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Search of human proteins with 169218287
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169218287 PREDICTED: similar to belphegor [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169218287 PREDICTED: similar to belphegor [Homo sapiens] 590 e-169
gi|75677353 AAA-ATPase TOB3 [Homo sapiens] 506 e-143
gi|42476028 ATPase family, AAA domain containing 3A [Homo sapiens] 302 2e-82
gi|194018490 ATPase family, AAA domain containing 3C [Homo sapiens] 286 1e-77
gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens] 48 9e-06
gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens] 47 1e-05
gi|226371754 katanin p60 subunit A-like 2 [Homo sapiens] 46 3e-05
gi|7019569 vacuolar protein sorting factor 4A [Homo sapiens] 46 3e-05
gi|17865802 vacuolar protein sorting factor 4B [Homo sapiens] 46 4e-05
gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens] 44 2e-04
gi|40806170 spastin isoform 2 [Homo sapiens] 42 8e-04
gi|11875211 spastin isoform 1 [Homo sapiens] 42 8e-04
gi|5901990 katanin p60 subunit A 1 [Homo sapiens] 41 0.001
gi|21327685 YME1-like 1 isoform 1 [Homo sapiens] 39 0.004
gi|7657689 YME1-like 1 isoform 3 [Homo sapiens] 39 0.004
gi|21361144 proteasome 26S ATPase subunit 3 [Homo sapiens] 39 0.005
gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens] 37 0.020
gi|31742536 fidgetin-like 1 [Homo sapiens] 35 0.098
gi|112789543 fidgetin-like 1 [Homo sapiens] 35 0.098
gi|24430151 proteasome 26S ATPase subunit 1 [Homo sapiens] 34 0.13
gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens] 33 0.22
gi|4504073 glycoprotein Ib, beta polypeptide precursor [Homo sap... 33 0.28
gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens] 33 0.37
gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens] 32 0.48
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 32 0.63
gi|226437602 NK1 homeobox 2 [Homo sapiens] 30 2.4
gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens] 30 2.4
gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens] 30 2.4
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 29 4.1
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 29 4.1
>gi|169218287 PREDICTED: similar to belphegor [Homo sapiens]
Length = 284
Score = 590 bits (1522), Expect = e-169
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MGQSLTPWGSACLACSCRGRTLLWAAPGVTLALLGLSLVHSLLLFMDEADAFLRKRATEE 60
MGQSLTPWGSACLACSCRGRTLLWAAPGVTLALLGLSLVHSLLLFMDEADAFLRKRATEE
Sbjct: 1 MGQSLTPWGSACLACSCRGRTLLWAAPGVTLALLGLSLVHSLLLFMDEADAFLRKRATEE 60
Query: 61 ISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERL 120
ISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERL
Sbjct: 61 ISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERL 120
Query: 121 VRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYAS 180
VRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYAS
Sbjct: 121 VRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYAS 180
Query: 181 KDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSY 240
KDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSY
Sbjct: 181 KDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSY 240
Query: 241 PCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL 284
PCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
Sbjct: 241 PCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL 284
>gi|75677353 AAA-ATPase TOB3 [Homo sapiens]
Length = 648
Score = 506 bits (1302), Expect = e-143
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 42 LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINS 101
LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINS
Sbjct: 406 LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINS 465
Query: 102 RIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGM 161
RIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGM
Sbjct: 466 RIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGM 525
Query: 162 SGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPL 221
SGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPL
Sbjct: 526 SGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPL 585
Query: 222 SGVQGETLTSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGH 281
SGVQGETLTSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGH
Sbjct: 586 SGVQGETLTSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGH 645
Query: 282 PLL 284
PLL
Sbjct: 646 PLL 648
>gi|42476028 ATPase family, AAA domain containing 3A [Homo sapiens]
Length = 634
Score = 302 bits (774), Expect = 2e-82
Identities = 154/177 (87%), Positives = 164/177 (92%)
Query: 42 LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINS 101
LLLF+DEADAFLRKRATE+IS+DLRATLNAFLY GQHSNKFMLVLASN PEQFD AIN
Sbjct: 454 LLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAIND 513
Query: 102 RIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGM 161
RI+ MVHFDLP QEERERLVR++FD VLKPATEGK+RLKLAQFDYGRKCSEVARLTEGM
Sbjct: 514 RINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARLTEGM 573
Query: 162 SGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVE 218
SGREIAQLAVSWQATAYAS+DGVLTEAMMD VQDAVQQ++QKM WLKAEGPGRG E
Sbjct: 574 SGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPGRGDE 630
>gi|194018490 ATPase family, AAA domain containing 3C [Homo sapiens]
Length = 411
Score = 286 bits (732), Expect = 1e-77
Identities = 147/181 (81%), Positives = 159/181 (87%)
Query: 42 LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINS 101
LLLF+DEADAFLRKRATE+IS+DLRATLNAFLY GQHSNKFML+LAS PEQFD AIN+
Sbjct: 231 LLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLILASCHPEQFDWAINA 290
Query: 102 RIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGM 161
IDVMVHFDLP QEER RLVR++ + VLKPATEGKRRLKLAQFDYGRKC E+ARLTEGM
Sbjct: 291 CIDVMVHFDLPGQEERARLVRMYLNEYVLKPATEGKRRLKLAQFDYGRKCLEIARLTEGM 350
Query: 162 SGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPL 221
S R+IAQLAVSWQATAYASKDGVLTEAMMDACVQD VQQ++Q MRWLK E PG E P
Sbjct: 351 SCRKIAQLAVSWQATAYASKDGVLTEAMMDACVQDFVQQHQQMMRWLKGERPGPEDEQPS 410
Query: 222 S 222
S
Sbjct: 411 S 411
>gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens]
Length = 403
Score = 48.1 bits (113), Expect = 9e-06
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 43 LLFMDEADAFLRKRATEEISKD--LRATLNAFLYHMGQHS--NKFMLVLASNLPEQFDCA 98
++FMDE DA +R +E S D ++ TL L M ++ +++A+N P+ D A
Sbjct: 243 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPA 302
Query: 99 I--NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVAR 156
+ R+D +H DLP ++ R ++++H P T K + DY + +
Sbjct: 303 LLRPGRLDRKIHIDLPNEQARLDILKIH-----AGPIT------KHGEIDY----EAIVK 347
Query: 157 LTEGMSGREIAQLAVSWQATAY-ASKDGVLTEAMMDA 192
L++G +G ++ + A A D V+ E M A
Sbjct: 348 LSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKA 384
>gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]
Length = 361
Score = 47.4 bits (111), Expect = 1e-05
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 24 WAAPGVTLALLGLSLVHSL---LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMG--- 77
W LA SL L ++F+DE D+FLR R+ S D AT M
Sbjct: 166 WYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRS----SSDHEATAMMKAQFMSLWD 221
Query: 78 ----QHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPA 133
HS + +++ A+N P+ D AI R+ H + P ++RE +++L
Sbjct: 222 GLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKL---------- 271
Query: 134 TEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQL 169
LK D EVA+ T+G SG ++ ++
Sbjct: 272 -----ILKNENVDRHVDLLEVAQETDGFSGSDLKEM 302
>gi|226371754 katanin p60 subunit A-like 2 [Homo sapiens]
Length = 466
Score = 46.2 bits (108), Expect = 3e-05
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 44 LFMDEADAFLRKRAT-----EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCA 98
+F+DE ++ + +R T E S ++ L + + + + ++ ASNLP + DCA
Sbjct: 278 IFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCA 337
Query: 99 INSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLT 158
+ R++ + DLP +E R+ ++ H+ L P ++ + + +Y S +++ T
Sbjct: 338 MLRRLEKRILVDLPSREARQAMI-YHW----LPPVSKSRALELHTELEY----SVLSQET 388
Query: 159 EGMSGREI 166
EG SG +I
Sbjct: 389 EGYSGSDI 396
>gi|7019569 vacuolar protein sorting factor 4A [Homo sapiens]
Length = 437
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHM---GQHSNKFMLVLASNLPEQFDCAI 99
++F+DE D+ R E S+ R FL M G +++ +++ A+N+P D AI
Sbjct: 223 IIFIDEVDSLCGSRNENE-SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAI 281
Query: 100 NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTE 159
R + ++ LP++ R ++ RLH G L E+AR TE
Sbjct: 282 RRRFEKRIYIPLPEEAARAQMFRLHL----------GSTPHNLTD----ANIHELARKTE 327
Query: 160 GMSGREIA 167
G SG +I+
Sbjct: 328 GYSGADIS 335
>gi|17865802 vacuolar protein sorting factor 4B [Homo sapiens]
Length = 444
Score = 45.8 bits (107), Expect = 4e-05
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHM---GQHSNKFMLVLASNLPEQFDCAI 99
++F+DE D+ R+ E S+ R FL M G ++ +++ A+N+P D AI
Sbjct: 230 IIFIDEIDSLCGSRSENE-SEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAI 288
Query: 100 NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTE 159
R + ++ LP+ R + +LH G + L + D+ E+ R T+
Sbjct: 289 RRRFEKRIYIPLPEPHARAAMFKLHL----------GTTQNSLTEADF----RELGRKTD 334
Query: 160 GMSGREIA 167
G SG +I+
Sbjct: 335 GYSGADIS 342
>gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]
Length = 795
Score = 43.9 bits (102), Expect = 2e-04
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 26/150 (17%)
Query: 43 LLFMDEADAFLRKRATEEI---SKDLRATLNAFLYHM-GQHSNKFMLVLAS-NLPEQFDC 97
++++DE DA +KR+T + + TLN L M G + ++VLAS N + D
Sbjct: 404 IVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDG 463
Query: 98 AIN--SRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFD--YGRKCSE 153
A+ R+D V DLP +ER + H + LKL Q Y ++
Sbjct: 464 ALMRPGRLDRHVFIDLPTLQERREIFEQHL------------KSLKLTQSSTFYSQR--- 508
Query: 154 VARLTEGMSGREIAQLAVSWQATAYASKDG 183
+A LT G SG +IA + +A +A+++G
Sbjct: 509 LAELTPGFSGADIANICN--EAALHAAREG 536
>gi|40806170 spastin isoform 2 [Homo sapiens]
Length = 584
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHS---NKFMLVLASNLPEQFDCAI 99
++F+DE D+ L +R E R + G S ++ +++ A+N P++ D A+
Sbjct: 405 IIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAV 464
Query: 100 NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTE 159
R V+ LP +E R L++ N + K + L Q ++ +++AR+T+
Sbjct: 465 LRRFIKRVYVSLPNEETRLLLLK----NLLCKQGS------PLTQ----KELAQLARMTD 510
Query: 160 GMSGREIAQLA 170
G SG ++ LA
Sbjct: 511 GYSGSDLTALA 521
>gi|11875211 spastin isoform 1 [Homo sapiens]
Length = 616
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHS---NKFMLVLASNLPEQFDCAI 99
++F+DE D+ L +R E R + G S ++ +++ A+N P++ D A+
Sbjct: 437 IIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAV 496
Query: 100 NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTE 159
R V+ LP +E R L++ N + K + L Q ++ +++AR+T+
Sbjct: 497 LRRFIKRVYVSLPNEETRLLLLK----NLLCKQGS------PLTQ----KELAQLARMTD 542
Query: 160 GMSGREIAQLA 170
G SG ++ LA
Sbjct: 543 GYSGSDLTALA 553
>gi|5901990 katanin p60 subunit A 1 [Homo sapiens]
Length = 491
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 44 LFMDEADAFLRKRATEE---ISKDLRATLNAFLYHMGQHS-----NKFMLVLAS-NLPEQ 94
+F+DE D+ +R T E S+ ++A L + +G S +K ++VLA+ N P
Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWD 364
Query: 95 FDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEV 154
D A+ R++ ++ LP + RE L+R+ R L+LA + +
Sbjct: 365 IDEALRRRLEKRIYIPLPSAKGREELLRISL------------RELELAD---DVDLASI 409
Query: 155 ARLTEGMSGREIAQL 169
A EG SG +I +
Sbjct: 410 AENMEGYSGADITNV 424
>gi|21327685 YME1-like 1 isoform 1 [Homo sapiens]
Length = 773
Score = 39.3 bits (90), Expect = 0.004
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHM-GQHSNKFMLVL-ASNLPEQFDCAI- 99
++F+DE D+ KR + R T+N L M G N+ ++++ A+N PE D A+
Sbjct: 434 VIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALI 493
Query: 100 -NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLT 158
R D+ V P + R +++ + L +FD +AR T
Sbjct: 494 RPGRFDMQVTVPRPDVKGRTEILKWY---------------LNKIKFDQSVDPEIIARGT 538
Query: 159 EGMSGREIAQLAVSWQATAYASKDG 183
G SG E+ L QA A+ DG
Sbjct: 539 VGFSGAELENLVN--QAALKAAVDG 561
>gi|7657689 YME1-like 1 isoform 3 [Homo sapiens]
Length = 716
Score = 39.3 bits (90), Expect = 0.004
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHM-GQHSNKFMLVL-ASNLPEQFDCAI- 99
++F+DE D+ KR + R T+N L M G N+ ++++ A+N PE D A+
Sbjct: 377 VIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALI 436
Query: 100 -NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLT 158
R D+ V P + R +++ + L +FD +AR T
Sbjct: 437 RPGRFDMQVTVPRPDVKGRTEILKWY---------------LNKIKFDQSVDPEIIARGT 481
Query: 159 EGMSGREIAQLAVSWQATAYASKDG 183
G SG E+ L QA A+ DG
Sbjct: 482 VGFSGAELENLVN--QAALKAAVDG 504
>gi|21361144 proteasome 26S ATPase subunit 3 [Homo sapiens]
Length = 439
Score = 38.9 bits (89), Expect = 0.005
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 43 LLFMDEADAFLRKRATEEISKD--LRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCA 98
++F+DE DA KR E + D ++ T+ L + Q + + ++ A+N + D A
Sbjct: 282 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 341
Query: 99 I--NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEV 154
+ + R+D + F +P +E R R++++H + P + + G +C V
Sbjct: 342 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAV 399
>gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens]
Length = 797
Score = 37.0 bits (84), Expect = 0.020
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 43 LLFMDEADAFLRKRATEEI--SKDLRATLNAFLYHM-GQHSNKFMLVLA-SNLPEQFDCA 98
+LF+DE DA RKR + TLN L M G ++ +++LA +N P+ D A
Sbjct: 403 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 462
Query: 99 I--NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKL-AQFDYGRKCSEVA 155
+ R D + P + R + ++H R LKL + + + ++A
Sbjct: 463 LLRPGRFDRQIFIGPPDIKGRASIFKVHL------------RPLKLDSTLEKDKLARKLA 510
Query: 156 RLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAE 211
LT G SG ++A + A + + + ++ + +K + L+ E
Sbjct: 511 SLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPE 566
>gi|31742536 fidgetin-like 1 [Homo sapiens]
Length = 674
Score = 34.7 bits (78), Expect = 0.098
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 9 GSACLACSCRGRTLLWAAPGVTL--ALLGLSLVHS-LLLFMDEADAFLRKRATEEISKDL 65
G+ + S T W G + AL ++ ++F+DE D+ L +R E
Sbjct: 459 GATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSR 518
Query: 66 RATLNAFLYHMG---QHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLV 121
R + G ++ ++V A+N P++ D A R+ ++ LP+ R+++V
Sbjct: 519 RIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIV 577
>gi|112789543 fidgetin-like 1 [Homo sapiens]
Length = 674
Score = 34.7 bits (78), Expect = 0.098
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 9 GSACLACSCRGRTLLWAAPGVTL--ALLGLSLVHS-LLLFMDEADAFLRKRATEEISKDL 65
G+ + S T W G + AL ++ ++F+DE D+ L +R E
Sbjct: 459 GATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSR 518
Query: 66 RATLNAFLYHMG---QHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLV 121
R + G ++ ++V A+N P++ D A R+ ++ LP+ R+++V
Sbjct: 519 RIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIV 577
>gi|24430151 proteasome 26S ATPase subunit 1 [Homo sapiens]
Length = 440
Score = 34.3 bits (77), Expect = 0.13
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 43 LLFMDEADAFLRKRATEEIS--KDLRATLNAFLYHMGQHSNK--FMLVLASNLPEQFDCA 98
++F+DE DA KR ++++ T+ L + ++ +++A+N E D A
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 340
Query: 99 I--NSRIDVMVHFDLPQQEERERLVRLHFDNCVL 130
+ RID + F LP ++ ++R+ ++H L
Sbjct: 341 LIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
>gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens]
Length = 406
Score = 33.5 bits (75), Expect = 0.22
Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 25/175 (14%)
Query: 43 LLFMDEADAFLRKR------ATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFD 96
++FMDE D+ R E+ + + LN + + +++A+N + D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL--DGFEATKNIKVIMATNRIDILD 302
Query: 97 CAI--NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEV 154
A+ RID + F P +E R ++++H R++ L + G ++
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIH------------SRKMNLTR---GINLRKI 347
Query: 155 ARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLK 209
A L G SG E+ + A + +T+ + V +Q+ +K +K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIK 402
>gi|4504073 glycoprotein Ib, beta polypeptide precursor [Homo
sapiens]
Length = 206
Score = 33.1 bits (74), Expect = 0.28
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 13 LACSCRGRTLLWAAPGVTLALLGLSLVHSLLLFM 46
L +C L W A LALLGL L+H+LLL +
Sbjct: 137 LRAACAPGPLCWGALAAQLALLGLGLLHALLLVL 170
>gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens]
Length = 1458
Score = 32.7 bits (73), Expect = 0.37
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 38 LVHSLLLFMDEADAF--LRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQF 95
L+ ++F DE D +R ++I + +TL A + + + + +++ A+N +
Sbjct: 496 LMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGL-DNRGEIVVIGATNRLDSI 554
Query: 96 DCAIN--SRIDVMVHFDLPQQEERERLVRLH 124
D A+ R D F+LP Q+ R+ ++++H
Sbjct: 555 DPALRRPGRFDREFLFNLPDQKARKHILQIH 585
Score = 32.3 bits (72), Expect = 0.48
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 59 EEISKDLRATLNAFLYHMGQHSNKFML----VLASNLPEQFDCAINSRIDVMVHFDLPQQ 114
E +S+ +RAT L + S F+L + S LPE+ C + + +++ P +
Sbjct: 841 EAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEEVKCIFRIQYEEVLYIQRPIE 900
Query: 115 EERERLVRLHFDNCVLKPATEGKRRLKLA 143
E+R R F +L A+ R K A
Sbjct: 901 EDR----RKFFQELILNQASMAPPRRKHA 925
>gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens]
Length = 433
Score = 32.3 bits (72), Expect = 0.48
Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 21/165 (12%)
Query: 43 LLFMDEADAFLRKRATEEISKD--LRATLNAFLYHMGQHSNK--FMLVLASNLPEQFDCA 98
L+F DE DA R + D ++ T+ + + + +++A+N P+ D A
Sbjct: 271 LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 330
Query: 99 IN--SRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVAR 156
+ R+D + F LP E R + ++H + E R +L +AR
Sbjct: 331 LMRPGRLDRKIEFSLPDLEGRTHIFKIH----ARSMSVERDIRFEL-----------LAR 375
Query: 157 LTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQY 201
L +G EI + A ++ + TE V ++ Y
Sbjct: 376 LCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 32.0 bits (71), Expect = 0.63
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 43 LLFMDEADAF--LRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAIN 100
++F DE D +R ++I + +TL A + + + +++ A+N + D A+
Sbjct: 527 IIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRG-EIVVIGATNRLDSIDPALR 585
Query: 101 --SRIDVMVHFDLPQQEERERLVRLHFDNCVLKP 132
R D F LP +E R+ ++++H + KP
Sbjct: 586 RPGRFDREFLFSLPDKEARKEILKIHTRDWNPKP 619
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 30.0 bits (66), Expect = 2.4
Identities = 34/108 (31%), Positives = 40/108 (37%), Gaps = 11/108 (10%)
Query: 179 ASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDP 238
A K EA DA +D V+Q A GPG G PL G + E A DP
Sbjct: 46 ARKSLAEVEAGKDASSRDPVRQLETP----DAAGPGAGQASPLEGSEAEEEED---AEDP 98
Query: 239 SYPCLAGPCTFRICSWMGTGLCP-GPLSPRMSC---GGGRPFCPPGHP 282
P L + + P G L+ C GGG PPG P
Sbjct: 99 RRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSP 146
>gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]
Length = 750
Score = 30.0 bits (66), Expect = 2.4
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCAI- 99
++F DE DA +R+ E +R +N L M + + ++ A+N P+ D AI
Sbjct: 571 VIFFDEVDALCPRRSDRETGASVR-VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAIL 629
Query: 100 -NSRIDVMVHFDLPQQEERERLVR 122
R+D + LP +R +++
Sbjct: 630 RPGRLDKTLFVGLPPPADRLAILK 653
>gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]
Length = 856
Score = 30.0 bits (66), Expect = 2.4
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 43 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCAI- 99
++F DE DA +R+ E +R +N L M + + ++ A+N P+ D AI
Sbjct: 677 VIFFDEVDALCPRRSDRETGASVR-VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAIL 735
Query: 100 -NSRIDVMVHFDLPQQEERERLVR 122
R+D + LP +R +++
Sbjct: 736 RPGRLDKTLFVGLPPPADRLAILK 759
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 29.3 bits (64), Expect = 4.1
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 213 PGRGVEHPLSGVQGETL---TSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPR 267
P +E P G +G L + +S A DPS + GP + + +++ TG PGP SPR
Sbjct: 511 PAAAIEEPW-GREGPALLLLSRFSQAPDPSGALVTGPALYGLLTYV-TG-APGPPSPR 565
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 29.3 bits (64), Expect = 4.1
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 213 PGRGVEHPLSGVQGETL---TSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPR 267
P +E P G +G L + +S A DPS + GP + + +++ TG PGP SPR
Sbjct: 511 PAAAIEEPW-GREGPALLLLSRFSQAPDPSGALVTGPALYGLLTYV-TG-APGPPSPR 565
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,472,273
Number of Sequences: 37866
Number of extensions: 587365
Number of successful extensions: 1637
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1612
Number of HSP's gapped (non-prelim): 52
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.