LOC100288002 17712

Name: LOC100288002	Sequence: fasta or formatted (400aa)		NCBI GI: 239743688
Description: PREDICTED: hypothetical protein XP_002342946		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.8 55 3 C cysteine 1.0 4 1 D aspartate 1.2 5 1 E glutamate 6.2 25 2 F phenylalanine 2.2 9 1 G glycine 16.2 65 4 H histidine 1.8 7 2 I isoleucine 1.0 4 1 K lysine 2.0 8 1 L leucine 7.2 29 2 M methionine 0.5 2 1 N asparagine 1.5 6 1 P proline 11.5 46 3 Q glutamine 2.8 11 1 R arginine 13.8 55 4 S serine 8.8 35 2 T threonine 3.0 12 1 V valine 3.8 15 1 W tryptophan 1.8 7 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342946 LOC100291533 1.000 PREDICTED: hypothetical protein XP_002347080 LOC100294035 0.361 PREDICTED: hypothetical protein COL1A1 0.047 alpha 1 type I collagen preproprotein SRRM2 0.039 splicing coactivator subunit SRm300 COL3A1 0.038 collagen type III alpha 1 preproprotein LOC100292370 0.036 PREDICTED: hypothetical protein LOC645321 0.035 PREDICTED: hypothetical protein LOC645321 0.035 PREDICTED: hypothetical protein TAF4 0.034 TBP-associated factor 4 FLJ31945 0.034 PREDICTED: hypothetical protein LOC100288606 0.033 PREDICTED: hypothetical protein XP_002342652 LOC100290372 0.031 PREDICTED: hypothetical protein XP_002346788 TRNP1 0.031 TMF regulated nuclear protein FLJ31945 0.031 PREDICTED: hypothetical protein FLJ31945 0.031 PREDICTED: hypothetical protein COL2A1 0.031 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.031 collagen, type II, alpha 1 isoform 2 precursor [Hom... ZNF469 0.030 zinc finger protein 469 LOC645602 0.030 PREDICTED: hypothetical protein LOC645602 0.030 PREDICTED: hypothetical protein LOC645602 0.030 PREDICTED: hypothetical protein UNCX 0.030 UNC homeobox COL5A2 0.029 alpha 2 type V collagen preproprotein LOC100289721 0.029 PREDICTED: hypothetical protein XP_002347280 LOC100289284 0.029 PREDICTED: hypothetical protein XP_002342335 LOC646509 0.028 PREDICTED: hypothetical protein ZNF318 0.028 zinc finger protein 318 SHANK1 0.028 SH3 and multiple ankyrin repeat domains 1 RPH3A 0.028 rabphilin 3A homolog isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.