Guide to the Human Genome
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Name: KRT72 Sequence: fasta or formatted (469aa) NCBI GI: 226246665
Description:

keratin 72 isoform 2

Referenced in:

Keratins

Other entries for this name:
alt prot [511aa] keratin 72 isoform 1
alt prot [511aa] keratin 72 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         46           3
 C cysteine            2.3         11           1
 D aspartate           5.1         24           1
 E glutamate           8.3         39           2
 F phenylalanine       3.0         14           2
 G glycine             7.9         37           3
 H histidine           0.6          3           1
 I isoleucine          4.3         20           2
 K lysine              7.0         33           2
 L leucine            10.7         50           2
 M methionine          2.1         10           1
 N asparagine          3.8         18           2
 P proline             2.3         11           2
 Q glutamine           4.5         21           2
 R arginine            6.0         28           2
 S serine             10.4         49           3
 T threonine           3.6         17           1
 V valine              5.1         24           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 72 isoform 2 
KRT72                 0.976   keratin 72 isoform 1 
KRT72                 0.976   keratin 72 isoform 1 
KRT73                 0.672   keratin 73 
KRT71                 0.669   keratin 71 
KRT74                 0.651   keratin 6 irs4 
KRT6A                 0.521   keratin 6A 
KRT4                  0.520   keratin 4 
KRT6B                 0.520   keratin 6B 
KRT6C                 0.519   keratin 6C 
KRT75                 0.499   keratin 75 
KRT5                  0.499   keratin 5 
KRT3                  0.493   keratin 3 
KRT76                 0.486   keratin 76 
KRT79                 0.480   keratin 6L 
KRT2                  0.480   keratin 2 
KRT1                  0.475   keratin 1 
KRT77                 0.453   keratin 77 
KRT78                 0.419   keratin 5b 
KRT8                  0.419   keratin 8 
KRT7                  0.418   keratin 7 
KRT84                 0.386   keratin, hair, basic, 4 
KRT85                 0.365   keratin 85 
KRT82                 0.361   keratin 82 
KRT81                 0.351   keratin, hair, basic, 1 
LOC100293351          0.349   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.349   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.349   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.349   keratin 86 
KRT83                 0.345   keratin 83 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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