NKX1-1 19563

Name: NKX1-1	Sequence: fasta or formatted (653aa)		NCBI GI: 239748344
Description: PREDICTED: NK1 homeobox 1		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [411aa] PREDICTED: HPX-153 homeobox alt prot [814aa] PREDICTED: NK1 homeobox 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 71 3 C cysteine 2.6 17 2 D aspartate 1.7 11 1 E glutamate 2.8 18 1 F phenylalanine 1.7 11 1 G glycine 10.0 65 5 H histidine 3.1 20 2 I isoleucine 0.9 6 1 K lysine 3.2 21 2 L leucine 9.8 64 3 M methionine 0.8 5 1 N asparagine 1.7 11 1 P proline 16.1 105 2 Q glutamine 3.7 24 1 R arginine 6.4 42 2 S serine 10.7 70 3 T threonine 5.2 34 2 V valine 4.1 27 1 W tryptophan 2.1 14 2 X unknown 1.1 7 7 Y tyrosine 1.5 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: NK1 homeobox 1 NKX1-1 0.297 PREDICTED: NK1 homeobox 1 NKX1-1 0.295 PREDICTED: HPX-153 homeobox NKX1-2 0.112 NK1 homeobox 2 NKX1-2 0.112 PREDICTED: NK1 homeobox 2 NKX1-2 0.112 PREDICTED: NK1 homeobox 2 NKX1-2 0.112 PREDICTED: NK1 homeobox 2 HOXA3 0.058 homeobox A3 isoform a HOXA3 0.058 homeobox A3 isoform a HMX1 0.054 homeo box (H6 family) 1 MNX1 0.053 homeo box HB9 HOXB4 0.052 homeobox B4 ARX 0.052 aristaless related homeobox GSX1 0.052 GS homeobox 1 MEOX2 0.049 mesenchyme homeobox 2 RAX 0.049 retina and anterior neural fold homeobox HOXB3 0.048 homeobox B3 HOXD3 0.048 homeobox D3 HOXA4 0.048 homeobox A4 BARHL1 0.048 BarH-like homeobox 1 DLX2 0.047 distal-less homeobox 2 HMX3 0.046 H6 family homeobox 3 BARX2 0.046 BarH-like homeobox 2 NKX2-6 0.046 NK2 transcription factor related, locus 6 GBX2 0.045 gastrulation brain homeo box 2 VENTX 0.045 VENT homeobox HOXC4 0.043 homeobox C4 HOXC4 0.043 homeobox C4 PHOX2B 0.043 paired-like homeobox 2b HOXA3 0.043 homeobox A3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.