Guide to the Human Genome
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Name: KCNK5 Sequence: fasta or formatted (499aa) NCBI GI: 4504851
Description:

potassium channel, subfamily K, member 5

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         37           2
 C cysteine            1.0          5           1
 D aspartate           2.8         14           1
 E glutamate           7.6         38           2
 F phenylalanine       5.6         28           2
 G glycine             8.4         42           3
 H histidine           1.6          8           1
 I isoleucine          5.2         26           2
 K lysine              6.2         31           2
 L leucine             9.0         45           2
 M methionine          1.6          8           1
 N asparagine          4.2         21           2
 P proline             6.0         30           2
 Q glutamine           3.2         16           2
 R arginine            3.6         18           5
 S serine              8.2         41           3
 T threonine           5.6         28           2
 V valine              7.2         36           2
 W tryptophan          2.0         10           1
 Y tyrosine            3.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 5 
KCNK16                0.171   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.171   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK10                0.155   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.155   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.155   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK17                0.155   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK16                0.140   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.139   potassium channel, subfamily K, member 16 isoform 1...
KCNK2                 0.139   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.139   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.139   potassium channel, subfamily K, member 2 isoform a [...
KCNK4                 0.139   TRAAK 
KCNK17                0.118   potassium channel, subfamily K, member 17 isoform 2...
KCNK1                 0.110   potassium channel, subfamily K, member 1 
KCNK6                 0.103   potassium channel, subfamily K, member 6 
KCNK3                 0.096   potassium channel, subfamily K, member 3 
KCNK15                0.094   potassium family, subfamily K, member 15 
KCNK9                 0.092   potassium channel, subfamily K, member 9 
KCNK13                0.072   potassium channel, subfamily K, member 13 
KCNK12                0.068   potassium channel, subfamily K, member 12 
KCNK7                 0.057   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.057   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.057   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.057   potassium channel, subfamily K, member 7 isoform B [...
KCNK18                0.027   potassium channel, subfamily K, member 18 
KCNMA1                0.020   large conductance calcium-activated potassium chann...
KCNMA1                0.020   large conductance calcium-activated potassium chann...
KCNMA1                0.020   large conductance calcium-activated potassium channe...
KCNMA1                0.020   large conductance calcium-activated potassium channe...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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