Guide to the Human Genome
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Name: AOX1 Sequence: fasta or formatted (1338aa) NCBI GI: 71773480
Description:

aldehyde oxidase 1

Referenced in:

Pteridines and Molybdopterin
Superoxide Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         93           3
 C cysteine            3.1         42           2
 D aspartate           4.1         55           2
 E glutamate           6.7         90           3
 F phenylalanine       3.9         52           2
 G glycine             8.1        109           4
 H histidine           2.9         39           2
 I isoleucine          6.7         89           2
 K lysine              6.2         83           3
 L leucine             9.3        124           2
 M methionine          3.2         43           2
 N asparagine          4.0         54           1
 P proline             5.3         71           2
 Q glutamine           3.8         51           1
 R arginine            4.3         57           2
 S serine              6.2         83           2
 T threonine           4.8         64           2
 V valine              6.7         89           2
 W tryptophan          0.7         10           1
 Y tyrosine            3.0         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde oxidase 1 
XDH                   0.485   xanthine dehydrogenase 
KRTAP5-9              0.004   keratin associated protein 5-9 
KRTAP5-7              0.003   keratin associated protein 5-7 
DNAH5                 0.002   dynein, axonemal, heavy chain 5 
ARHGAP26              0.002   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.002   GTPase regulator associated with the focal adhesion k...
LY9                   0.002   lymphocyte antigen 9 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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