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Search of human proteins with 169213441
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213441 PREDICTED: hypothetical protein [Homo sapiens]
(222 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214094 PREDICTED: hypothetical protein [Homo sapiens] 465 e-131
gi|169214487 PREDICTED: hypothetical protein [Homo sapiens] 465 e-131
gi|169213441 PREDICTED: hypothetical protein [Homo sapiens] 465 e-131
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] 33 0.19
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 33 0.19
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 33 0.19
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 33 0.19
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ... 33 0.25
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ... 33 0.25
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ... 33 0.25
gi|203098098 shroom family member 3 protein [Homo sapiens] 32 0.33
gi|191252816 extracellular leucine-rich repeat and fibronectin t... 32 0.43
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 32 0.43
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 32 0.56
gi|239756649 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 31 0.96
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 30 1.3
gi|71773480 aldehyde oxidase 1 [Homo sapiens] 30 1.3
gi|239757158 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 30 1.3
gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo ... 30 1.3
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 30 1.3
gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens] 30 1.3
gi|239749473 PREDICTED: hypothetical protein XP_002347063 [Homo ... 30 1.3
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ... 30 1.3
>gi|169214094 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 465 bits (1197), Expect = e-131
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN
Sbjct: 1 MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
Query: 61 HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA
Sbjct: 61 HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
Query: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA
Sbjct: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
Query: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK
Sbjct: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
>gi|169214487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 465 bits (1197), Expect = e-131
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN
Sbjct: 1 MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
Query: 61 HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA
Sbjct: 61 HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
Query: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA
Sbjct: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
Query: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK
Sbjct: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
>gi|169213441 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 465 bits (1197), Expect = e-131
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN
Sbjct: 1 MGALGVRGWAPDFSSRSGKLLAFFEDSSCKTGSRRWGKAEKRPRLADESCDYQVTWVTPN 60
Query: 61 HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA
Sbjct: 61 HDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPA 120
Query: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA
Sbjct: 121 RGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRA 180
Query: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK
Sbjct: 181 PVTEDGCGETQAEVFPVNEVAGSAHALRAGPCARAPGKPCEK 222
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 33.9 bits (76), Expect = 0.11
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 35 RWGKAEKRPRLADESCDYQVTWVTPNHDG-------LGLSARPAARRRLESP----ALPS 83
RWG+ K+PR + T G +G+ +R RRR + P A +
Sbjct: 317 RWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAA 376
Query: 84 GGHRRYLPKRREVCVSKRRGTQAHQP--GRPQGKAERPARGGPRWCQSSRPSVHAPR 138
G R ++ + +KRRG +P P+ +A++ PR S +P P+
Sbjct: 377 GAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPK 433
>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
Length = 600
Score = 33.1 bits (74), Expect = 0.19
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 60 NHDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKR-----RGTQAHQPGRPQG 114
N + LG + RP + SP P+ E +K+ R +++ +P PQ
Sbjct: 13 NQEELGETRRPWEGKTAASPQYSE-------PESSEPLEAKQGPETGRQSRSSRPWSPQS 65
Query: 115 KAERPARGGPRWCQSSRPSVHAPRPPSNLACSPL 148
+A+ P GGP ++S P+ +PR PS+ + SPL
Sbjct: 66 RAKTPL-GGPAGPETSSPAPVSPREPSS-SPSPL 97
>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
Length = 716
Score = 33.1 bits (74), Expect = 0.19
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 60 NHDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKR-----RGTQAHQPGRPQG 114
N + LG + RP + SP P+ E +K+ R +++ +P PQ
Sbjct: 13 NQEELGETRRPWEGKTAASPQYSE-------PESSEPLEAKQGPETGRQSRSSRPWSPQS 65
Query: 115 KAERPARGGPRWCQSSRPSVHAPRPPSNLACSPL 148
+A+ P GGP ++S P+ +PR PS+ + SPL
Sbjct: 66 RAKTPL-GGPAGPETSSPAPVSPREPSS-SPSPL 97
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 33.1 bits (74), Expect = 0.19
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 19/104 (18%)
Query: 53 QVTWVTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKR---REVCVSKRRGTQAH-- 107
Q + P+H S PA R P R+LP + RRG++A
Sbjct: 69 QAKAINPHHTA---SLSPAGRGAQRPP-------ERFLPSSVSAGSAARTLRRGSEARKA 118
Query: 108 QPGRPQGKAERPARGGPRWCQSSRP----SVHAPRPPSNLACSP 147
Q RP G A+ GG RW Q P + PPS+L P
Sbjct: 119 QTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLP 162
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 33.1 bits (74), Expect = 0.19
Identities = 23/62 (37%), Positives = 25/62 (40%)
Query: 69 RPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQ 128
R AARR L SP P+ R P R R AH PGR G+ R W Q
Sbjct: 141 RLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQ 200
Query: 129 SS 130
S
Sbjct: 201 RS 202
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 11/83 (13%)
Query: 66 LSARPAARRRLESPALPSGGHRRYL-----------PKRREVCVSKRRGTQAHQPGRPQG 114
LS P R P+ P G RR P ++ RR + + P G
Sbjct: 99 LSLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPG 158
Query: 115 KAERPARGGPRWCQSSRPSVHAP 137
+ P R GP RPS H P
Sbjct: 159 RLSAPPRHGPHPQSFRRPSAHPP 181
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 33.1 bits (74), Expect = 0.19
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 19/104 (18%)
Query: 53 QVTWVTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKR---REVCVSKRRGTQAH-- 107
Q + P+H S PA R P R+LP + RRG++A
Sbjct: 69 QAKAINPHHTA---SLSPAGRGAQRPP-------ERFLPSSVSAGSAARTLRRGSEARKA 118
Query: 108 QPGRPQGKAERPARGGPRWCQSSRP----SVHAPRPPSNLACSP 147
Q RP G A+ GG RW Q P + PPS+L P
Sbjct: 119 QTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLP 162
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 33.1 bits (74), Expect = 0.19
Identities = 23/62 (37%), Positives = 25/62 (40%)
Query: 69 RPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQ 128
R AARR L SP P+ R P R R AH PGR G+ R W Q
Sbjct: 141 RLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQ 200
Query: 129 SS 130
S
Sbjct: 201 RS 202
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 11/83 (13%)
Query: 66 LSARPAARRRLESPALPSGGHRRYL-----------PKRREVCVSKRRGTQAHQPGRPQG 114
LS P R P+ P G RR P ++ RR + + P G
Sbjct: 99 LSLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPG 158
Query: 115 KAERPARGGPRWCQSSRPSVHAP 137
+ P R GP RPS H P
Sbjct: 159 RLSAPPRHGPHPQSFRRPSAHPP 181
>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 32.7 bits (73), Expect = 0.25
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 63 GLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARG 122
G G PAA+RR +P P +P R + R G+ A PG P A+
Sbjct: 144 GAGTGLYPAAQRRAPAPLRPCA-----IPAPRRPAAAARLGSAARSPGAPPA-GRSLAQP 197
Query: 123 GPRWCQSSRPSVHAPRPPSNLA 144
P+ C +R + P++ A
Sbjct: 198 HPQSCPLARSPAYRSTGPNDPA 219
>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 111 RPQGKAERPARGGPRWCQSSRPSVHAPR-----PPSNLACSP 147
R G RP RGGP WC + RPS A R P C+P
Sbjct: 94 RLNGAGPRPKRGGP-WCGAKRPSQSAERSAASSTPPEKTCAP 134
>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
sapiens]
Length = 250
Score = 32.7 bits (73), Expect = 0.25
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 63 GLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARG 122
G G PAA+RR +P P +P R + R G+ A PG P A+
Sbjct: 97 GAGTGLYPAAQRRAPAPLRPCA-----IPAPRRPAAAARLGSAARSPGAPPA-GRSLAQP 150
Query: 123 GPRWCQSSRPSVHAPRPPSNLA 144
P+ C +R + P++ A
Sbjct: 151 HPQSCPLARSPAYRSTGPNDPA 172
>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 111 RPQGKAERPARGGPRWCQSSRPSVHAPR-----PPSNLACSP 147
R G RP RGGP WC + RPS A R P C+P
Sbjct: 94 RLNGAGPRPKRGGP-WCGAKRPSQSAERSAASSTPPEKTCAP 134
>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
sapiens]
Length = 250
Score = 32.7 bits (73), Expect = 0.25
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 63 GLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARG 122
G G PAA+RR +P P +P R + R G+ A PG P A+
Sbjct: 97 GAGTGLYPAAQRRAPAPLRPCA-----IPAPRRPAAAARLGSAARSPGAPPA-GRSLAQP 150
Query: 123 GPRWCQSSRPSVHAPRPPSNLA 144
P+ C +R + P++ A
Sbjct: 151 HPQSCPLARSPAYRSTGPNDPA 172
>gi|203098098 shroom family member 3 protein [Homo sapiens]
Length = 1996
Score = 32.3 bits (72), Expect = 0.33
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 27/162 (16%)
Query: 57 VTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKRREVCVSKRR-----GTQAHQPGR 111
VTP L PAARR G RR P++++ S+ G
Sbjct: 988 VTPAEGDLARPVPPAARR---------GARRRLTPEQKKRSYSEPEKMNEVGIVEEAEPA 1038
Query: 112 PQGKAERPARGGPRWCQSSRPSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVL 171
P G P R G R+ +SS ACS L P LK+ +A DY+
Sbjct: 1039 PLG----PQRNGMRFPESSVADRRRLFERDGKACSTLSLSGP-ELKQFQQSALA--DYIQ 1091
Query: 172 RVAALFSRAPVTEDGCGETQAEVFPVNEVAGSAHALRAGPCA 213
R + P + GC + E P+ E A SA+ L+ GP A
Sbjct: 1092 RKT---GKRPTSAAGC--SLQEPGPLRERAQSAY-LQPGPAA 1127
>gi|191252816 extracellular leucine-rich repeat and fibronectin type
III domain containing 1 [Homo sapiens]
Length = 828
Score = 32.0 bits (71), Expect = 0.43
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 18/83 (21%)
Query: 73 RRRLESPALPSG---------GHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGG 123
R + ESP + SG GHR L K + VC + P RP +P R
Sbjct: 217 RMQCESPPVYSGYYLLGQGRRGHRSILSKLQSVCTEDSYAAEVVGPPRPASGRSQPGRS- 275
Query: 124 PRWCQSSRPSVHAPRPPSNLACS 146
P P PS++ C+
Sbjct: 276 --------PPPPPPPEPSDMPCA 290
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 32.0 bits (71), Expect = 0.43
Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 69 RPAARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRP---QGKAERPARGGPR 125
R + RRR + A G RR + R+ RR A+ GRP A R ARG
Sbjct: 816 RESGRRR--AGATSQGAIRRAASRARKG--ESRRPLPANSAGRPALPSPAAARSARGS-- 869
Query: 126 W-CQSSRPSVHAPRPPSNLACSP 147
W ++SRPS APR P N P
Sbjct: 870 WGLRASRPSRAAPRGPPNFQRCP 892
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 31.6 bits (70), Expect = 0.56
Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 20/113 (17%)
Query: 72 ARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSR 131
AR R + L + G + V + T + PG PQ + P P
Sbjct: 277 ARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP------- 329
Query: 132 PSVHAPRPPSNLACSPLWFVLPVPLKELVSRTMASIDYVLRVAALFSRAPVTE 184
PS P PPS P P P + ++SR LF +P TE
Sbjct: 330 PSSVPPVPPSEALPPPACPSAPAPRRSIISR-------------LFGTSPATE 369
>gi|239756649 PREDICTED: hypothetical protein [Homo sapiens]
Length = 318
Score = 30.8 bits (68), Expect = 0.96
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 68 ARPAARRRLES--PALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAER-PARGG 123
+RPAAR +E PA+ + G +L +C S + Q P P G+ R PAR G
Sbjct: 226 SRPAARTGVEPAVPAMVTTGRPPHLRFATGLCASGKAPAQGAFPAAPPGRGRRGPARTG 284
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 30.8 bits (68), Expect = 0.96
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 103 GTQAHQPGRPQGKAERPARGGPRWCQSSRPSVHAPRP 139
G Q+H+P P GK ERP G QS P H +P
Sbjct: 128 GNQSHRPPPPPGKPERPPPQGGN--QSQGPPPHPGKP 162
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 72 ARRRLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSR 131
AR R + L + G + V + T + PG PQ + P P
Sbjct: 277 ARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP------- 329
Query: 132 PSVHAPRPPSNLACSPLWFVLPVPLKELVSR 162
PS P PPS P P P + ++SR
Sbjct: 330 PSSVPPVPPSEALPPPACPSAPAPRRSIISR 360
>gi|71773480 aldehyde oxidase 1 [Homo sapiens]
Length = 1338
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 170 VLRVAALFSRAPVTEDGCGETQAEVFPVNEVAGSAHALRAGPC 212
++ + +L+ A T +G G T + PV E H + G C
Sbjct: 75 LIPICSLYGAAVTTVEGIGSTHTRIHPVQERIAKCHGTQCGFC 117
>gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 19/83 (22%)
Query: 59 PNHDGLGLSARPAARRRLESPALPSGGHR--------------RYLPKRREVCVSKRRGT 104
P LSAR ++RR L ALP G R P RR RR
Sbjct: 65 PPRPSPALSAR-SSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTA 123
Query: 105 QAHQPG----RPQGKAERPARGG 123
+ +PG RP+G A RP GG
Sbjct: 124 RGWEPGPTLGRPRGPARRPPLGG 146
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 30.4 bits (67), Expect = 1.3
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 75 RLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSRPSV 134
R+ + + G PKR + RR T PG P R +R RP+
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAP 194
Query: 135 HA-PRPPS 141
A PRPP+
Sbjct: 195 SARPRPPT 202
>gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
sapiens]
Length = 150
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 19/83 (22%)
Query: 59 PNHDGLGLSARPAARRRLESPALPSGGHR--------------RYLPKRREVCVSKRRGT 104
P LSAR ++RR L ALP G R P RR RR
Sbjct: 65 PPRPSPALSAR-SSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTA 123
Query: 105 QAHQPG----RPQGKAERPARGG 123
+ +PG RP+G A RP GG
Sbjct: 124 RGWEPGPTLGRPRGPARRPPLGG 146
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 30.4 bits (67), Expect = 1.3
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 75 RLESPALPSGGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSRPSV 134
R+ + + G PKR + RR T PG P R +R RP+
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAP 194
Query: 135 HA-PRPPS 141
A PRPP+
Sbjct: 195 SARPRPPT 202
>gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens]
Length = 758
Score = 30.4 bits (67), Expect = 1.3
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 34 RRWGKAEKRPRLADESCDYQVTWVTPNHDGLGLSARPAARRRLESPALPSGGHRRYLPKR 93
RR G+ ++R R + Q H G G +A A R++ S +P RR P +
Sbjct: 53 RRRGRRQRRHRRGLRARRPQ------RHGGSGTAAHAGAARQVASGFMPHRRRRRTAPGQ 106
Query: 94 REVCVSKRRGTQAHQPGRPQGKAERPA----RGGPRWCQSSRPSVHAPRPP 140
+R+G PG G+ A GG + P++ P PP
Sbjct: 107 PWASGFRRQGRGLSGPGAGSGRGRGGALIGRAGGGAMAAKTSPAM-LPLPP 156
Score = 28.9 bits (63), Expect = 3.7
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 78 SPALPSG--GHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGPRWCQSSRPSVH 135
SPA PS R + + RG+Q PGR +G+ +R R G R + RP H
Sbjct: 18 SPATPSAPAAQRALAEQPMSARLGPTRGSQGSAPGRRRGRRQRRHRRGLR---ARRPQRH 74
>gi|239749473 PREDICTED: hypothetical protein XP_002347063 [Homo
sapiens]
Length = 119
Score = 30.4 bits (67), Expect = 1.3
Identities = 32/101 (31%), Positives = 37/101 (36%), Gaps = 25/101 (24%)
Query: 30 KTGSRRWGK------AEKRPRLADESCDYQVTWVTPNHDGLGLSARPAARRRLESPALPS 83
+ G R W + EK PRL V PNH +GLS R S L S
Sbjct: 28 RRGGRDWARNEAGRDLEKPPRLHCSGRGRLEEPVPPNHLPVGLSVRG-------SQVLSS 80
Query: 84 GGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAERPARGGP 124
G RR R T P R + E+ ARGGP
Sbjct: 81 AGPRRC------------RLTGTRNPVRGPRRVEQIARGGP 109
>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
Length = 193
Score = 30.4 bits (67), Expect = 1.3
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 62 DGLGLSARPAARRRLESPALPS----GGHRRYLPKRREVCVSKRRGTQAHQPGRPQGKAE 117
+G ++ RP L P +P+ GG RR + RG+ GR +G+AE
Sbjct: 98 EGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAE 157
Query: 118 RPARGGPRWCQSSRPSVHAPRPP 140
PA G ++P PP
Sbjct: 158 PPALGAGACDSRNQPDSQRTAPP 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,731,132
Number of Sequences: 37866
Number of extensions: 590224
Number of successful extensions: 2155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 2102
Number of HSP's gapped (non-prelim): 127
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.