Guide to the Human Genome
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Name: KCNK7 Sequence: fasta or formatted (252aa) NCBI GI: 16118233
Description:

potassium channel, subfamily K, member 7 isoform B

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [307aa] potassium channel, subfamily K, member 7 isoform A
alt mRNA [252aa] potassium channel, subfamily K, member 7 isoform B
alt prot [257aa] potassium channel, subfamily K, member 7 isoform C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.7         37           2
 C cysteine            2.4          6           1
 D aspartate           1.2          3           1
 E glutamate           3.6          9           2
 F phenylalanine       2.8          7           1
 G glycine            11.5         29           3
 H histidine           3.2          8           1
 I isoleucine          1.2          3           1
 K lysine              0.4          1           1
 L leucine            21.0         53           2
 M methionine          1.2          3           1
 N asparagine          0.4          1           1
 P proline             6.0         15           2
 Q glutamine           3.6          9           1
 R arginine            4.8         12           1
 S serine              7.1         18           2
 T threonine           4.4         11           3
 V valine              6.3         16           2
 W tryptophan          2.4          6           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 7 isoform B [... 
KCNK7                 1.000   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.948   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.946   potassium channel, subfamily K, member 7 isoform A [...
KCNK1                 0.307   potassium channel, subfamily K, member 1 
KCNK6                 0.223   potassium channel, subfamily K, member 6 
KCNK2                 0.177   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.177   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.177   potassium channel, subfamily K, member 2 isoform a [...
KCNK10                0.177   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.177   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.177   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK16                0.173   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.173   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK16                0.167   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.167   potassium channel, subfamily K, member 16 isoform 1...
KCNK17                0.146   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK17                0.140   potassium channel, subfamily K, member 17 isoform 2...
KCNK4                 0.136   TRAAK 
KCNK15                0.129   potassium family, subfamily K, member 15 
KCNK3                 0.123   potassium channel, subfamily K, member 3 
KCNK5                 0.117   potassium channel, subfamily K, member 5 
KCNK9                 0.104   potassium channel, subfamily K, member 9 
KCNK12                0.092   potassium channel, subfamily K, member 12 
KCNK13                0.061   potassium channel, subfamily K, member 13 
KCNK18                0.046   potassium channel, subfamily K, member 18 
PPOX                  0.023   protoporphyrinogen oxidase 
PPOX                  0.023   protoporphyrinogen oxidase 
KCNA10                0.019   potassium voltage-gated channel, shaker-related subfa...
KCNA7                 0.017   potassium voltage-gated channel, shaker-related subf...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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