Guide to the Human Genome
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Name: KCNK18 Sequence: fasta or formatted (384aa) NCBI GI: 32469495
Description:

potassium channel, subfamily K, member 18

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         22           3
 C cysteine            3.9         15           2
 D aspartate           3.6         14           2
 E glutamate           6.0         23           2
 F phenylalanine       9.1         35           2
 G glycine             5.2         20           1
 H histidine           1.6          6           1
 I isoleucine          6.5         25           3
 K lysine              5.5         21           3
 L leucine            12.5         48           2
 M methionine          1.8          7           1
 N asparagine          2.6         10           1
 P proline             6.2         24           2
 Q glutamine           3.6         14           2
 R arginine            3.9         15           2
 S serine              6.0         23           2
 T threonine           4.9         19           2
 V valine              6.8         26           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 18 
KCNK10                0.067   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.067   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.067   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK3                 0.064   potassium channel, subfamily K, member 3 
KCNK9                 0.062   potassium channel, subfamily K, member 9 
KCNK15                0.055   potassium family, subfamily K, member 15 
KCNK2                 0.055   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.055   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.055   potassium channel, subfamily K, member 2 isoform a [...
KCNK16                0.050   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.050   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.050   potassium channel, subfamily K, member 16 isoform 1...
KCNK16                0.050   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK1                 0.046   potassium channel, subfamily K, member 1 
KCNK4                 0.043   TRAAK 
KCNK6                 0.043   potassium channel, subfamily K, member 6 
KCNK5                 0.035   potassium channel, subfamily K, member 5 
KCNK17                0.032   potassium channel, subfamily K, member 17 isoform 2...
KCNK17                0.032   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK7                 0.029   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.029   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.029   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.029   potassium channel, subfamily K, member 7 isoform B [...
KCNK13                0.028   potassium channel, subfamily K, member 13 
KCNK12                0.020   potassium channel, subfamily K, member 12 
KCNV2                 0.017   potassium channel, subfamily V, member 2 
KCNC4                 0.016   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.016   Shaw-related voltage-gated potassium channel protein...
KCNT2                 0.016   potassium channel, subfamily T, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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