CDX2 9355

Name: CDX2	Sequence: fasta or formatted (313aa)		NCBI GI: 169636435
Description: caudal type homeobox 2		Referenced in: Homeobox and Related Proteins Stem Cells and Early Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.8 40 8 C cysteine 0.6 2 1 D aspartate 2.6 8 1 E glutamate 3.2 10 1 F phenylalanine 1.0 3 1 G glycine 8.3 26 2 H histidine 4.5 14 3 I isoleucine 1.3 4 1 K lysine 4.2 13 3 L leucine 7.7 24 2 M methionine 1.3 4 1 N asparagine 3.5 11 1 P proline 13.7 43 6 Q glutamine 8.0 25 7 R arginine 5.1 16 2 S serine 8.0 25 2 T threonine 3.2 10 1 V valine 5.4 17 2 W tryptophan 1.3 4 1 Y tyrosine 4.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 caudal type homeobox 2 CDX1 0.302 caudal type homeobox 1 CDX4 0.211 caudal type homeobox 4 HOXA4 0.119 homeobox A4 HOXB1 0.114 homeobox B1 HOXA3 0.114 homeobox A3 isoform a HOXA3 0.114 homeobox A3 isoform a HOXC4 0.113 homeobox C4 HOXC4 0.113 homeobox C4 HOXB5 0.110 homeobox B5 HOXD3 0.110 homeobox D3 HOXB7 0.106 homeobox B7 HOXD4 0.103 homeobox D4 HOXA9 0.102 homeobox A9 HOXB6 0.098 homeobox B6 HOXA1 0.098 homeobox A1 isoform a HOXB4 0.097 homeobox B4 NKX2-4 0.097 NK2 homeobox 4 NKX1-1 0.095 PREDICTED: NK1 homeobox 1 HOXA5 0.094 homeobox A5 GSX2 0.092 GS homeobox 2 HOXD9 0.090 homeobox D9 NKX1-1 0.090 PREDICTED: HPX-153 homeobox HOXC5 0.090 homeobox C5 HOXC9 0.090 homeobox C9 HOXA3 0.089 homeobox A3 isoform b HOXA6 0.089 homeobox A6 HOXD8 0.089 homeobox D8 NKX1-1 0.089 PREDICTED: NK1 homeobox 1 MNX1 0.089 homeo box HB9 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.