CDX4 31153

Name: CDX4	Sequence: fasta or formatted (284aa)		NCBI GI: 4885127
Description: caudal type homeobox 4		Referenced in: Homeobox and Related Proteins Stem Cells and Early Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 18 3 C cysteine 1.1 3 1 D aspartate 3.2 9 1 E glutamate 4.9 14 1 F phenylalanine 3.2 9 2 G glycine 11.6 33 4 H histidine 2.1 6 1 I isoleucine 3.2 9 1 K lysine 4.9 14 3 L leucine 4.6 13 2 M methionine 3.5 10 1 N asparagine 2.8 8 1 P proline 8.8 25 2 Q glutamine 3.9 11 2 R arginine 4.9 14 2 S serine 12.7 36 2 T threonine 6.7 19 2 V valine 6.0 17 2 W tryptophan 1.8 5 1 Y tyrosine 3.9 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 caudal type homeobox 4 CDX1 0.270 caudal type homeobox 1 CDX2 0.236 caudal type homeobox 2 HOXA5 0.128 homeobox A5 HOXD4 0.108 homeobox D4 HOXD9 0.106 homeobox D9 HOXB5 0.105 homeobox B5 HOXA4 0.103 homeobox A4 HOXA2 0.101 homeobox A2 HOXB7 0.101 homeobox B7 HOXC4 0.101 homeobox C4 HOXC4 0.101 homeobox C4 MEOX1 0.098 mesenchyme homeobox 1 isoform 1 HOXC5 0.096 homeobox C5 HOXC10 0.096 homeobox C10 HOXA7 0.096 homeobox A7 HOXA9 0.094 homeobox A9 HOXB4 0.094 homeobox B4 HOXC6 0.092 homeobox C6 isoform 2 HOXC6 0.092 homeobox C6 isoform 1 HOXD11 0.090 homeobox D11 HOXA3 0.090 homeobox A3 isoform a HOXA3 0.090 homeobox A3 isoform a HOXA6 0.089 homeobox A6 HOXA10 0.089 homeobox A10 isoform a PDX1 0.087 pancreatic and duodenal homeobox 1 HOXA11 0.087 homeobox A11 GBX2 0.087 gastrulation brain homeo box 2 HOXB9 0.087 homeobox B9 HOXB3 0.087 homeobox B3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.