Guide to the Human Genome
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Name: KCNK6 Sequence: fasta or formatted (313aa) NCBI GI: 4758624
Description:

potassium channel, subfamily K, member 6

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.7         46           2
 C cysteine            1.6          5           1
 D aspartate           4.2         13           2
 E glutamate           3.5         11           2
 F phenylalanine       4.8         15           2
 G glycine             6.4         20           1
 H histidine           2.6          8           1
 I isoleucine          2.6          8           1
 K lysine              0.6          2           1
 L leucine            16.9         53           3
 M methionine          1.3          4           1
 N asparagine          1.0          3           1
 P proline             6.1         19           3
 Q glutamine           2.6          8           2
 R arginine            5.8         18           2
 S serine              6.7         21           2
 T threonine           5.4         17           2
 V valine              8.3         26           3
 W tryptophan          1.9          6           1
 Y tyrosine            3.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 6 
KCNK1                 0.378   potassium channel, subfamily K, member 1 
KCNK16                0.217   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.217   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK4                 0.210   TRAAK 
KCNK7                 0.205   potassium channel, subfamily K, member 7 isoform A [...
KCNK17                0.187   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK16                0.185   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.183   potassium channel, subfamily K, member 16 isoform 1...
KCNK2                 0.183   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.183   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.183   potassium channel, subfamily K, member 2 isoform a [...
KCNK7                 0.180   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.180   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.180   potassium channel, subfamily K, member 7 isoform B [...
KCNK10                0.175   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.175   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.175   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK5                 0.171   potassium channel, subfamily K, member 5 
KCNK17                0.155   potassium channel, subfamily K, member 17 isoform 2...
KCNK12                0.151   potassium channel, subfamily K, member 12 
KCNK9                 0.139   potassium channel, subfamily K, member 9 
KCNK3                 0.136   potassium channel, subfamily K, member 3 
KCNK15                0.131   potassium family, subfamily K, member 15 
KCNK13                0.118   potassium channel, subfamily K, member 13 
KCNK18                0.055   potassium channel, subfamily K, member 18 
KCNQ5                 0.030   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.030   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.030   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.030   potassium voltage-gated channel, KQT-like subfamily...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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