Guide to the Human Genome
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Name: KCNK9 Sequence: fasta or formatted (374aa) NCBI GI: 7706135
Description:

potassium channel, subfamily K, member 9

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         27           3
 C cysteine            2.9         11           2
 D aspartate           3.2         12           1
 E glutamate           5.9         22           3
 F phenylalanine       6.4         24           2
 G glycine             6.1         23           2
 H histidine           2.4          9           1
 I isoleucine          5.9         22           1
 K lysine              5.1         19           2
 L leucine             8.8         33           2
 M methionine          3.5         13           1
 N asparagine          2.9         11           1
 P proline             4.0         15           1
 Q glutamine           3.2         12           1
 R arginine            6.1         23           2
 S serine              8.8         33           2
 T threonine           5.6         21           2
 V valine              6.4         24           2
 W tryptophan          0.5          2           1
 Y tyrosine            4.8         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 9 
KCNK3                 0.552   potassium channel, subfamily K, member 3 
KCNK15                0.430   potassium family, subfamily K, member 15 
KCNK16                0.145   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.145   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK13                0.142   potassium channel, subfamily K, member 13 
KCNK16                0.138   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.138   potassium channel, subfamily K, member 16 isoform 1...
KCNK2                 0.137   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.137   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.137   potassium channel, subfamily K, member 2 isoform a [...
KCNK10                0.136   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.136   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.136   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK4                 0.130   TRAAK 
KCNK1                 0.126   potassium channel, subfamily K, member 1 
KCNK5                 0.125   potassium channel, subfamily K, member 5 
KCNK6                 0.114   potassium channel, subfamily K, member 6 
KCNK17                0.110   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK12                0.105   potassium channel, subfamily K, member 12 
KCNK17                0.104   potassium channel, subfamily K, member 17 isoform 2...
KCNK7                 0.068   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.068   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.068   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.068   potassium channel, subfamily K, member 7 isoform B [...
KCNK18                0.064   potassium channel, subfamily K, member 18 
KCNH5                 0.019   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.019   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.019   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.018   potassium voltage-gated channel, subfamily H, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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