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Search of human proteins with 17025230
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17025230 potassium channel, subfamily K, member 17 isoform 1
[Homo sapiens]
(332 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17025230 potassium channel, subfamily K, member 17 isoform 1 ... 689 0.0
gi|205361107 potassium channel, subfamily K, member 17 isoform 2... 466 e-131
gi|205360983 potassium channel, subfamily K, member 16 isoform 3... 228 6e-60
gi|14149764 potassium channel, subfamily K, member 16 isoform 2 ... 228 6e-60
gi|205360973 potassium channel, subfamily K, member 16 isoform 4... 194 7e-50
gi|205360971 potassium channel, subfamily K, member 16 isoform 1... 194 1e-49
gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens] 178 7e-45
gi|15718767 TRAAK [Homo sapiens] 167 9e-42
gi|20143946 potassium channel, subfamily K, member 10 isoform 3 ... 153 2e-37
gi|20143944 potassium channel, subfamily K, member 10 isoform 2 ... 153 2e-37
gi|10863961 potassium channel, subfamily K, member 10 isoform 1 ... 153 2e-37
gi|14589851 potassium channel, subfamily K, member 2 isoform b [... 150 1e-36
gi|126365795 potassium channel, subfamily K, member 2 isoform c ... 150 1e-36
gi|62912487 potassium channel, subfamily K, member 2 isoform a [... 150 1e-36
gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens] 136 2e-32
gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens] 120 2e-27
gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens] 116 2e-26
gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens] 112 6e-25
gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens] 105 6e-23
gi|16118231 potassium channel, subfamily K, member 7 isoform A [... 97 2e-20
gi|16118235 potassium channel, subfamily K, member 7 isoform B [... 95 8e-20
gi|16118233 potassium channel, subfamily K, member 7 isoform B [... 95 8e-20
gi|5031821 potassium channel, subfamily K, member 7 isoform C [H... 94 1e-19
gi|16306555 potassium channel, subfamily K, member 13 [Homo sapi... 84 2e-16
gi|11545761 potassium channel, subfamily K, member 12 [Homo sapi... 83 3e-16
gi|32469495 potassium channel, subfamily K, member 18 [Homo sapi... 49 6e-06
gi|27886667 potassium voltage-gated channel, subfamily H, member... 45 7e-05
gi|22024390 potassium voltage-gated channel, subfamily H, member... 45 9e-05
gi|27886648 potassium voltage-gated channel, subfamily H, member... 45 9e-05
gi|27886646 potassium voltage-gated channel, subfamily H, member... 45 9e-05
>gi|17025230 potassium channel, subfamily K, member 17 isoform 1
[Homo sapiens]
Length = 332
Score = 689 bits (1779), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW
Sbjct: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
Query: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG
Sbjct: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
Query: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA
Sbjct: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
Query: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLW 240
GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLW
Sbjct: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLW 240
Query: 241 YKNMVSLWILFGMAWLALIIKLILSQLETPGRVCSCCHHSSKEDFKSQSWRQGPDREPES 300
YKNMVSLWILFGMAWLALIIKLILSQLETPGRVCSCCHHSSKEDFKSQSWRQGPDREPES
Sbjct: 241 YKNMVSLWILFGMAWLALIIKLILSQLETPGRVCSCCHHSSKEDFKSQSWRQGPDREPES 300
Query: 301 HSPQQGCYPEGPMGIIQHLEPSAHAAGCGKDS 332
HSPQQGCYPEGPMGIIQHLEPSAHAAGCGKDS
Sbjct: 301 HSPQQGCYPEGPMGIIQHLEPSAHAAGCGKDS 332
>gi|205361107 potassium channel, subfamily K, member 17 isoform 2
[Homo sapiens]
Length = 271
Score = 466 bits (1199), Expect = e-131
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW
Sbjct: 1 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 60
Query: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG
Sbjct: 61 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 120
Query: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA
Sbjct: 121 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA 180
Query: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI 229
GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI
Sbjct: 181 GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVI 229
>gi|205360983 potassium channel, subfamily K, member 16 isoform 3
[Homo sapiens]
Length = 294
Score = 228 bits (581), Expect = 6e-60
Identities = 114/261 (43%), Positives = 169/261 (64%), Gaps = 17/261 (6%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWY 241
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+G +PS+ Y Y
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVY 232
Query: 242 KNMVSLWILFGMAWLALIIKL 262
+++ ++WIL G+AWLALI+ L
Sbjct: 233 RSLAAIWILLGLAWLALILPL 253
>gi|14149764 potassium channel, subfamily K, member 16 isoform 2
[Homo sapiens]
Length = 309
Score = 228 bits (581), Expect = 6e-60
Identities = 114/261 (43%), Positives = 169/261 (64%), Gaps = 17/261 (6%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWY 241
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+G +PS+ Y Y
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVY 232
Query: 242 KNMVSLWILFGMAWLALIIKL 262
+++ ++WIL G+AWLALI+ L
Sbjct: 233 RSLAAIWILLGLAWLALILPL 253
>gi|205360973 potassium channel, subfamily K, member 16 isoform 4
[Homo sapiens]
Length = 262
Score = 194 bits (494), Expect = 7e-50
Identities = 99/230 (43%), Positives = 146/230 (63%), Gaps = 17/230 (7%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGM 231
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+G+
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGL 222
>gi|205360971 potassium channel, subfamily K, member 16 isoform 1
[Homo sapiens]
Length = 322
Score = 194 bits (492), Expect = 1e-49
Identities = 99/229 (43%), Positives = 145/229 (63%), Gaps = 17/229 (7%)
Query: 10 PEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCL 69
P + C + LLLAY+ YL LG +F LE +A S FQ +K L+N+TCL
Sbjct: 2 PSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL 61
Query: 70 DRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAA 129
D+ A++ ++ +++A+ G + N+T+ W+ SFFF+ + +TTIGYGNL+P+T A
Sbjct: 62 DQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAG 121
Query: 130 RLFCIFFALVGIPLNLVVLNRLG-----HLMQQGVNHWASRLGGTWQDPDKARWLAGSGA 184
++FC+F+AL+GIPLN++ LN LG HL + W R P +++ L G
Sbjct: 122 QVFCVFYALLGIPLNVIFLNHLGTGLRAHL--AAIERWEDR-------PRRSQVLQVLGL 172
Query: 185 ---LLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIG 230
L G L+ L+ PP++FSH+EGWS++EGFYFAFITLST+GFGDYV+G
Sbjct: 173 ALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVG 221
>gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens]
Length = 499
Score = 178 bits (451), Expect = 7e-45
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 1/264 (0%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQ 83
LL A + YLA+G +F LE +++ +++ K LL+ F CL + LD ++ V
Sbjct: 7 LLTSAIIFYLAIGAAIFEVLEEPHWKEAKKNYYTQKLHLLKEFPCLGQEGLDKILEVVSD 66
Query: 84 AYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
A G ++ N T W + F+ + ITTIGYGN++P T A RLFC+F+ L G+PL
Sbjct: 67 AAGQGVAITGNQT-FNNWNWPNAMIFAATVITTIGYGNVAPKTPAGRLFCVFYGLFGVPL 125
Query: 144 NLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLLFSHM 203
L ++ LG L KA+ ++ G+L+ L++PP +F
Sbjct: 126 CLTWISALGKFFGGRAKRLGQFLTKRGVSLRKAQITCTVIFIVWGVLVHLVIPPFVFMVT 185
Query: 204 EGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALIIKLI 263
EGW+Y EG Y++FIT+ST+GFGD+V G+NPS Y Y+ V LWI G+AWL+L +
Sbjct: 186 EGWNYIEGLYYSFITISTIGFGDFVAGVNPSANYHALYRYFVELWIYLGLAWLSLFVNWK 245
Query: 264 LSQLETPGRVCSCCHHSSKEDFKS 287
+S + KE F+S
Sbjct: 246 VSMFVEVHKAIKKRRRRRKESFES 269
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 167 bits (424), Expect = 9e-42
Identities = 106/260 (40%), Positives = 145/260 (55%), Gaps = 9/260 (3%)
Query: 21 STVLLLLAY-LAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIR 79
+T+L LLA L YL G VF LE Q + R + + L+ C+ L LI+
Sbjct: 4 TTLLALLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAHPCVSDQELGLLIK 63
Query: 80 DVVQAYKNGASLLSNTTSMGR---WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFF 136
+V A GA +N+TS W+L +FFFS + ITTIGYGN++ T A RLFCIF+
Sbjct: 64 EVADALGGGADPETNSTSNSSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFY 123
Query: 137 ALVGIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLF 192
ALVGIPL ++L +RLG ++ G+ H + P+ R L+ LL G LLF
Sbjct: 124 ALVGIPLFGILLAGVGDRLGSSLRHGIGHIEAIFLKWHVPPELVRVLSAMLFLLIGCLLF 183
Query: 193 LLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFG 252
+L P +F +ME WS E YF +TL+TVGFGDYV G +P Q P Y+ +V WIL G
Sbjct: 184 VLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPA-YQPLVWFWILLG 242
Query: 253 MAWLALIIKLILSQLETPGR 272
+A+ A ++ I + L R
Sbjct: 243 LAYFASVLTTIGNWLRVVSR 262
>gi|20143946 potassium channel, subfamily K, member 10 isoform 3
[Homo sapiens]
Length = 543
Score = 153 bits (387), Expect = 2e-37
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 5/248 (2%)
Query: 21 STVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRD 80
+ V + + + YL G VF LE + +K E L++ C+ L++LI+
Sbjct: 76 TVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQH 135
Query: 81 VVQAYKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+ A G S + N+++ W+L +FFF+ + ITTIGYGN++P+T ++FCI +A+
Sbjct: 136 ALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIF 195
Query: 140 GIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLL 195
GIPL +L ++LG + + + K R ++ +L+G ++F+ +
Sbjct: 196 GIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTI 255
Query: 196 PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAW 255
P ++F ++EGW+ E YF +TL+TVGFGD+V G N Y WYK +V WIL G+A+
Sbjct: 256 PAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYKPLVWFWILVGLAY 315
Query: 256 LALIIKLI 263
A ++ +I
Sbjct: 316 FAAVLSMI 323
>gi|20143944 potassium channel, subfamily K, member 10 isoform 2
[Homo sapiens]
Length = 543
Score = 153 bits (387), Expect = 2e-37
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 5/248 (2%)
Query: 21 STVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRD 80
+ V + + + YL G VF LE + +K E L++ C+ L++LI+
Sbjct: 76 TVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQH 135
Query: 81 VVQAYKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+ A G S + N+++ W+L +FFF+ + ITTIGYGN++P+T ++FCI +A+
Sbjct: 136 ALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIF 195
Query: 140 GIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLL 195
GIPL +L ++LG + + + K R ++ +L+G ++F+ +
Sbjct: 196 GIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTI 255
Query: 196 PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAW 255
P ++F ++EGW+ E YF +TL+TVGFGD+V G N Y WYK +V WIL G+A+
Sbjct: 256 PAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYKPLVWFWILVGLAY 315
Query: 256 LALIIKLI 263
A ++ +I
Sbjct: 316 FAAVLSMI 323
>gi|10863961 potassium channel, subfamily K, member 10 isoform 1
[Homo sapiens]
Length = 538
Score = 153 bits (387), Expect = 2e-37
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 5/248 (2%)
Query: 21 STVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRD 80
+ V + + + YL G VF LE + +K E L++ C+ L++LI+
Sbjct: 71 TVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQH 130
Query: 81 VVQAYKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+ A G S + N+++ W+L +FFF+ + ITTIGYGN++P+T ++FCI +A+
Sbjct: 131 ALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIF 190
Query: 140 GIPLNLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLL 195
GIPL +L ++LG + + + K R ++ +L+G ++F+ +
Sbjct: 191 GIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTI 250
Query: 196 PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAW 255
P ++F ++EGW+ E YF +TL+TVGFGD+V G N Y WYK +V WIL G+A+
Sbjct: 251 PAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYKPLVWFWILVGLAY 310
Query: 256 LALIIKLI 263
A ++ +I
Sbjct: 311 FAAVLSMI 318
>gi|14589851 potassium channel, subfamily K, member 2 isoform b
[Homo sapiens]
Length = 411
Score = 150 bits (380), Expect = 1e-36
Identities = 87/244 (35%), Positives = 135/244 (55%), Gaps = 6/244 (2%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
+ L + YL +G VF LE + K + +C++ LD LI+ +V A
Sbjct: 50 IFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAA 109
Query: 85 YKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
G L NT++ + W+L SFFF+ + ITTIG+GN+SP T ++FCI +AL+GIPL
Sbjct: 110 INAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPL 169
Query: 144 NLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLL 199
+L ++LG + +G+ K R ++ +L G +LF+ LP ++
Sbjct: 170 FGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAII 229
Query: 200 FSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALI 259
F H+EGWS + YF ITL+T+GFGDYV G + + Y +YK +V WIL G+A+ A +
Sbjct: 230 FKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIE-YLDFYKPVVWFWILVGLAYFAAV 288
Query: 260 IKLI 263
+ +I
Sbjct: 289 LSMI 292
>gi|126365795 potassium channel, subfamily K, member 2 isoform c
[Homo sapiens]
Length = 426
Score = 150 bits (380), Expect = 1e-36
Identities = 87/244 (35%), Positives = 135/244 (55%), Gaps = 6/244 (2%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
+ L + YL +G VF LE + K + +C++ LD LI+ +V A
Sbjct: 65 IFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAA 124
Query: 85 YKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
G L NT++ + W+L SFFF+ + ITTIG+GN+SP T ++FCI +AL+GIPL
Sbjct: 125 INAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPL 184
Query: 144 NLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLL 199
+L ++LG + +G+ K R ++ +L G +LF+ LP ++
Sbjct: 185 FGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAII 244
Query: 200 FSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALI 259
F H+EGWS + YF ITL+T+GFGDYV G + + Y +YK +V WIL G+A+ A +
Sbjct: 245 FKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIE-YLDFYKPVVWFWILVGLAYFAAV 303
Query: 260 IKLI 263
+ +I
Sbjct: 304 LSMI 307
>gi|62912487 potassium channel, subfamily K, member 2 isoform a
[Homo sapiens]
Length = 422
Score = 150 bits (380), Expect = 1e-36
Identities = 87/244 (35%), Positives = 135/244 (55%), Gaps = 6/244 (2%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
+ L + YL +G VF LE + K + +C++ LD LI+ +V A
Sbjct: 61 IFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAA 120
Query: 85 YKNGASLLSNTTS-MGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPL 143
G L NT++ + W+L SFFF+ + ITTIG+GN+SP T ++FCI +AL+GIPL
Sbjct: 121 INAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPL 180
Query: 144 NLVVL----NRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLL 199
+L ++LG + +G+ K R ++ +L G +LF+ LP ++
Sbjct: 181 FGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAII 240
Query: 200 FSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALI 259
F H+EGWS + YF ITL+T+GFGDYV G + + Y +YK +V WIL G+A+ A +
Sbjct: 241 FKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIE-YLDFYKPVVWFWILVGLAYFAAV 299
Query: 260 IKLI 263
+ +I
Sbjct: 300 LSMI 303
>gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens]
Length = 313
Score = 136 bits (343), Expect = 2e-32
Identities = 84/248 (33%), Positives = 133/248 (53%), Gaps = 16/248 (6%)
Query: 26 LLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQAY 85
L AY AYL LG + LEG + + +LLQ C+ PALD+ + V+ A
Sbjct: 11 LAAYAAYLVLGALLVARLEGPHEARLRAELETLRAQLLQRSPCVAAPALDAFVERVLAAG 70
Query: 86 KNGASLLSNTTSMGR-----WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVG 140
+ G +L+N + W+ + FF+ + ITT+GYG +P T A + F I FAL+G
Sbjct: 71 RLGRVVLANASGSANASDPAWDFASALFFASTLITTVGYGYTTPLTDAGKAFSIAFALLG 130
Query: 141 IPLNLVVLN----RLGHLMQQGVNHWASRLGGTWQDPDKARW--LAGSGALLSGLLLFLL 194
+P +++L RL L+ W S G W A W +A G +++ + L
Sbjct: 131 VPTTMLLLTASAQRLSLLLTHVPLSWLSMRWG-WDPRRAACWHLVALLGVVVT---VCFL 186
Query: 195 LPPLLFSHME-GWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGM 253
+P ++F+H+E WS+ + FYF FI+LST+G GDYV G P Q Y YK +V++++ G+
Sbjct: 187 VPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYVPGEAPGQPYRALYKVLVTVYLFLGL 246
Query: 254 AWLALIIK 261
+ L+++
Sbjct: 247 VAMVLVLQ 254
>gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens]
Length = 336
Score = 120 bits (300), Expect = 2e-27
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 15/246 (6%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
L+L YL YL G VF ++E + ++ K L+ CL L+ + V++A
Sbjct: 26 LVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHECLSEQQLEQFLGRVLEA 85
Query: 85 YKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLN 144
G S+LSN + W+ + FF+ + ++T GYG+ P + + FCI ++++GIP
Sbjct: 86 SNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFT 145
Query: 145 LVVLNRL-----GHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLL---LFLLLP 196
L+ L + H+ ++ V ++ R G + Q +A A+L G + F +P
Sbjct: 146 LLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQ------VVAIVHAVLLGFVTVSCFFFIP 199
Query: 197 PLLFSHME-GWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAW 255
+FS +E W++ E FYF FI+LST+G GDYV G +Q++ YK ++ ++L G+
Sbjct: 200 AAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIA 259
Query: 256 LALIIK 261
+ ++++
Sbjct: 260 MLVVLE 265
>gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens]
Length = 330
Score = 116 bits (291), Expect = 2e-26
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 23/248 (9%)
Query: 25 LLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQA 84
L+L L YL +G VF LE A R + + L + F L R +QA
Sbjct: 11 LVLCTLCYLLVGAAVFDALESEAESGRQRLLVQKRGALRRKFG-FSAEDYRELERLALQA 69
Query: 85 YKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLN 144
+ A +W+ GSF+F+++ ITTIGYG+ +P T + ++FC+F+AL+GIPL
Sbjct: 70 EPHRAGR--------QWKFPGSFYFAITVITTIGYGHAAPGTDSGKVFCMFYALLGIPLT 121
Query: 145 LVVLNRLGHLMQQGVNHWASR----LGGTWQDPDKARWLAGSGALLSGLL---LFLLLPP 197
LV LG + V LG W ++ +++GLL L L
Sbjct: 122 LVTFQSLGERLNAVVRRLLLAAKCCLGLRW------TCVSTENLVVAGLLACAATLALGA 175
Query: 198 LLFSHMEGWSYTEGFYFAFITLSTVGFGDYV-IGMNPSQRYPLWYKNMVSLWILFGMAWL 256
+ FSH EGW++ +Y+ FITL+T+GFGD+V + + + L Y L+IL G+ +
Sbjct: 176 VAFSHFEGWTFFHAYYYCFITLTTIGFGDFVALQSGEALQRKLPYVAFSFLYILLGLTVI 235
Query: 257 ALIIKLIL 264
+ L++
Sbjct: 236 GAFLNLVV 243
>gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens]
Length = 394
Score = 112 bits (279), Expect = 6e-25
Identities = 76/254 (29%), Positives = 128/254 (50%), Gaps = 19/254 (7%)
Query: 22 TVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDV 81
T+ L++ YL +G VF LE + + + EL + L + + L R V
Sbjct: 8 TLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYN-LSQGGYEELERVV 66
Query: 82 VQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGI 141
++ + A + +W GSF+F+++ ITTIGYG+ +P+T ++FC+F+AL+GI
Sbjct: 67 LRLKPHKAGV--------QWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGI 118
Query: 142 PLNLVVLNRLGHLMQQGVNHWASR----LGGTWQDPDKARW-LAGSGALLSGLLLFLLLP 196
PL LV+ LG + V + R LG D A L G + +S L +
Sbjct: 119 PLTLVMFQSLGERINTLVRYLLHRAKKGLGMRRADVSMANMVLIGFFSCIS----TLCIG 174
Query: 197 PLLFSHMEGWSYTEGFYFAFITLSTVGFGDYV-IGMNPSQRYPLWYKNMVSLWILFGMAW 255
FSH E W++ + +Y+ FITL+T+GFGDYV + + + + Y ++IL G+
Sbjct: 175 AAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTV 234
Query: 256 LALIIKLILSQLET 269
+ + L++ + T
Sbjct: 235 IGAFLNLVVLRFMT 248
>gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens]
Length = 374
Score = 105 bits (262), Expect = 6e-23
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 31/260 (11%)
Query: 22 TVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELL--QNFTCLDRPALDSLIR 79
T+ L++ YL +G VF LE + ++ + N + D L+ +I
Sbjct: 8 TLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYRQLELVI- 66
Query: 80 DVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+Q+ + A + +W+ GSF+F+++ ITTIGYG+ +P T A + FC+F+A++
Sbjct: 67 --LQSEPHRAGV--------QWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVL 116
Query: 140 GIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLAGSGALLSGLLLF------- 192
GIPL LV+ LG M V + R+ K + + + ++
Sbjct: 117 GIPLTLVMFQSLGERMNTFVRYLLKRI-------KKCCGMRNTDVSMENMVTVGFFSCMG 169
Query: 193 -LLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPS--QRYPLWYKNMVSLWI 249
L + FS E WS+ +Y+ FITL+T+GFGDYV Q+ PL Y ++I
Sbjct: 170 TLCIGAAAFSQCEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPL-YVAFSFMYI 228
Query: 250 LFGMAWLALIIKLILSQLET 269
L G+ + + L++ + T
Sbjct: 229 LVGLTVIGAFLNLVVLRFLT 248
>gi|16118231 potassium channel, subfamily K, member 7 isoform A
[Homo sapiens]
Length = 307
Score = 97.4 bits (241), Expect = 2e-20
Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 13/259 (5%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSL--WILFGMAW 255
+ ++G S YF F +LST+G D + G S +++ ++L ++L G+
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLGYLLLGLLA 248
Query: 256 LALIIKLI--LSQLETPGR 272
+ L ++ L Q+ G+
Sbjct: 249 MLLAVETFSELPQVRAMGK 267
>gi|16118235 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 95.1 bits (235), Expect = 8e-20
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSL----WILFGM 253
+ ++G S YF F +LST+G D + G S +++ ++L L G
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLGGGTSLQGT 248
Query: 254 AW 255
AW
Sbjct: 249 AW 250
>gi|16118233 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 95.1 bits (235), Expect = 8e-20
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSL----WILFGM 253
+ ++G S YF F +LST+G D + G S +++ ++L L G
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLGGGTSLQGT 248
Query: 254 AW 255
AW
Sbjct: 249 AW 250
>gi|5031821 potassium channel, subfamily K, member 7 isoform C [Homo
sapiens]
Length = 257
Score = 94.4 bits (233), Expect = 1e-19
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
Query: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
Query: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
Query: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSL 247
+ ++G S YF F +LST+G D + G S +++ ++L
Sbjct: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLAL 238
>gi|16306555 potassium channel, subfamily K, member 13 [Homo
sapiens]
Length = 408
Score = 84.0 bits (206), Expect = 2e-16
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 23 VLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWELLQNFTC---LDRPALDSLIR 79
+LL + YL G VF LE + + + ++ E L NF+ L R L +R
Sbjct: 21 LLLAALIVLYLLGGAAVFSALELAHERQAKQRWE----ERLANFSRGHNLSRDELRGFLR 76
Query: 80 DVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALV 139
+A + G + RW+ G+F+F + ++TIG+G +P T+ ++F IF+ LV
Sbjct: 77 HYEEATRAGIRV---DNVRPRWDFTGAFYFVGTVVSTIGFGMTTPATVGGKIFLIFYGLV 133
Query: 140 GIPLNLVVLNR--------LGHLMQQGVNHWASRLGGTWQDPDK------ARWLAGSGAL 185
G ++ N + ++M+ R G Q+ K LAG
Sbjct: 134 GCSSTILFFNLFLERLITIIAYIMKSCHQRQLRRRGALPQESLKDAGQCEVDSLAGWKPS 193
Query: 186 LSGLLLFLLLPPLL--------FSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRY 237
+ ++L L +L ++ +EGWSY + YF F+ ST+GFGD V N
Sbjct: 194 VYYVMLILCTASILISCCASAMYTPIEGWSYFDSLYFCFVAFSTIGFGDLVSSQNAHYES 253
Query: 238 PLWYKNMVSLWILFGMAWLALIIKLI 263
Y+ ++IL G+ + + +I
Sbjct: 254 QGLYRFANFVFILMGVCCIYSLFNVI 279
>gi|11545761 potassium channel, subfamily K, member 12 [Homo
sapiens]
Length = 430
Score = 83.2 bits (204), Expect = 3e-16
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 42/288 (14%)
Query: 23 VLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW-ELLQNFTC---LDRPALDSLI 78
VLL YL G VF LE ++ R +W L+NF+ + P L + +
Sbjct: 40 VLLAALIGLYLVAGATVFSALESPGEAEA-----RARWGATLRNFSAAHGVAEPELRAFL 94
Query: 79 RDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFAL 138
R A G RW+ G+F+F + ++TIG+G +P T+ + F I + L
Sbjct: 95 RHYEAALAAGVRA---DALRPRWDFPGAFYFVGTVVSTIGFGMTTPATVGGKAFLIAYGL 151
Query: 139 VGIPLNLVVLN-----------------RLGHLMQQGVNHWASRLGGTWQDPDK-ARWLA 180
G ++ N R L + G+ R G + D A W
Sbjct: 152 FGCAGTILFFNLFLERIISLLAFIMRACRERQLRRSGLLPATFRRGSALSEADSLAGWKP 211
Query: 181 GSGALLSGLLLFLLL----PPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQR 236
+L L LF +L +++ +EGW Y + YF F+T ST+GFGD V + + R
Sbjct: 212 SVYHVLLILGLFAVLLSCCASAMYTSVEGWDYVDSLYFCFVTFSTIGFGDLVSSQHAAYR 271
Query: 237 YPLWYKNMVSLWILFGMAW-------LALIIKLILSQLETPGRVCSCC 277
Y+ L+IL G+ ++++IK +L+ + C CC
Sbjct: 272 NQGLYRLGNFLFILLGVCCIYSLFNVISILIKQVLNWM-LRKLSCRCC 318
>gi|32469495 potassium channel, subfamily K, member 18 [Homo
sapiens]
Length = 384
Score = 48.9 bits (115), Expect = 6e-06
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 101 WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLM 155
W + S FF + +T+GYG + P T + C+ +AL GIPL +VL G ++
Sbjct: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDIL 155
Score = 39.3 bits (90), Expect = 0.005
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 208 YTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALIIKLILSQL 267
+ FYF F+TL+T+GFGD V+ +P ++ S++I+ GM + + KL+ ++L
Sbjct: 310 FENAFYFCFVTLTTIGFGDTVL------EHPNFFL-FFSIYIIVGMEIVFIAFKLVQNRL 362
Score = 30.4 bits (67), Expect = 2.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 197 PLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWL 256
P F+ WS+ +F STVG+G Y+ + +Y + L+ LFG+ +
Sbjct: 92 PQWFNRTTHWSFLSSLFFCCTVFSTVGYG-YIYPVTRLGKY------LCMLYALFGIPLM 144
Query: 257 ALII 260
L++
Sbjct: 145 FLVL 148
>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
[Homo sapiens]
Length = 1107
Score = 45.4 bits (106), Expect = 7e-05
Identities = 17/60 (28%), Positives = 40/60 (66%)
Query: 104 VGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWA 163
+ + +F++S++T++G+GN+S NT A ++F I L+G ++ +V + ++Q+ + W+
Sbjct: 422 IAALYFTLSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWS 481
>gi|22024390 potassium voltage-gated channel, subfamily H, member 5
isoform 1 [Homo sapiens]
Length = 988
Score = 45.1 bits (105), Expect = 9e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 96 TSMGRWE--------LVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVV 147
TS G WE V S +F+++++TTIG+GN++P T ++F + +VG L +
Sbjct: 404 TSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 463
Query: 148 LNRLGHLMQQ 157
+ + QQ
Sbjct: 464 FGNVTTIFQQ 473
>gi|27886648 potassium voltage-gated channel, subfamily H, member 5
isoform 2 [Homo sapiens]
Length = 624
Score = 45.1 bits (105), Expect = 9e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 96 TSMGRWE--------LVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVV 147
TS G WE V S +F+++++TTIG+GN++P T ++F + +VG L +
Sbjct: 346 TSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 405
Query: 148 LNRLGHLMQQ 157
+ + QQ
Sbjct: 406 FGNVTTIFQQ 415
>gi|27886646 potassium voltage-gated channel, subfamily H, member 5
isoform 3 [Homo sapiens]
Length = 611
Score = 45.1 bits (105), Expect = 9e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 96 TSMGRWE--------LVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVV 147
TS G WE V S +F+++++TTIG+GN++P T ++F + +VG L +
Sbjct: 404 TSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 463
Query: 148 LNRLGHLMQQ 157
+ + QQ
Sbjct: 464 FGNVTTIFQQ 473
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,784,374
Number of Sequences: 37866
Number of extensions: 621749
Number of successful extensions: 1825
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 188
length of query: 332
length of database: 18,247,518
effective HSP length: 103
effective length of query: 229
effective length of database: 14,347,320
effective search space: 3285536280
effective search space used: 3285536280
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.