Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRT79 Sequence: fasta or formatted (535aa) NCBI GI: 32567786
Description:

keratin 6L

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         41           2
 C cysteine            0.9          5           1
 D aspartate           4.3         23           1
 E glutamate           7.3         39           2
 F phenylalanine       3.0         16           1
 G glycine            11.0         59           3
 H histidine           1.5          8           1
 I isoleucine          3.4         18           2
 K lysine              5.4         29           2
 L leucine             9.7         52           2
 M methionine          1.7          9           1
 N asparagine          4.3         23           2
 P proline             1.7          9           2
 Q glutamine           6.7         36           2
 R arginine            6.0         32           1
 S serine              9.3         50           2
 T threonine           6.9         37           3
 V valine              6.4         34           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 6L 
KRT6B                 0.592   keratin 6B 
KRT6A                 0.591   keratin 6A 
KRT6C                 0.588   keratin 6C 
KRT5                  0.574   keratin 5 
KRT75                 0.564   keratin 75 
KRT3                  0.550   keratin 3 
KRT1                  0.547   keratin 1 
KRT4                  0.544   keratin 4 
KRT77                 0.530   keratin 77 
KRT76                 0.527   keratin 76 
KRT2                  0.520   keratin 2 
KRT73                 0.503   keratin 73 
KRT71                 0.500   keratin 71 
KRT72                 0.483   keratin 72 isoform 1 
KRT72                 0.483   keratin 72 isoform 1 
KRT74                 0.479   keratin 6 irs4 
KRT7                  0.445   keratin 7 
KRT78                 0.430   keratin 5b 
KRT8                  0.426   keratin 8 
KRT84                 0.425   keratin, hair, basic, 4 
KRT72                 0.418   keratin 72 isoform 2 
KRT82                 0.377   keratin 82 
KRT85                 0.375   keratin 85 
LOC100293351          0.357   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.357   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.357   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.357   keratin 86 
KRT81                 0.356   keratin, hair, basic, 1 
KRT83                 0.353   keratin 83 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press