HOXC9 23927

Name: HOXC9	Sequence: fasta or formatted (260aa)		NCBI GI: 24497547
Description: homeobox C9		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 24 3 C cysteine 1.5 4 1 D aspartate 5.8 15 1 E glutamate 5.4 14 2 F phenylalanine 3.5 9 1 G glycine 5.8 15 2 H histidine 2.7 7 1 I isoleucine 1.5 4 1 K lysine 6.2 16 2 L leucine 6.9 18 2 M methionine 2.7 7 1 N asparagine 3.1 8 1 P proline 10.4 27 1 Q glutamine 2.7 7 1 R arginine 7.7 20 2 S serine 9.2 24 2 T threonine 4.6 12 1 V valine 4.2 11 2 W tryptophan 1.5 4 1 Y tyrosine 5.4 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox C9 HOXD9 0.435 homeobox D9 HOXA9 0.410 homeobox A9 HOXB9 0.387 homeobox B9 HOXC10 0.215 homeobox C10 HOXA10 0.213 homeobox A10 isoform a HOXD10 0.209 homeobox D10 HOXA10 0.190 homeobox A10 isoform b HOXA11 0.151 homeobox A11 HOXA6 0.144 homeobox A6 HOXC11 0.144 homeobox C11 HOXD11 0.142 homeobox D11 HOXC5 0.138 homeobox C5 HOXB7 0.132 homeobox B7 HOXB6 0.132 homeobox B6 HOXA5 0.132 homeobox A5 HOXC8 0.132 homeobox C8 HOXB8 0.128 homeobox B8 HOXD8 0.126 homeobox D8 HOXD4 0.126 homeobox D4 HOXA7 0.125 homeobox A7 HOXB5 0.123 homeobox B5 HOXC4 0.123 homeobox C4 HOXC4 0.123 homeobox C4 HOXB13 0.121 homeobox B13 MEOX2 0.119 mesenchyme homeobox 2 HOXA4 0.115 homeobox A4 HOXA2 0.113 homeobox A2 HOXC6 0.113 homeobox C6 isoform 2 HOXC6 0.113 homeobox C6 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.