NKX1-1 17160

Name: NKX1-1	Sequence: fasta or formatted (411aa)		NCBI GI: 239742243
Description: PREDICTED: HPX-153 homeobox		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [653aa] PREDICTED: NK1 homeobox 1 alt prot [814aa] PREDICTED: NK1 homeobox 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.5 72 3 C cysteine 1.7 7 1 D aspartate 4.4 18 3 E glutamate 5.6 23 2 F phenylalanine 2.4 10 1 G glycine 15.1 62 5 H histidine 1.0 4 1 I isoleucine 0.5 2 1 K lysine 3.2 13 2 L leucine 6.8 28 2 M methionine 0.7 3 1 N asparagine 2.4 10 1 P proline 12.9 53 2 Q glutamine 2.2 9 1 R arginine 6.1 25 4 S serine 6.8 28 2 T threonine 5.4 22 2 V valine 3.4 14 1 W tryptophan 0.5 2 1 Y tyrosine 1.5 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: HPX-153 homeobox NKX1-1 0.946 PREDICTED: NK1 homeobox 1 NKX1-1 0.481 PREDICTED: NK1 homeobox 1 NKX1-2 0.200 PREDICTED: NK1 homeobox 2 NKX1-2 0.200 PREDICTED: NK1 homeobox 2 NKX1-2 0.200 PREDICTED: NK1 homeobox 2 NKX1-2 0.194 NK1 homeobox 2 HMX1 0.115 homeo box (H6 family) 1 MNX1 0.104 homeo box HB9 ARX 0.092 aristaless related homeobox NKX3-2 0.092 NK3 homeobox 2 DLX2 0.087 distal-less homeobox 2 HOXD3 0.085 homeobox D3 HOXA3 0.084 homeobox A3 isoform a HOXA3 0.084 homeobox A3 isoform a RAX 0.082 retina and anterior neural fold homeobox NKX2-4 0.082 NK2 homeobox 4 EN1 0.079 engrailed homeobox 1 HMX3 0.079 H6 family homeobox 3 MEOX2 0.078 mesenchyme homeobox 2 BARHL1 0.078 BarH-like homeobox 1 GBX1 0.078 gastrulation brain homeo box 1 HOXB3 0.078 homeobox B3 GSX1 0.077 GS homeobox 1 EVX1 0.076 even-skipped homeobox 1 EN2 0.076 engrailed homeobox 2 BARX2 0.074 BarH-like homeobox 2 NKX6-1 0.074 NK6 transcription factor related, locus 1 VENTX 0.074 VENT homeobox NKX2-6 0.073 NK2 transcription factor related, locus 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.