Guide to the Human Genome
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Name: KRT72 Sequence: fasta or formatted (511aa) NCBI GI: 28372503
Description:

keratin 72 isoform 1

Referenced in:

Keratins

Other entries for this name:
alt mRNA [511aa] keratin 72 isoform 1
alt prot [469aa] keratin 72 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         48           3
 C cysteine            2.2         11           1
 D aspartate           5.1         26           2
 E glutamate           8.4         43           2
 F phenylalanine       2.7         14           2
 G glycine             7.8         40           3
 H histidine           0.8          4           1
 I isoleucine          4.9         25           2
 K lysine              7.2         37           2
 L leucine            10.8         55           2
 M methionine          2.0         10           1
 N asparagine          3.9         20           2
 P proline             2.2         11           2
 Q glutamine           5.1         26           2
 R arginine            6.1         31           2
 S serine             10.0         51           3
 T threonine           3.7         19           1
 V valine              5.1         26           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 72 isoform 1 
KRT72                 1.000   keratin 72 isoform 1 
KRT72                 0.827   keratin 72 isoform 2 
KRT73                 0.701   keratin 73 
KRT71                 0.701   keratin 71 
KRT74                 0.681   keratin 6 irs4 
KRT6A                 0.562   keratin 6A 
KRT6C                 0.561   keratin 6C 
KRT6B                 0.561   keratin 6B 
KRT4                  0.559   keratin 4 
KRT75                 0.542   keratin 75 
KRT5                  0.541   keratin 5 
KRT3                  0.532   keratin 3 
KRT76                 0.528   keratin 76 
KRT2                  0.518   keratin 2 
KRT1                  0.517   keratin 1 
KRT79                 0.511   keratin 6L 
KRT77                 0.498   keratin 77 
KRT7                  0.457   keratin 7 
KRT8                  0.454   keratin 8 
KRT78                 0.450   keratin 5b 
KRT84                 0.421   keratin, hair, basic, 4 
KRT82                 0.396   keratin 82 
KRT85                 0.395   keratin 85 
KRT81                 0.380   keratin, hair, basic, 1 
LOC100293351          0.379   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.379   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.379   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.379   keratin 86 
KRT83                 0.375   keratin 83 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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