Guide to the Human Genome
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Name: CXorf64 Sequence: fasta or formatted (298aa) NCBI GI: 170016023
Description:

hypothetical protein LOC100130613

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         20           1
 C cysteine            2.3          7           1
 D aspartate           2.7          8           2
 E glutamate           4.7         14           2
 F phenylalanine       3.4         10           2
 G glycine             9.1         27           2
 H histidine           5.0         15           2
 I isoleucine          3.7         11           1
 K lysine              2.0          6           1
 L leucine             8.1         24           1
 M methionine          2.0          6           1
 N asparagine          4.7         14           2
 P proline            16.1         48           3
 Q glutamine           3.0          9           1
 R arginine            5.4         16           1
 S serine              9.1         27           3
 T threonine           3.4         10           1
 V valine              6.4         19           2
 W tryptophan          1.7          5           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC100130613 
FLJ22184              0.033   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
WASF2                 0.024   WAS protein family, member 2 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
WBP11                 0.024   WW domain binding protein 11 
RXRB                  0.024   retinoid X receptor, beta 
ZNF831                0.023   zinc finger protein 831 
LOC440829             0.023   PREDICTED: transmembrane protein 46-like 
WIPF3                 0.023   WAS/WASL interacting protein family, member 3 [Homo...
ESX1                  0.023   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
APBB1IP               0.021   amyloid beta (A4) precursor protein-binding, family ...
SIX5                  0.021   sine oculis homeobox homolog 5 
WIPF1                 0.020   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.020   WAS/WASL interacting protein family, member 1 
PCDH15                0.020   protocadherin 15 isoform CD1-4 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-10 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-9 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-8 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-7 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-6 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-2 precursor 
PCDH15                0.020   protocadherin 15 isoform CD1-1 precursor 
GLTSCR1               0.020   glioma tumor suppressor candidate region gene 1 [Ho...
ANTXR1                0.020   anthrax toxin receptor 1 isoform 1 precursor 
CCNK                  0.020   cyclin K isoform 1 
C6orf132              0.020   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.020   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.020   PREDICTED: hypothetical protein LOC647024 
PRRC1                 0.018   proline-rich coiled-coil 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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