Guide to the Human Genome
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Name: KCNK10 Sequence: fasta or formatted (543aa) NCBI GI: 20143944
Description:

potassium channel, subfamily K, member 10 isoform 2

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [538aa] potassium channel, subfamily K, member 10 isoform 1
alt prot [543aa] potassium channel, subfamily K, member 10 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         44           3
 C cysteine            1.1          6           1
 D aspartate           3.9         21           1
 E glutamate           6.8         37           3
 F phenylalanine       5.0         27           3
 G glycine             6.8         37           2
 H histidine           1.5          8           1
 I isoleucine          6.8         37           2
 K lysine              7.0         38           2
 L leucine             8.1         44           2
 M methionine          1.7          9           1
 N asparagine          4.8         26           2
 P proline             4.6         25           2
 Q glutamine           3.7         20           2
 R arginine            5.5         30           3
 S serine              6.8         37           2
 T threonine           6.8         37           2
 V valine              7.6         41           5
 W tryptophan          1.7          9           1
 Y tyrosine            1.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 10 isoform 2 ... 
KCNK10                0.964   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.964   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK2                 0.429   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.429   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.429   potassium channel, subfamily K, member 2 isoform a [...
KCNK4                 0.275   TRAAK 
KCNK16                0.165   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.165   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK16                0.146   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.146   potassium channel, subfamily K, member 16 isoform 1...
KCNK5                 0.145   potassium channel, subfamily K, member 5 
KCNK17                0.121   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK1                 0.119   potassium channel, subfamily K, member 1 
KCNK3                 0.099   potassium channel, subfamily K, member 3 
KCNK6                 0.098   potassium channel, subfamily K, member 6 
KCNK9                 0.094   potassium channel, subfamily K, member 9 
KCNK17                0.094   potassium channel, subfamily K, member 17 isoform 2...
KCNK15                0.092   potassium family, subfamily K, member 15 
KCNK7                 0.082   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.080   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.080   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.080   potassium channel, subfamily K, member 7 isoform B [...
KCNK13                0.079   potassium channel, subfamily K, member 13 
KCNK12                0.075   potassium channel, subfamily K, member 12 
KCNK18                0.048   potassium channel, subfamily K, member 18 
KCNH1                 0.016   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.016   potassium voltage-gated channel, subfamily H, member...
KCND1                 0.016   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.015   potassium voltage-gated channel, Shal-related subfam...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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