HOXB4 3119

Name: HOXB4	Sequence: fasta or formatted (251aa)		NCBI GI: 13273315
Description: homeobox B4		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 22 2 C cysteine 2.8 7 1 D aspartate 2.0 5 1 E glutamate 5.2 13 2 F phenylalanine 2.4 6 1 G glycine 7.6 19 2 H histidine 2.8 7 1 I isoleucine 2.0 5 1 K lysine 4.4 11 2 L leucine 5.2 13 2 M methionine 1.6 4 1 N asparagine 3.6 9 1 P proline 18.3 46 15 Q glutamine 4.0 10 2 R arginine 9.2 23 4 S serine 8.4 21 3 T threonine 2.4 6 1 V valine 4.0 10 2 W tryptophan 1.2 3 1 Y tyrosine 4.4 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox B4 HOXC4 0.490 homeobox C4 HOXC4 0.490 homeobox C4 HOXA4 0.450 homeobox A4 HOXD4 0.435 homeobox D4 HOXA5 0.258 homeobox A5 HOXB5 0.233 homeobox B5 HOXA3 0.227 homeobox A3 isoform a HOXA3 0.227 homeobox A3 isoform a HOXC5 0.210 homeobox C5 HOXB6 0.210 homeobox B6 HOXD8 0.192 homeobox D8 PDX1 0.190 pancreatic and duodenal homeobox 1 HOXA7 0.187 homeobox A7 HOXA6 0.187 homeobox A6 HOXD3 0.185 homeobox D3 HOXC6 0.183 homeobox C6 isoform 2 HOXC6 0.183 homeobox C6 isoform 1 HOXB7 0.183 homeobox B7 HOXB3 0.173 homeobox B3 HOXB2 0.165 homeobox B2 CDX1 0.156 caudal type homeobox 1 HOXB8 0.144 homeobox B8 HOXA3 0.144 homeobox A3 isoform b GSX1 0.144 GS homeobox 1 GBX1 0.138 gastrulation brain homeo box 1 HOXA2 0.138 homeobox A2 HOXC8 0.137 homeobox C8 NKX1-1 0.135 PREDICTED: NK1 homeobox 1 HOXB1 0.133 homeobox B1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.