LP PV AQNDTEPIVLEGKCLVVCDS+P+ D G+ +S LGISVR+ ++
Sbjct: 34 VALALLLLLLPACCPVRAQNDTEPIVLEGKCLVVCDSSPSAD--GAVTSSLGISVRSGSA 91
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTL-ESVFVAPRKGIYSFSFHVIK 128
KVAFSA RSTNHEPSEMSN+T IYFDQ+LVN+GN F L S+FVAPRKGIYSFSFHV+K
Sbjct: 92 KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGW 188
VY QTIQV+LM NG PVISAFAGD+DVTREAA+NGVLL +++EDKV+LKLE+GNL+GGW
Sbjct: 152 VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGW 211
Query: 189 QYSTFSGFLVFPL 201
+YSTFSGFLVFPL
Sbjct: 212 KYSTFSGFLVFPL 224
>gi|4757922 cerebellin 1 precursor [Homo sapiens]
Length = 193
Score = 271 bits (692), Expect = 4e-73
Identities = 133/179 (74%), Positives = 157/179 (87%), Gaps = 4/179 (2%)
Query: 24 PVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPLGISVRAANSKVAFSAVRSTNHEP 83
P QN+TEPIVLEGKCLVVCDSNP +D G++ LGISVR+ ++KVAFSA+RSTNHEP
Sbjct: 18 PARGQNETEPIVLEGKCLVVCDSNPTSDPTGTA---LGISVRSGSAKVAFSAIRSTNHEP 74
Query: 84 SEMSNKTRIIYFDQILVNVGNFFTLE-SVFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLN 142
SEMSN+T IIYFDQ+LVN+GN F E S F+APRKGIYSF+FHV+KVY QTIQV+LMLN
Sbjct: 75 SEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLN 134
Query: 143 GKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGWQYSTFSGFLVFPL 201
G PVISAFAGD+DVTREAA+NGVL+ ++K D+ YLKLE+GNL+GGW+YSTFSGFLVFPL
Sbjct: 135 GWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL 193
>gi|89886217 cerebellin 3 precursor [Homo sapiens]
Length = 205
Score = 194 bits (493), Expect = 4e-50
Identities = 111/194 (57%), Positives = 137/194 (70%), Gaps = 8/194 (4%)
Query: 12 PAVLLVLTLPGLPV-WAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPLGISVRAANSK 70
P + LVL L L WAQ +EP++LEG+CLVVC+ A + G + LG A +
Sbjct: 16 PGLPLVLVLLALGAGWAQEGSEPVLLEGECLVVCEPGRAA-AGGPGGAALG---EAPPGR 71
Query: 71 VAFSAVRSTNHEPS-EMSNKTR-IIYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFHVI 127
VAF+AVRS +HEP+ E N T IYFDQ+LVN G F S FVAP +G+YSF FHV+
Sbjct: 72 VAFAAVRSHHHEPAGETGNGTSGAIYFDQVLVNEGGGFDRASGSFVAPVRGVYSFRFHVV 131
Query: 128 KVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGG 187
KVY QT+QV+LMLN PVISAFA D DVTREAAT+ VLL LD D+V L+L +GNL+GG
Sbjct: 132 KVYNRQTVQVSLMLNTWPVISAFANDPDVTREAATSSVLLPLDPGDRVSLRLRRGNLLGG 191
Query: 188 WQYSTFSGFLVFPL 201
W+YS+FSGFL+FPL
Sbjct: 192 WKYSSFSGFLIFPL 205
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 90.5 bits (223), Expect = 9e-19
Identities = 51/132 (38%), Positives = 80/132 (60%), Gaps = 5/132 (3%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLE-SVFVAPRKGIYSFSFHVIK 128
+VAFSA R++N P + I FD +L N+G F L+ F P G Y F FH++K
Sbjct: 997 RVAFSAARTSNLAPGTLDQP---IVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLK 1053
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVG-G 187
+ + + VNLM N + ++SA+A D E A+N +L L + D+++L+L +G + G
Sbjct: 1054 LAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSS 1113
Query: 188 WQYSTFSGFLVF 199
W+YSTFSG+L++
Sbjct: 1114 WKYSTFSGYLLY 1125
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 90.5 bits (223), Expect = 9e-19
Identities = 51/132 (38%), Positives = 80/132 (60%), Gaps = 5/132 (3%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLE-SVFVAPRKGIYSFSFHVIK 128
+VAFSA R++N P + I FD +L N+G F L+ F P G Y F FH++K
Sbjct: 663 RVAFSAARTSNLAPGTLDQP---IVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLK 719
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVG-G 187
+ + + VNLM N + ++SA+A D E A+N +L L + D+++L+L +G + G
Sbjct: 720 LAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSS 779
Query: 188 WQYSTFSGFLVF 199
W+YSTFSG+L++
Sbjct: 780 WKYSTFSGYLLY 791
>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
Length = 1077
Score = 90.5 bits (223), Expect = 9e-19
Identities = 51/132 (38%), Positives = 80/132 (60%), Gaps = 5/132 (3%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLE-SVFVAPRKGIYSFSFHVIK 128
+VAFSA R++N P + I FD +L N+G F L+ F P G Y F FH++K
Sbjct: 947 RVAFSAARTSNLAPGTLDQP---IVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLK 1003
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVG-G 187
+ + + VNLM N + ++SA+A D E A+N +L L + D+++L+L +G + G
Sbjct: 1004 LAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSS 1063
Query: 188 WQYSTFSGFLVF 199
W+YSTFSG+L++
Sbjct: 1064 WKYSTFSGYLLY 1075
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 83.6 bits (205), Expect = 1e-16
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFHVI- 127
++AF A HE E ++ FD ++ NVGN + S F P G+Y F++HV+
Sbjct: 109 RIAFYAGLRRPHEGYE------VLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLM 162
Query: 128 KVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGG 187
+ ++ +LM NG+ SA A D D + A+N V+L+LD D+V++KL+ G + GG
Sbjct: 163 RGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGG 222
Query: 188 --WQYSTFSGFLVFP 200
+YSTFSGF+++P
Sbjct: 223 NTNKYSTFSGFIIYP 237
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 81.3 bits (199), Expect = 5e-16
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 12/154 (7%)
Query: 51 DSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LE 109
DS+G +S L S + K+AF + HE E ++ FD ++ N+GN +
Sbjct: 141 DSEGEVTSAL--SATFSGPKIAFYVGLKSPHEGYE------VLKFDDVVTNLGNHYDPTT 192
Query: 110 SVFVAPRKGIYSFSFHVI-KVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLY 168
F +GIY F++H++ + ++ +L NG+ SA A D D + A+N V+L+
Sbjct: 193 GKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLH 252
Query: 169 LDKEDKVYLKLEKGNLVGG--WQYSTFSGFLVFP 200
LD D+VY+KL+ G GG +YSTFSGFL++P
Sbjct: 253 LDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYP 286
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 73.2 bits (178), Expect = 1e-13
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFF-TLESVFVAPRKGIYSFSFHVIK 128
++AF A +T+ SN+ I F + N+GNFF + F AP G+Y F+F ++K
Sbjct: 117 QIAFMASLATH-----FSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMK 171
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGW 188
+ + V LM NG V S ++ + + ++N +L L K D+V+L++ G L G
Sbjct: 172 HEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDH 231
Query: 189 Q-YSTFSGFLVF 199
Q +STF+GFL+F
Sbjct: 232 QRFSTFAGFLLF 243
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 73.2 bits (178), Expect = 1e-13
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFF-TLESVFVAPRKGIYSFSFHVIK 128
++AF A +T+ SN+ I F + N+GNFF + F AP G+Y F+F ++K
Sbjct: 190 QIAFMASLATH-----FSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMK 244
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGW 188
+ + V LM NG V S ++ + + ++N +L L K D+V+L++ G L G
Sbjct: 245 HEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDH 304
Query: 189 Q-YSTFSGFLVF 199
Q +STF+GFL+F
Sbjct: 305 QRFSTFAGFLLF 316
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 72.0 bits (175), Expect = 3e-13
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LESVFVAPRKGIYSFSFHVI- 127
K+AF A HE E ++ FD ++ N+GN + F GIY F++HV+
Sbjct: 126 KIAFYAGLKRQHEGYE------VLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLM 179
Query: 128 KVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGG 187
+ ++ +L N + SA A D D + A+N V+L+L+ D+VY+KL+ G GG
Sbjct: 180 RGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGG 239
Query: 188 --WQYSTFSGFLVF 199
+YSTFSGF+++
Sbjct: 240 NNNKYSTFSGFIIY 253
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 72.0 bits (175), Expect = 3e-13
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFHVI- 127
+VAF A HE E ++ FD ++ N+GN + S F G Y F++HV+
Sbjct: 129 RVAFYAGLKNPHEGYE------VLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLM 182
Query: 128 KVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGG 187
+ ++ +L NG+ SA A D D + A+N V+L+LD D+V++KL+ G GG
Sbjct: 183 RGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGG 242
Query: 188 --WQYSTFSGFLVF 199
+YSTFSGF+++
Sbjct: 243 NSNKYSTFSGFIIY 256
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 53.5 bits (127), Expect = 1e-07
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 72 AFSAVRSTNHEPSEMSNKTRIIYFDQILVNV-GNFFTLESVFVAPRKGIYSFSFHVIKVY 130
AFSA RS + P + FD++LVN G++ + F G+Y F+ H VY
Sbjct: 105 AFSAKRSESRVPPPSDAP---LPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHAT-VY 160
Query: 131 QSQTIQVNLMLNGKPVISAFAGDKDVTREAA-TNGVLLYLDKEDKVYLKLEKGNLVGGWQ 189
++ ++Q +L+ NG+ + S F + A+ + G ++ L+ ED+V++++ G+ +G +
Sbjct: 161 RA-SLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYA 219
Query: 190 Y----STFSGFLVF 199
STFSGFLV+
Sbjct: 220 SIKTDSTFSGFLVY 233
>gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo
sapiens]
Length = 329
Score = 50.1 bits (118), Expect = 1e-06
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 41 LVVCDSNPATDSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPSEMSNKTRI--IYFDQI 98
LV D++ ++G + P + AFSA R+ + S+ R + FD
Sbjct: 155 LVYADADADAPARGPPAPP--------EPRSAFSAARTRSLVGSDAGPGPRHQPLAFDTE 206
Query: 99 LVNVG-NFFTLESVFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGD-KDV 156
VN+G +F VF G Y FSF + K+ + +T+ V LM N V + D
Sbjct: 207 FVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPR-KTLSVKLMKNRDEVQAMIYDDGASR 265
Query: 157 TREAATNGVLLYLDKEDKVYLKLEKGNLVGGW----QYSTFSGFLVFP 200
RE + V+L L + D V+L + G + +Y TFSGFLV+P
Sbjct: 266 RREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNHGKYITFSGFLVYP 313
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 49.7 bits (117), Expect = 2e-06
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 67 ANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFH 125
A K+AFSA R+ N + + I FD ++ N+ N + S F G+Y F++H
Sbjct: 118 ATQKIAFSATRTINVP----LRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYH 173
Query: 126 VIKVYQSQTIQVNLMLNGKPV--ISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGN 183
+ VNLM + + F T + T G++L L++ + V+L+ N
Sbjct: 174 ASS---RGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKN 230
Query: 184 LVGGWQ--YSTFSGFLVFP 200
+ G + S FSGFL+FP
Sbjct: 231 SLLGMEGANSIFSGFLLFP 249
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 48.1 bits (113), Expect = 5e-06
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LESVFVAPRKGIYSFSFHVIK 128
K AFS +T++ + I F+++L N G + F+ GIY FS+ +
Sbjct: 147 KSAFSVGITTSYPEERLP-----IIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDI-- 199
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKL---EKGNLV 185
++ + + L+ NG+ I F + + A+ ++YL ED+V+L++ ++ L
Sbjct: 200 TLANKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLF 258
Query: 186 G--GWQYSTFSGFLVF 199
GW S FSGFL++
Sbjct: 259 SDPGWADSLFSGFLLY 274
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 48.1 bits (113), Expect = 5e-06
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LESVFVAPRKGIYSFSFHVIK 128
K AFS +T++ + I F+++L N G + F+ GIY FS+ +
Sbjct: 147 KSAFSVGITTSYPEERLP-----IIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDI-- 199
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKL---EKGNLV 185
++ + + L+ NG+ I F + + A+ ++YL ED+V+L++ ++ L
Sbjct: 200 TLANKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLF 258
Query: 186 G--GWQYSTFSGFLVF 199
GW S FSGFL++
Sbjct: 259 SDPGWADSLFSGFLLY 274
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 48.1 bits (113), Expect = 5e-06
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 70 KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LESVFVAPRKGIYSFSFHVIK 128
K AFS +T++ + I F+++L N G + F+ GIY FS+ +
Sbjct: 154 KSAFSVGITTSYPEERLP-----IIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDI-- 206
Query: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKL---EKGNLV 185
++ + + L+ NG+ I F + + A+ ++YL ED+V+L++ ++ L
Sbjct: 207 TLANKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLF 265
Query: 186 G--GWQYSTFSGFLVF 199
GW S FSGFL++
Sbjct: 266 SDPGWADSLFSGFLLY 281
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 54 GSSSSP-LGISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LESV 111
G P G+ +A++ AF+AV ++ S M K FD+ L N + + +
Sbjct: 557 GKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVK-----FDRTLYNGHSGYNPATGI 611
Query: 112 FVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDK 171
F P G+Y F++HV + + V L N P + K + A+ G +L L
Sbjct: 612 FTCPVGGVYYFAYHV--HVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRP 669
Query: 172 EDKVYLKLEKGNLVGGWQ----YSTFSGFLVFP 200
D+V++++ G + +S+FSGFL+ P
Sbjct: 670 NDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCP 702
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 46.2 bits (108), Expect = 2e-05
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 73 FSAVRSTNHEPSEMSNKTRIIYFDQILVNV-GNFFTLESVFVAPRKGIYSFSFHVIKVYQ 131
F+ R T+ P+ S +I F+ +L N G++ T F G+Y F +H
Sbjct: 122 FTVTRQTHQPPAPNS----LIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS---H 174
Query: 132 SQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGWQ-- 189
+ + V L +G V++ F G T + + GVLL L ++V+L + + G Q
Sbjct: 175 TANLCVLLYRSGVKVVT-FCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGS 233
Query: 190 YSTFSGFLVFP 200
S FSGFL+FP
Sbjct: 234 DSVFSGFLLFP 244
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 46.2 bits (108), Expect = 2e-05
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 73 FSAVRSTNHEPSEMSNKTRIIYFDQILVNV-GNFFTLESVFVAPRKGIYSFSFHVIKVYQ 131
F+ R T+ P+ S +I F+ +L N G++ T F G+Y F +H
Sbjct: 122 FTVTRQTHQPPAPNS----LIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS---H 174
Query: 132 SQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGWQ-- 189
+ + V L +G V++ F G T + + GVLL L ++V+L + + G Q
Sbjct: 175 TANLCVLLYRSGVKVVT-FCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGS 233
Query: 190 YSTFSGFLVFP 200
S FSGFL+FP
Sbjct: 234 DSVFSGFLLFP 244
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 46.2 bits (108), Expect = 2e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 93 IYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFA 151
I FD+IL N + + +F GIY FS+HV + + V L NG PV+ +
Sbjct: 569 IPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHV--HVKGTHVWVGLYKNGTPVMYTYD 626
Query: 152 GDKDVTREAATNGVLLYLDKEDKVYLKL----EKGNLVGGWQYSTFSGFLVFPL 201
+ A+ ++ L + D+V+L+L G + +S+FSGFLV P+
Sbjct: 627 EYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLVAPM 680
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 45.8 bits (107), Expect = 2e-05
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 48 PATDSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPS-EMSNKTRI-----------IYF 95
P +G +G+ + A+ A + N P+ EM T + F
Sbjct: 576 PTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKF 635
Query: 96 DQILVNVG-NFFTLESVFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDK 154
+++L N N+ +F G+Y F++HV + + V L N +PV+ + K
Sbjct: 636 NKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVH--CKGGNVWVALFKNNEPVMYTYDEYK 693
Query: 155 DVTREAATNGVLLYLDKEDKVYLKLEK----GNLVGGWQYSTFSGFLVFPL 201
+ A+ +L L D+V+L++ G G + +S+FSG+L++P+
Sbjct: 694 KGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM 744
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 45.8 bits (107), Expect = 2e-05
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 48 PATDSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPS-EMSNKTRI-----------IYF 95
P +G +G+ + A+ A + N P+ EM T + F
Sbjct: 576 PTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKF 635
Query: 96 DQILVNVG-NFFTLESVFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDK 154
+++L N N+ +F G+Y F++HV + + V L N +PV+ + K
Sbjct: 636 NKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVH--CKGGNVWVALFKNNEPVMYTYDEYK 693
Query: 155 DVTREAATNGVLLYLDKEDKVYLKLEK----GNLVGGWQYSTFSGFLVFPL 201
+ A+ +L L D+V+L++ G G + +S+FSG+L++P+
Sbjct: 694 KGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM 744
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 44.7 bits (104), Expect = 5e-05
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 53 KGSSSSPLGISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLESV- 111
KG+ SP I + + AFSA+R P N ++ FD ++ N + S
Sbjct: 100 KGTKGSPGNIKDQP---RPAFSAIR---RNPPMGGN---VVIFDTVITNQEEPYQNHSGR 150
Query: 112 FVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTR----EAATNGVLL 167
FV G Y F+F V+ ++ I ++++ + + + G D T + + G++L
Sbjct: 151 FVCTVPGYYYFTFQVLSQWE---ICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVL 207
Query: 168 YLDKEDKVYLKLE--KGNLVGGWQY-STFSGFLVFP 200
L + D+V+++ + KG++ G + S FSGFL+FP
Sbjct: 208 QLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLIFP 243
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 40.4 bits (93), Expect = 0.001
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 50 TDSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPSEMSNK-TRIIYFDQILVNVGNFFTL 108
T KGS A + AFSA S P + K +I+Y DQ GN+ +
Sbjct: 322 TGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPIKFEKILYNDQ-----GNYSPV 376
Query: 109 ESVFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLY 168
F G Y FS+H+ + + +++L+ K + + A+ V+L
Sbjct: 377 TGKFNCSIPGTYVFSYHI--TVRGRPARISLVAQNKKQFKSRETLYGQEIDQASLLVILK 434
Query: 169 LDKEDKVYLKLEK---GNLVGGWQYSTFSGFLVFP 200
L D+V+L++ K G V S F+GFL++P
Sbjct: 435 LSAGDQVWLEVSKDWNGVYVSAEDDSIFTGFLLYP 469
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 38.1 bits (87), Expect = 0.005
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 72 AFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFHVIKVY 130
AFS R T E + + F+++ VN+ F + + F AP +GIY FS +V
Sbjct: 145 AFSVGRKTALHSGE---DFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWN 201
Query: 131 QSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGW-- 188
+T V++M N K + +A + + V+L L D+V+++L K
Sbjct: 202 YKET-YVHIMHNQKEAVILYAQPSE-RSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYS 259
Query: 189 ----QYSTFSGFLV 198
Y TFSG L+
Sbjct: 260 NDFDTYITFSGHLI 273
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 38.1 bits (87), Expect = 0.005
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 72 AFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLES-VFVAPRKGIYSFSFHVIKVY 130
AFS R T E + + F+++ VN+ F + + F AP +GIY FS +V
Sbjct: 145 AFSVGRKTALHSGE---DFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWN 201
Query: 131 QSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGW-- 188
+T V++M N K + +A + + V+L L D+V+++L K
Sbjct: 202 YKET-YVHIMHNQKEAVILYAQPSE-RSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYS 259
Query: 189 ----QYSTFSGFLV 198
Y TFSG L+
Sbjct: 260 NDFDTYITFSGHLI 273
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 37.0 bits (84), Expect = 0.011
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 118 GIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYL 177
G+Y F++H I VY ++V+L K ++ + ++ + A+ VLL+L+ D+V+L
Sbjct: 156 GLYYFAYH-ITVYMKD-VKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWL 213
Query: 178 KL-----EKGNLVGGWQYSTFSGFLVF 199
++ G STF+GFL++
Sbjct: 214 QVYGEGERNGLYADNDNDSTFTGFLLY 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,074,763
Number of Sequences: 37866
Number of extensions: 293231
Number of successful extensions: 789
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 741
Number of HSP's gapped (non-prelim): 53
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.