Guide to the Human Genome
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Name: KCNK7 Sequence: fasta or formatted (257aa) NCBI GI: 5031821
Description:

potassium channel, subfamily K, member 7 isoform C

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [307aa] potassium channel, subfamily K, member 7 isoform A
alt prot [252aa] potassium channel, subfamily K, member 7 isoform B
alt prot [252aa] potassium channel, subfamily K, member 7 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.4         37           2
 C cysteine            2.7          7           1
 D aspartate           1.6          4           1
 E glutamate           3.1          8           2
 F phenylalanine       2.7          7           1
 G glycine            10.9         28           2
 H histidine           3.5          9           1
 I isoleucine          1.2          3           1
 K lysine              1.2          3           1
 L leucine            21.0         54           2
 M methionine          1.2          3           1
 N asparagine          0.4          1           1
 P proline             5.8         15           2
 Q glutamine           3.1          8           1
 R arginine            5.4         14           1
 S serine              7.8         20           2
 T threonine           3.9         10           3
 V valine              6.2         16           2
 W tryptophan          1.9          5           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 7 isoform C [H... 
KCNK7                 0.930   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.930   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.928   potassium channel, subfamily K, member 7 isoform A [...
KCNK1                 0.301   potassium channel, subfamily K, member 1 
KCNK6                 0.219   potassium channel, subfamily K, member 6 
KCNK2                 0.174   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.174   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.174   potassium channel, subfamily K, member 2 isoform a [...
KCNK10                0.174   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.174   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.174   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK16                0.168   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.168   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK16                0.164   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.164   potassium channel, subfamily K, member 16 isoform 1...
KCNK17                0.141   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK17                0.137   potassium channel, subfamily K, member 17 isoform 2...
KCNK4                 0.135   TRAAK 
KCNK15                0.127   potassium family, subfamily K, member 15 
KCNK3                 0.121   potassium channel, subfamily K, member 3 
KCNK5                 0.115   potassium channel, subfamily K, member 5 
KCNK9                 0.102   potassium channel, subfamily K, member 9 
KCNK12                0.090   potassium channel, subfamily K, member 12 
KCNK13                0.059   potassium channel, subfamily K, member 13 
KCNK18                0.045   potassium channel, subfamily K, member 18 
PPOX                  0.023   protoporphyrinogen oxidase 
PPOX                  0.023   protoporphyrinogen oxidase 
KCNA10                0.018   potassium voltage-gated channel, shaker-related subfa...
KCNA7                 0.016   potassium voltage-gated channel, shaker-related subf...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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