Guide to the Human Genome
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Search of human proteins with 169214487

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169214487 PREDICTED: hypothetical protein [Homo sapiens]
         (222 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169214094 PREDICTED: hypothetical protein [Homo sapiens]           465   e-131
gi|169214487 PREDICTED: hypothetical protein [Homo sapiens]           465   e-131
gi|169213441 PREDICTED: hypothetical protein [Homo sapiens]           465   e-131
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]    33   0.19 
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]     33   0.19 
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ...    33   0.19 
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            33   0.19 
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ...    33   0.19 
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            33   0.19 
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]            33   0.25 
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]            33   0.25 
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ...    33   0.25 
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ...    33   0.25 
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ...    33   0.25 
gi|203098098 shroom family member 3 protein [Homo sapiens]             32   0.33 
gi|191252816 extracellular leucine-rich repeat and fibronectin t...    32   0.43 
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    32   0.43 
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    32   0.56 
gi|239756649 PREDICTED: hypothetical protein [Homo sapiens]            31   0.96 
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    31   0.96 
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi...    30   1.3  
gi|71773480 aldehyde oxidase 1 [Homo sapiens]                          30   1.3  
gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]            30   1.3  
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    30   1.3  
gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo ...    30   1.3  
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    30   1.3  
gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens]         30   1.3  
gi|239749473 PREDICTED: hypothetical protein XP_002347063 [Homo ...    30   1.3  
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ...    30   1.3  

>gi|169214094 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 222

 Score =  465 bits (1197), Expect = e-131
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
           MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN
Sbjct: 1   MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60

Query: 61  HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
           HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA
Sbjct: 61  HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120

Query: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
           RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA
Sbjct: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180

Query: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
           PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK
Sbjct: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222


>gi|169214487 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 222

 Score =  465 bits (1197), Expect = e-131
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
           MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN
Sbjct: 1   MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60

Query: 61  HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
           HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA
Sbjct: 61  HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120

Query: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
           RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA
Sbjct: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180

Query: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
           PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK
Sbjct: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222


>gi|169213441 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 222

 Score =  465 bits (1197), Expect = e-131
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
           MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN
Sbjct: 1   MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60

Query: 61  HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
           HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA
Sbjct: 61  HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120

Query: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
           RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA
Sbjct: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180

Query: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
           PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK
Sbjct: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 13/117 (11%)

Query: 35  RWGKAEKRPRLADESCDYQVTWVTPNHDG-------LGLSARPAARRRLESP----ALPS 83
           RWG+  K+PR   +         T    G       +G+ +R   RRR + P    A  +
Sbjct: 317 RWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAA 376

Query: 84  GGHRRYLPKRREVCVSKRRGTQAHQP--GRPQGKAERPARGGPRWCQSSRPSVHAPR 138
           G   R    ++ +  +KRRG    +P    P+ +A++     PR   S +P    P+
Sbjct: 377 GAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPK 433


>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
          Length = 600

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 14/94 (14%)

Query: 60  NHDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKR-----RGTQAHQPGRPQG 114
           N + LG + RP   +   SP           P+  E   +K+     R +++ +P  PQ 
Sbjct: 13  NQEELGETRRPWEGKTAASPQYSE-------PESSEPLEAKQGPETGRQSRSSRPWSPQS 65

Query: 115 KAERPARGGPRWCQSSRPSVHAPRPPSNLACSPL 148
           +A+ P  GGP   ++S P+  +PR PS+ + SPL
Sbjct: 66  RAKTPL-GGPAGPETSSPAPVSPREPSS-SPSPL 97


>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
          Length = 716

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 14/94 (14%)

Query: 60  NHDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKR-----RGTQAHQPGRPQG 114
           N + LG + RP   +   SP           P+  E   +K+     R +++ +P  PQ 
Sbjct: 13  NQEELGETRRPWEGKTAASPQYSE-------PESSEPLEAKQGPETGRQSRSSRPWSPQS 65

Query: 115 KAERPARGGPRWCQSSRPSVHAPRPPSNLACSPL 148
           +A+ P  GGP   ++S P+  +PR PS+ + SPL
Sbjct: 66  RAKTPL-GGPAGPETSSPAPVSPREPSS-SPSPL 97


>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
           sapiens]
          Length = 400

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 19/104 (18%)

Query: 53  QVTWVTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKR---REVCVSKRRGTQAH-- 107
           Q   + P+H     S  PA R     P        R+LP          + RRG++A   
Sbjct: 69  QAKAINPHHTA---SLSPAGRGAQRPP-------ERFLPSSVSAGSAARTLRRGSEARKA 118

Query: 108 QPGRPQGKAERPARGGPRWCQSSRP----SVHAPRPPSNLACSP 147
           Q  RP G A+    GG RW Q   P     +    PPS+L   P
Sbjct: 119 QTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLP 162


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 23/62 (37%), Positives = 25/62 (40%)

Query: 69  RPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQ 128
           R AARR L SP  P+   R   P R        R   AH PGR  G+  R       W Q
Sbjct: 141 RLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQ 200

Query: 129 SS 130
            S
Sbjct: 201 RS 202



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 11/83 (13%)

Query: 66  LSARPAARRRLESPALPSGGHRRYL-----------PKRREVCVSKRRGTQAHQPGRPQG 114
           LS  P   R    P+ P  G RR             P      ++ RR   + +   P G
Sbjct: 99  LSLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPG 158

Query: 115 KAERPARGGPRWCQSSRPSVHAP 137
           +   P R GP      RPS H P
Sbjct: 159 RLSAPPRHGPHPQSFRRPSAHPP 181


>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
           sapiens]
          Length = 400

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 19/104 (18%)

Query: 53  QVTWVTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKR---REVCVSKRRGTQAH-- 107
           Q   + P+H     S  PA R     P        R+LP          + RRG++A   
Sbjct: 69  QAKAINPHHTA---SLSPAGRGAQRPP-------ERFLPSSVSAGSAARTLRRGSEARKA 118

Query: 108 QPGRPQGKAERPARGGPRWCQSSRP----SVHAPRPPSNLACSP 147
           Q  RP G A+    GG RW Q   P     +    PPS+L   P
Sbjct: 119 QTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLP 162


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 23/62 (37%), Positives = 25/62 (40%)

Query: 69  RPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQ 128
           R AARR L SP  P+   R   P R        R   AH PGR  G+  R       W Q
Sbjct: 141 RLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQ 200

Query: 129 SS 130
            S
Sbjct: 201 RS 202



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 11/83 (13%)

Query: 66  LSARPAARRRLESPALPSGGHRRYL-----------PKRREVCVSKRRGTQAHQPGRPQG 114
           LS  P   R    P+ P  G RR             P      ++ RR   + +   P G
Sbjct: 99  LSLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPG 158

Query: 115 KAERPARGGPRWCQSSRPSVHAP 137
           +   P R GP      RPS H P
Sbjct: 159 RLSAPPRHGPHPQSFRRPSAHPP 181


>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 63  GLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARG 122
           G G    PAA+RR  +P  P       +P  R    + R G+ A  PG P       A+ 
Sbjct: 144 GAGTGLYPAAQRRAPAPLRPCA-----IPAPRRPAAAARLGSAARSPGAPPA-GRSLAQP 197

Query: 123 GPRWCQSSRPSVHAPRPPSNLA 144
            P+ C  +R   +    P++ A
Sbjct: 198 HPQSCPLARSPAYRSTGPNDPA 219


>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 111 RPQGKAERPARGGPRWCQSSRPSVHAPR-----PPSNLACSP 147
           R  G   RP RGGP WC + RPS  A R      P    C+P
Sbjct: 94  RLNGAGPRPKRGGP-WCGAKRPSQSAERSAASSTPPEKTCAP 134


>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
           sapiens]
          Length = 250

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 63  GLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARG 122
           G G    PAA+RR  +P  P       +P  R    + R G+ A  PG P       A+ 
Sbjct: 97  GAGTGLYPAAQRRAPAPLRPCA-----IPAPRRPAAAARLGSAARSPGAPPA-GRSLAQP 150

Query: 123 GPRWCQSSRPSVHAPRPPSNLA 144
            P+ C  +R   +    P++ A
Sbjct: 151 HPQSCPLARSPAYRSTGPNDPA 172


>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
           sapiens]
          Length = 261

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 111 RPQGKAERPARGGPRWCQSSRPSVHAPR-----PPSNLACSP 147
           R  G   RP RGGP WC + RPS  A R      P    C+P
Sbjct: 94  RLNGAGPRPKRGGP-WCGAKRPSQSAERSAASSTPPEKTCAP 134


>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
           sapiens]
          Length = 250

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 63  GLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARG 122
           G G    PAA+RR  +P  P       +P  R    + R G+ A  PG P       A+ 
Sbjct: 97  GAGTGLYPAAQRRAPAPLRPCA-----IPAPRRPAAAARLGSAARSPGAPPA-GRSLAQP 150

Query: 123 GPRWCQSSRPSVHAPRPPSNLA 144
            P+ C  +R   +    P++ A
Sbjct: 151 HPQSCPLARSPAYRSTGPNDPA 172


>gi|203098098 shroom family member 3 protein [Homo sapiens]
          Length = 1996

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 27/162 (16%)

Query: 57   VTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRR-----GTQAHQPGR 111
            VTP    L     PAARR         G  RR  P++++   S+       G        
Sbjct: 988  VTPAEGDLARPVPPAARR---------GARRRLTPEQKKRSYSEPEKMNEVGIVEEAEPA 1038

Query: 112  PQGKAERPARGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVL 171
            P G    P R G R+ +SS             ACS L    P  LK+     +A  DY+ 
Sbjct: 1039 PLG----PQRNGMRFPESSVADRRRLFERDGKACSTLSLSGP-ELKQFQQSALA--DYIQ 1091

Query: 172  RVAALFSRAPVTEDGCGETQAEVFPVNEVAGSAHALRAGPCA 213
            R      + P +  GC  +  E  P+ E A SA+ L+ GP A
Sbjct: 1092 RKT---GKRPTSAAGC--SLQEPGPLRERAQSAY-LQPGPAA 1127


>gi|191252816 extracellular leucine-rich repeat and fibronectin type
           III domain containing 1 [Homo sapiens]
          Length = 828

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 18/83 (21%)

Query: 73  RRRLESPALPSG---------GHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGG 123
           R + ESP + SG         GHR  L K + VC       +   P RP     +P R  
Sbjct: 217 RMQCESPPVYSGYYLLGQGRRGHRSILSKLQSVCTEDSYAAEVVGPPRPASGRSQPGRS- 275

Query: 124 PRWCQSSRPSVHAPRPPSNLACS 146
                   P    P  PS++ C+
Sbjct: 276 --------PPPPPPPEPSDMPCA 290


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 69  RPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRP---QGKAERPARGGPR 125
           R + RRR  + A   G  RR   + R+     RR   A+  GRP      A R ARG   
Sbjct: 816 RESGRRR--AGATSQGAIRRAASRARKG--ESRRPLPANSAGRPALPSPAAARSARGS-- 869

Query: 126 W-CQSSRPSVHAPRPPSNLACSP 147
           W  ++SRPS  APR P N    P
Sbjct: 870 WGLRASRPSRAAPRGPPNFQRCP 892


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 20/113 (17%)

Query: 72  ARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSR 131
           AR R  +  L + G       +  V  +    T +  PG PQ   + P    P       
Sbjct: 277 ARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP------- 329

Query: 132 PSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRAPVTE 184
           PS   P PPS     P     P P + ++SR             LF  +P TE
Sbjct: 330 PSSVPPVPPSEALPPPACPSAPAPRRSIISR-------------LFGTSPATE 369


>gi|239756649 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 318

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 68  ARPAARRRLES--PALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAER-PARGG 123
           +RPAAR  +E   PA+ + G   +L     +C S +   Q   P  P G+  R PAR G
Sbjct: 226 SRPAARTGVEPAVPAMVTTGRPPHLRFATGLCASGKAPAQGAFPAAPPGRGRRGPARTG 284


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 103 GTQAHQPGRPQGKAERPARGGPRWCQSSRPSVHAPRP 139
           G Q+H+P  P GK ERP   G    QS  P  H  +P
Sbjct: 128 GNQSHRPPPPPGKPERPPPQGGN--QSQGPPPHPGKP 162


>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
           sapiens]
          Length = 520

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 72  ARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSR 131
           AR R  +  L + G       +  V  +    T +  PG PQ   + P    P       
Sbjct: 277 ARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP------- 329

Query: 132 PSVHAPRPPSNLACSPLWFVLPVPLKELVSR 162
           PS   P PPS     P     P P + ++SR
Sbjct: 330 PSSVPPVPPSEALPPPACPSAPAPRRSIISR 360


>gi|71773480 aldehyde oxidase 1 [Homo sapiens]
          Length = 1338

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 170 VLRVAALFSRAPVTEDGCGETQAEVFPVNEVAGSAHALRAGPC 212
           ++ + +L+  A  T +G G T   + PV E     H  + G C
Sbjct: 75  LIPICSLYGAAVTTVEGIGSTHTRIHPVQERIAKCHGTQCGFC 117


>gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 150

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 19/83 (22%)

Query: 59  PNHDGLGLSARPAARRRLESPALPSGGHR--------------RYLPKRREVCVSKRRGT 104
           P      LSAR ++RR L   ALP  G                R  P RR      RR  
Sbjct: 65  PPRPSPALSAR-SSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTA 123

Query: 105 QAHQPG----RPQGKAERPARGG 123
           +  +PG    RP+G A RP  GG
Sbjct: 124 RGWEPGPTLGRPRGPARRPPLGG 146


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 75  RLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSRPSV 134
           R+ +    + G     PKR  +    RR T    PG P     R +R         RP+ 
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAP 194

Query: 135 HA-PRPPS 141
            A PRPP+
Sbjct: 195 SARPRPPT 202


>gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
           sapiens]
          Length = 150

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 19/83 (22%)

Query: 59  PNHDGLGLSARPAARRRLESPALPSGGHR--------------RYLPKRREVCVSKRRGT 104
           P      LSAR ++RR L   ALP  G                R  P RR      RR  
Sbjct: 65  PPRPSPALSAR-SSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTA 123

Query: 105 QAHQPG----RPQGKAERPARGG 123
           +  +PG    RP+G A RP  GG
Sbjct: 124 RGWEPGPTLGRPRGPARRPPLGG 146


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 75  RLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSRPSV 134
           R+ +    + G     PKR  +    RR T    PG P     R +R         RP+ 
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAP 194

Query: 135 HA-PRPPS 141
            A PRPP+
Sbjct: 195 SARPRPPT 202


>gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens]
          Length = 758

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 11/111 (9%)

Query: 34  RRWGKAEKRPRLADESCDYQVTWVTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKR 93
           RR G+ ++R R    +   Q       H G G +A   A R++ S  +P    RR  P +
Sbjct: 53  RRRGRRQRRHRRGLRARRPQ------RHGGSGTAAHAGAARQVASGFMPHRRRRRTAPGQ 106

Query: 94  REVCVSKRRGTQAHQPGRPQGKAERPA----RGGPRWCQSSRPSVHAPRPP 140
                 +R+G     PG   G+    A     GG      + P++  P PP
Sbjct: 107 PWASGFRRQGRGLSGPGAGSGRGRGGALIGRAGGGAMAAKTSPAM-LPLPP 156



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 78  SPALPSG--GHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSRPSVH 135
           SPA PS     R    +     +   RG+Q   PGR +G+ +R  R G R   + RP  H
Sbjct: 18  SPATPSAPAAQRALAEQPMSARLGPTRGSQGSAPGRRRGRRQRRHRRGLR---ARRPQRH 74


>gi|239749473 PREDICTED: hypothetical protein XP_002347063 [Homo
           sapiens]
          Length = 119

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/101 (31%), Positives = 37/101 (36%), Gaps = 25/101 (24%)

Query: 30  KTGSRRWGK------AEKRPRLADESCDYQVTWVTPNHDGLGLSARPAARRRLESPALPS 83
           + G R W +       EK PRL           V PNH  +GLS R        S  L S
Sbjct: 28  RRGGRDWARNEAGRDLEKPPRLHCSGRGRLEEPVPPNHLPVGLSVRG-------SQVLSS 80

Query: 84  GGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGP 124
            G RR             R T    P R   + E+ ARGGP
Sbjct: 81  AGPRRC------------RLTGTRNPVRGPRRVEQIARGGP 109


>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
           sapiens]
          Length = 193

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 62  DGLGLSARPAARRRLESPALPS----GGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAE 117
           +G  ++ RP     L  P +P+    GG RR   +         RG+     GR +G+AE
Sbjct: 98  EGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAE 157

Query: 118 RPARGGPRWCQSSRPSVHAPRPP 140
            PA G       ++P      PP
Sbjct: 158 PPALGAGACDSRNQPDSQRTAPP 180


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,731,132
Number of Sequences: 37866
Number of extensions: 590224
Number of successful extensions: 2155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 2102
Number of HSP's gapped (non-prelim): 127
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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