HOXC4 23924

Name: HOXC4	Sequence: fasta or formatted (264aa)		NCBI GI: 24497538
Description: homeobox C4		Referenced in: HOX Genes
Other entries for this name: alt mRNA [264aa] homeobox C4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 20 2 C cysteine 1.9 5 1 D aspartate 2.3 6 1 E glutamate 6.8 18 2 F phenylalanine 1.5 4 1 G glycine 4.5 12 2 H histidine 5.3 14 3 I isoleucine 3.8 10 1 K lysine 4.5 12 2 L leucine 4.9 13 1 M methionine 1.9 5 1 N asparagine 3.4 9 1 P proline 13.3 35 5 Q glutamine 6.1 16 2 R arginine 7.6 20 4 S serine 11.7 31 2 T threonine 4.5 12 1 V valine 1.9 5 1 W tryptophan 1.1 3 1 Y tyrosine 5.3 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox C4 HOXC4 1.000 homeobox C4 HOXB4 0.474 homeobox B4 HOXD4 0.439 homeobox D4 HOXA4 0.374 homeobox A4 LOC100294456 0.264 PREDICTED: similar to Homeobox protein Hox-C4 [Homo... HOXA5 0.242 homeobox A5 HOXB5 0.236 homeobox B5 HOXC5 0.206 homeobox C5 HOXB6 0.199 homeobox B6 HOXA7 0.193 homeobox A7 HOXB7 0.188 homeobox B7 HOXA6 0.180 homeobox A6 HOXA3 0.169 homeobox A3 isoform a HOXA3 0.169 homeobox A3 isoform a HOXC6 0.167 homeobox C6 isoform 2 HOXC6 0.167 homeobox C6 isoform 1 HOXD3 0.162 homeobox D3 HOXB8 0.158 homeobox B8 CDX1 0.156 caudal type homeobox 1 HOXB2 0.156 homeobox B2 HOXB3 0.154 homeobox B3 PDX1 0.151 pancreatic and duodenal homeobox 1 HOXD8 0.143 homeobox D8 HOXA1 0.138 homeobox A1 isoform a HOXB1 0.136 homeobox B1 HOXA2 0.132 homeobox A2 CDX2 0.132 caudal type homeobox 2 HOXC8 0.132 homeobox C8 GSX2 0.130 GS homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.