Guide to the Human Genome
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Name: KRT83 Sequence: fasta or formatted (493aa) NCBI GI: 169790841
Description:

keratin 83

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         39           2
 C cysteine            6.3         31           2
 D aspartate           3.4         17           2
 E glutamate          10.3         51           3
 F phenylalanine       2.6         13           1
 G glycine             8.1         40           3
 H histidine           1.0          5           1
 I isoleucine          4.5         22           1
 K lysine              4.9         24           3
 L leucine             8.9         44           2
 M methionine          1.2          6           1
 N asparagine          4.7         23           1
 P proline             2.6         13           2
 Q glutamine           4.7         23           2
 R arginine            7.3         36           2
 S serine              7.9         39           3
 T threonine           4.1         20           2
 V valine              6.7         33           3
 W tryptophan          0.2          1           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 83 
KRT81                 0.940   keratin, hair, basic, 1 
LOC100293351          0.871   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.871   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.871   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.871   keratin 86 
KRT85                 0.780   keratin 85 
KRT84                 0.530   keratin, hair, basic, 4 
KRT82                 0.511   keratin 82 
KRT5                  0.415   keratin 5 
KRT6A                 0.408   keratin 6A 
KRT75                 0.406   keratin 75 
KRT6B                 0.406   keratin 6B 
KRT6C                 0.406   keratin 6C 
KRT8                  0.397   keratin 8 
KRT3                  0.391   keratin 3 
KRT7                  0.388   keratin 7 
KRT4                  0.387   keratin 4 
KRT73                 0.386   keratin 73 
KRT71                 0.385   keratin 71 
KRT76                 0.380   keratin 76 
KRT1                  0.378   keratin 1 
KRT72                 0.372   keratin 72 isoform 1 
KRT72                 0.372   keratin 72 isoform 1 
KRT79                 0.370   keratin 6L 
KRT74                 0.366   keratin 6 irs4 
KRT2                  0.362   keratin 2 
KRT77                 0.334   keratin 77 
KRT78                 0.329   keratin 5b 
KRT72                 0.315   keratin 72 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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