Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169210176
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
(639 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo ... 1340 0.0
gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo ... 1340 0.0
gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo ... 1340 0.0
gi|239747014 PREDICTED: similar to tektin 4 [Homo sapiens] 68 3e-11
gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens] 65 2e-10
gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens] 59 1e-08
gi|21389613 tektin 4 [Homo sapiens] 47 5e-05
gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens] 43 8e-04
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 42 0.002
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 39 0.011
gi|239752679 PREDICTED: hypothetical protein [Homo sapiens] 39 0.019
gi|239747216 PREDICTED: hypothetical protein XP_002346941 [Homo ... 39 0.019
gi|239741024 PREDICTED: hypothetical protein XP_002342070 [Homo ... 39 0.019
gi|54860105 nadrin isoform 2 [Homo sapiens] 37 0.056
gi|148806872 lupus brain antigen 1 [Homo sapiens] 37 0.056
gi|188536004 zinc finger protein 469 [Homo sapiens] 36 0.095
gi|119943102 CREB binding protein isoform b [Homo sapiens] 36 0.095
gi|119943104 CREB binding protein isoform a [Homo sapiens] 36 0.095
gi|163965366 nascent polypeptide-associated complex alpha subuni... 36 0.095
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 36 0.12
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 36 0.12
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 35 0.16
gi|41281612 zinc finger protein 828 [Homo sapiens] 35 0.16
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 35 0.21
gi|118402590 myosin XV [Homo sapiens] 35 0.28
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens] 35 0.28
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 35 0.28
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 34 0.36
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 34 0.36
gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 34 0.47
>gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 1340 bits (3468), Expect = 0.0
Identities = 639/639 (100%), Positives = 639/639 (100%)
Query: 1 MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP 60
MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP
Sbjct: 1 MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP 60
Query: 61 LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE 120
LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE
Sbjct: 61 LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE 120
Query: 121 AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR 180
AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR
Sbjct: 121 AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR 180
Query: 181 HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW 240
HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW
Sbjct: 181 HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW 240
Query: 241 EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP
Sbjct: 241 EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
Query: 301 ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL 360
ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL
Sbjct: 301 ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL 360
Query: 361 CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA 420
CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA
Sbjct: 361 CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA 420
Query: 421 AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE 480
AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE
Sbjct: 421 AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE 480
Query: 481 PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV 540
PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV
Sbjct: 481 PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV 540
Query: 541 HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE 600
HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE
Sbjct: 541 HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE 600
Query: 601 GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR 639
GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR
Sbjct: 601 GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR 639
>gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 1340 bits (3468), Expect = 0.0
Identities = 639/639 (100%), Positives = 639/639 (100%)
Query: 1 MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP 60
MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP
Sbjct: 1 MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP 60
Query: 61 LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE 120
LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE
Sbjct: 61 LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE 120
Query: 121 AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR 180
AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR
Sbjct: 121 AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR 180
Query: 181 HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW 240
HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW
Sbjct: 181 HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW 240
Query: 241 EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP
Sbjct: 241 EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
Query: 301 ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL 360
ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL
Sbjct: 301 ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL 360
Query: 361 CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA 420
CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA
Sbjct: 361 CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA 420
Query: 421 AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE 480
AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE
Sbjct: 421 AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE 480
Query: 481 PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV 540
PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV
Sbjct: 481 PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV 540
Query: 541 HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE 600
HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE
Sbjct: 541 HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE 600
Query: 601 GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR 639
GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR
Sbjct: 601 GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR 639
>gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 1340 bits (3468), Expect = 0.0
Identities = 639/639 (100%), Positives = 639/639 (100%)
Query: 1 MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP 60
MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP
Sbjct: 1 MVAQCYECARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPP 60
Query: 61 LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE 120
LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE
Sbjct: 61 LVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLE 120
Query: 121 AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR 180
AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR
Sbjct: 121 AEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR 180
Query: 181 HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW 240
HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW
Sbjct: 181 HRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNW 240
Query: 241 EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP
Sbjct: 241 EPHPALGLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
Query: 301 ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL 360
ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL
Sbjct: 301 ETQLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTL 360
Query: 361 CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA 420
CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA
Sbjct: 361 CPFRIQHDLSVKQPRRVPGSGAQGRLLIQEAELIGSIPELLERPTVQAGNRSRGSCNLRA 420
Query: 421 AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE 480
AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE
Sbjct: 421 AQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQE 480
Query: 481 PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV 540
PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV
Sbjct: 481 PGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLLV 540
Query: 541 HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE 600
HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE
Sbjct: 541 HQLGGSSSQQGEDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEE 600
Query: 601 GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR 639
GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR
Sbjct: 601 GPVGNGRVSVSRGPGSERDKAKVLCGLGLGPTENGAPAR 639
>gi|239747014 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 507
Score = 67.8 bits (164), Expect = 3e-11
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 16/124 (12%)
Query: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDCPLLRTLCP 362
+L HA D M VPFSIAT+N+Q +++ H LV D+VETELLK P Q L+ C
Sbjct: 101 RLEHALDAMEVPFSIATDNMQCNQRHQHANLVRDHVETELLKAYPPAPSQ---CLKNCCS 157
Query: 363 FR-----------IQHDLSVKQPRRVPGSGAQGRLLI--QEAELIGSIPELLERPTVQAG 409
R + L+V++ G + R L +EAELI +I ELL+R VQA
Sbjct: 158 SRKPSASNKGVCEVMETLTVQEEANPGTEGCRTRALAHKEEAELIRNIQELLKRVIVQAV 217
Query: 410 NRSR 413
++ R
Sbjct: 218 SQIR 221
Score = 37.7 bits (86), Expect = 0.033
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 445 PRLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQEPGEK 484
P+L +E+E L+ S+ L EKLL+ EQSL NLE + EK
Sbjct: 435 PKLVSELEELYKSITALWEKLLQAEQSLHNLEDIHMSLEK 474
>gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 333
Score = 65.1 bits (157), Expect = 2e-10
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQ---DC----- 354
+L HA D PFSIAT+NLQ + H L+ D+VETELLK P Q +C
Sbjct: 116 RLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRK 175
Query: 355 PLLRTLCPFRIQHDLSVKQPRRVPGSGAQGRLLI--QEAELIGSIPELLERPTVQAGNRS 412
P R P ++ L+V++ G + R L +EAELI +I ELL+R VQA ++
Sbjct: 176 PSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQI 235
Query: 413 R 413
R
Sbjct: 236 R 236
>gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 254
Score = 58.9 bits (141), Expect = 1e-08
Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 34/145 (23%)
Query: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQDC-------- 354
+L HA D PFSIAT+NLQ + + L+ D+VETELLKV GGQD
Sbjct: 100 RLEHALDATEAPFSIATDNLQCSQGHQNANLMRDHVETELLKVPAAVGGQDLWVQRGGAP 159
Query: 355 ------------------------PLLRTLCPFRIQHDLSVKQPRRVPGSGAQGRLLI-- 388
P R P ++ L+V++ G + R L
Sbjct: 160 GSSCGQATWLLQAHRRPALCASRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHK 219
Query: 389 QEAELIGSIPELLERPTVQAGNRSR 413
+EAELI +I ELL+R VQA ++ R
Sbjct: 220 KEAELIRNIQELLKRAIVQAVSQIR 244
>gi|21389613 tektin 4 [Homo sapiens]
Length = 435
Score = 47.0 bits (110), Expect = 5e-05
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLK 344
+L A D VPFSI T+NLQ E+ HP LV D+VETELLK
Sbjct: 125 RLERALDATEVPFSITTDNLQCRERREHPNLVRDHVETELLK 166
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 431 RLALRQDMDNSWGCP-----RLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQEPGEK 484
RL LR N C RL +EVE L+ SL LREKLLE EQSL NLE + EK
Sbjct: 344 RLYLRSHRPNMELCRDAAQFRLLSEVEELNMSLTALREKLLEAEQSLRNLEDIHMSLEK 402
>gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 445
Score = 43.1 bits (100), Expect = 8e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLK 344
+L A D M VPFSI T+N+Q ++ H L+ D+VETELLK
Sbjct: 131 RLERALDAMEVPFSITTDNMQCSQRHQHTNLLRDHVETELLK 172
Score = 38.9 bits (89), Expect = 0.015
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 446 RLGNEVEGLHASLVVLREKLLEVEQSLGNLEYVQEPGEK 484
RL +EVE L+ S+ LREKLL+ EQSL NL+ + EK
Sbjct: 374 RLVSEVEELYKSITALREKLLQAEQSLRNLKDIHMSLEK 412
>gi|148806908 fibronectin type III domain containing 1 [Homo
sapiens]
Length = 1894
Score = 42.0 bits (97), Expect = 0.002
Identities = 72/282 (25%), Positives = 96/282 (34%), Gaps = 70/282 (24%)
Query: 22 TLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPPLVPNQGALMDTVTLGSVRWRV 81
+L QP P P AS P A+ + S PS P N L+D+ +
Sbjct: 603 SLATQPRPGAPPSASAS-----PAHHASTQGTSHRPSLPASLNDNDLVDSDEDERAVGSL 657
Query: 82 PLSGWWTREAVPPRPVLPHSQQ-------------PGSSMRQCPRRTPGHLEAEAERSQS 128
G + + PRP L S+Q PG+ RRTP AE + S S
Sbjct: 658 HPKGAFAQ----PRPALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAEEDSSAS 713
Query: 129 -------PEFASSARVVPLVPRVCRSGDKHGQFRSAQP--------------------TG 161
P S+R++P P + K G+ P +
Sbjct: 714 APPSRLSPPHGGSSRLLPTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMSSSVSSHLSS 773
Query: 162 RCQVKAGS-----------------RQNVELGAPPRHRVARACSHLGKPSHSEAPGRSSG 204
R QV G+ RQ R R A HL + A GRS
Sbjct: 774 RTQVSEGAEASDGESHGDGDREDGGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPS 833
Query: 205 HISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPAL 246
S GR P + P ++S S VPS R VP + + HP L
Sbjct: 834 RFSIGRGPRLQP---SSSPQSTVPSRAHPR-VPSHSDSHPKL 871
Score = 31.2 bits (69), Expect = 3.1
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 398 PELLERPTVQAGNRSRGSCNLRAAQGMAPDPHPRLALRQDMDNSWGCPRLGNEVEGLHAS 457
P + P+V A + R + +L L L+ + + G PR ++ A
Sbjct: 485 PASSQHPSVPASPQGRNAKDLL------------LDLKNKILANGGAPRKP-QLRAKKAE 531
Query: 458 LVVLREKLLEVEQSLGNLEYVQEPGEKHRRQDQQPLCRPPGVHGHHAATP-RSCSCAWLP 516
+ L+ + E+ LG+ E P QDQ+ RPP HGH P R+ A +P
Sbjct: 532 ELDLQSTEITGEEELGSRE--DSPMSPSDTQDQKRTLRPPSRHGHSVVAPGRTAVRARMP 589
Query: 517 A 517
A
Sbjct: 590 A 590
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 39.3 bits (90), Expect = 0.011
Identities = 71/294 (24%), Positives = 102/294 (34%), Gaps = 43/294 (14%)
Query: 26 QPSPNRPCHRDASHTTVPPPGLATARVASALPSPPL-------VPNQGALMDTVTLGS-- 76
QP+P +P PPP + A S+ P PP P A + G+
Sbjct: 260 QPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGP 319
Query: 77 -VRWRVPLSGWWTREA--VPPRP----VLPHSQQPGSSMRQCPRRTPGHLEAEAERSQSP 129
+ P + + A +PP+P P +QQP P+ PGHL QS
Sbjct: 320 GGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSE 379
Query: 130 EFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPRHRVARACSH 189
V L P G +A P + G+ QN A+
Sbjct: 380 YL--QQHVAGLQPPSPAQPSSTG--AAASPATAATLPVGTGQNASSVG------AQLMGA 429
Query: 190 LGKPSHSEAP---GRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPAL 246
+PS + AP G ++P + +PP AT GG + P G P P +
Sbjct: 430 SSQPSEAMAPRTGPAQGGQVAPCQPTGVPP---ATVGGVVQPCLGPAGAGQPQSVPPPQM 486
Query: 247 GLSGWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSCATWP 300
G SG P P P + + A + PAP ++P V + T P
Sbjct: 487 GGSG---PLSAVPGGPHAVVPGVPNVPAAV-------PAP-SVPSVSTTSVTMP 529
>gi|239752679 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 38.5 bits (88), Expect = 0.019
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 552 EDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEEGPVG 604
++G RGP G G +G RA + G G SC H GRLV GPVG
Sbjct: 101 QEGLLLRGPTGHRGGRGRGRRGEGRAGFGSSWGLGQSCLGHEGGRLV-PGPVG 152
>gi|239747216 PREDICTED: hypothetical protein XP_002346941 [Homo
sapiens]
Length = 245
Score = 38.5 bits (88), Expect = 0.019
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 552 EDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEEGPVG 604
++G RGP G G +G RA + G G SC H GRLV GPVG
Sbjct: 101 QEGLLLRGPTGHRGGRGRGRRGEGRAGFGSSWGLGQSCLGHEGGRLV-PGPVG 152
>gi|239741024 PREDICTED: hypothetical protein XP_002342070 [Homo
sapiens]
Length = 245
Score = 38.5 bits (88), Expect = 0.019
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 552 EDGCPQRGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLVEEGPVG 604
++G RGP G G +G RA + G G SC H GRLV GPVG
Sbjct: 101 QEGLLLRGPTGHRGGRGRGRRGEGRAGFGSSWGLGQSCLGHEGGRLV-PGPVG 152
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 37.0 bits (84), Expect = 0.056
Identities = 63/268 (23%), Positives = 89/268 (33%), Gaps = 59/268 (22%)
Query: 23 LVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPPLVPNQGALMDTVTLGSVRWRVP 82
LV++ SP +P +D VP PG +++AS P L ++G
Sbjct: 492 LVKKESPPKP--KDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQL----SMGQPHNAAG 545
Query: 83 LSGWWTREAVP-PRPVLPHSQQPGSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPLV 141
S R AV P P P P PGH ++ S
Sbjct: 546 PSPHTLRRAVKKPAPAPPKPGNP----------PPGHPGGQSSSGTS------------- 582
Query: 142 PRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPRHRVARACSHLGKPSHSEAPGR 201
+H S +P R +PP + PS AP R
Sbjct: 583 --------QHPPSLSPKPPTRSP------------SPPTQHTGQPPGQPSAPSQLSAPRR 622
Query: 202 SSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPALGLSGWSFPTDLAGLT 261
S +SP + P+ PP + T L+ + + P GL S T T
Sbjct: 623 YSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSH-TPPQTPT 681
Query: 262 PPLTPPALVDTMAQMDTLLTKQPAPQTI 289
PP TPP + + + L PAPQT+
Sbjct: 682 PPSTPP-----LGKQNPSL---PAPQTL 701
>gi|148806872 lupus brain antigen 1 [Homo sapiens]
Length = 2375
Score = 37.0 bits (84), Expect = 0.056
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 186 ACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPA 245
+ +HLGK S S APG +S S G F +P GAT+ +P VP +WE P
Sbjct: 66 SAAHLGKLSKSTAPGHTSQLKSQGSFKSVP--CGATA--RTLPEGS---AVPDSWETLPG 118
Query: 246 LGLSGWSFPTDLAGLTP-PLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSC 296
T + P L P +L D + Q T+L +Q + P P+ C
Sbjct: 119 ---------TQVTRKEPGALRPCSLRDCLMQDITVLIQQ--VEVDPSFPEDC 159
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 36.2 bits (82), Expect = 0.095
Identities = 70/293 (23%), Positives = 102/293 (34%), Gaps = 57/293 (19%)
Query: 29 PNRPCHRDASHTTVPPPGLATARVA-----------SALPSPPLVPNQGA----LMDTVT 73
P R C ++H PPP L+ A AL P + G+ L +
Sbjct: 3509 PIRGCELPSNHQECPPPSLSPFPAALADGRGDCALDGALERPENEASPGSPGPLLQQALP 3568
Query: 74 LGSVRWRVPLSGWWTREAVPPRPVLPHS---QQPGSSMRQCPRRTPGHLEAEAERSQSPE 130
LG+ +P G ++A R L S + PG+ R P H + + + E
Sbjct: 3569 LGA---SLPRPGARGQDAEGKRAPLVFSGKRRAPGAR----GRCAPDHFQEDHLLQKEKE 3621
Query: 131 FASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPRHRVARACSHL 190
+SS V G G F T ++ S+ P + + H
Sbjct: 3622 VSSSHMV--------SEGGPRGTFHKGSATKPAGCQSSSKDRSAASTP--SKALKFPVHP 3671
Query: 191 GKPSHSEAPGRSSGHISPGRFPDIPPLK-GATSGGSLVPSNGGRRCVPGNWEPHPALGLS 249
K S APG + G P P K G +S GS P G + G +P PA G
Sbjct: 3672 RKAVGSLAPGELARGTENGMKPATPKAKPGPSSQGSGSPRPGTK--TGGGSQPQPASG-- 3727
Query: 250 GWSFPTDLAGLTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQ--SCATWP 300
++ A T P P + ++ PAP+ +P Q SC P
Sbjct: 3728 --QLQSETA--TTPAKP-----------SFPSRSPAPERLPARAQAKSCTKGP 3765
Score = 30.8 bits (68), Expect = 4.0
Identities = 57/223 (25%), Positives = 74/223 (33%), Gaps = 53/223 (23%)
Query: 85 GWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLEAEAERS---QSPEFASSARVVPLV 141
G W EAV P P QP S C + PG L ++ S SP A SA
Sbjct: 311 GAWPEEAVGTGPAYPLPTQPAPSPLPCYQGQPGGLNRHSDLSGALSSPGAAHSA------ 364
Query: 142 PRVCRSGDKHGQFRSAQP--TGRCQVKAGSRQNVELGAPPRHRVARACSHLGKPSHSEAP 199
PR S H P Q GS + P RH +A G + +P
Sbjct: 365 PRPF-SDSLHKSLTKILPERPPSAQDGLGSTRGPPSSLPQRHFPGQAYRASGVDT---SP 420
Query: 200 GRSSGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPALGLSGWSFPTDLAG 259
G ++ P PP + +P W+P A +P
Sbjct: 421 GPPDTELAA---PGPPPAR-----------------LPQLWDPTAA------PYP----- 449
Query: 260 LTPPLTPPALVDTMAQMDTLLTKQPAPQTIPVVPQSC-ATWPE 301
TPP P A +M QP+P +PQS WP+
Sbjct: 450 -TPPGGPLAATRSM-----FFNGQPSPGQRLCLPQSAPLPWPQ 486
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 36.2 bits (82), Expect = 0.095
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 53 ASALPSPPLVPNQGALMDTVTLGSVRWRVPLSGWWTREAV-PPRPVLP-HSQQPGSSMRQ 110
AS LP PP+ Q L T S +P T + PP+P P P SS Q
Sbjct: 802 ASQLPCPPVT--QSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQ 859
Query: 111 CPRRTPGHLEAEAERSQSP--EFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAG 168
P TPG + + + +P + A+ A+V P P+ QP ++
Sbjct: 860 TPTPTPGSVPSATQTQSTPTVQAAAQAQVTP-QPQT-----------PVQPPSVATPQSS 907
Query: 169 SRQNVELGA-PPRHRVARACSHLGK--PSHSEAPGRSSGHISPGRFPDIPPLKGAT 221
+Q + A PP +++A + + P+ S + PG PD+P L+ T
Sbjct: 908 QQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAETNSQQPG--PDVPVLEMKT 961
Score = 32.7 bits (73), Expect = 1.1
Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 18/197 (9%)
Query: 109 RQCPRRTPGHLEAEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAG 168
++ + L + P + P++P+ +G + P R QV G
Sbjct: 625 KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPNGPL--SLPVNRMQVSQG 682
Query: 169 -------SRQNVELG-APPRHRVARACSH-LGKPSHSEAPGRSSGHISPGRFPDIPPLKG 219
S NV+L AP R A +H + S PG + ISP R P P + G
Sbjct: 683 MNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSMGSVPGMA---ISPSRMPQPPNMMG 739
Query: 220 ATSGGSLVPSNGGRRCVPGNWEPHPALGLS-GWSFPTDLAGLTPPLTPPALVDTMAQMDT 278
A + + + + +P N P + +S G P G++ P A + M
Sbjct: 740 AHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNM-- 797
Query: 279 LLTKQPAPQTIPVVPQS 295
L Q + P V QS
Sbjct: 798 -LGPQASQLPCPPVTQS 813
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 36.2 bits (82), Expect = 0.095
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 53 ASALPSPPLVPNQGALMDTVTLGSVRWRVPLSGWWTREAV-PPRPVLP-HSQQPGSSMRQ 110
AS LP PP+ Q L T S +P T + PP+P P P SS Q
Sbjct: 840 ASQLPCPPVT--QSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQ 897
Query: 111 CPRRTPGHLEAEAERSQSP--EFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAG 168
P TPG + + + +P + A+ A+V P P+ QP ++
Sbjct: 898 TPTPTPGSVPSATQTQSTPTVQAAAQAQVTP-QPQT-----------PVQPPSVATPQSS 945
Query: 169 SRQNVELGA-PPRHRVARACSHLGK--PSHSEAPGRSSGHISPGRFPDIPPLKGAT 221
+Q + A PP +++A + + P+ S + PG PD+P L+ T
Sbjct: 946 QQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAETNSQQPG--PDVPVLEMKT 999
Score = 32.7 bits (73), Expect = 1.1
Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 18/197 (9%)
Query: 109 RQCPRRTPGHLEAEAERSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAG 168
++ + L + P + P++P+ +G + P R QV G
Sbjct: 663 KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPNGPL--SLPVNRMQVSQG 720
Query: 169 -------SRQNVELG-APPRHRVARACSH-LGKPSHSEAPGRSSGHISPGRFPDIPPLKG 219
S NV+L AP R A +H + S PG + ISP R P P + G
Sbjct: 721 MNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSMGSVPGMA---ISPSRMPQPPNMMG 777
Query: 220 ATSGGSLVPSNGGRRCVPGNWEPHPALGLS-GWSFPTDLAGLTPPLTPPALVDTMAQMDT 278
A + + + + +P N P + +S G P G++ P A + M
Sbjct: 778 AHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNM-- 835
Query: 279 LLTKQPAPQTIPVVPQS 295
L Q + P V QS
Sbjct: 836 -LGPQASQLPCPPVTQS 851
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.2 bits (82), Expect = 0.095
Identities = 67/293 (22%), Positives = 92/293 (31%), Gaps = 42/293 (14%)
Query: 41 TVPPPGLATARVAS--------ALPSPPLVPNQGALMDTVTLGSVRWRVPLSGWWTREAV 92
T PP G T A+ A P P P A G + P T A
Sbjct: 1142 TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1201
Query: 93 PPRPVLPHSQQPGSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPLVPRVCRSGDKHG 152
PP P G P+ P A + S + P P K G
Sbjct: 1202 PPSP-------KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254
Query: 153 QFRSAQPTGRCQVKAGSRQNVELG-APPRHRVARACSHLGKPSHSEAPGRS--------- 202
+ P G A + +++ G A P H+ A + + PS P S
Sbjct: 1255 P-ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 203 -SGHISPGRFPDIPPLKGATSGGSLV-PSNGGRRCVPGNWEPHPALGLSGWSFPTDLAGL 260
+ SP P PP KGA + ++ PS G +P G + P+ G
Sbjct: 1314 AATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPAT----TPSSKGGPTTPSSKEGP 1369
Query: 261 TPPLTPPALVDTMAQMDTLLTKQPA----------PQTIPVVPQSCATWPETQ 303
TPP P+ A + PA P IP+ P+ P T+
Sbjct: 1370 TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTR 1422
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 35.8 bits (81), Expect = 0.12
Identities = 53/212 (25%), Positives = 73/212 (34%), Gaps = 22/212 (10%)
Query: 45 PGLATARVASALPSPPLVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQP 104
PG RV++ P+PP P G G R P +G V P P+ +
Sbjct: 57 PGSPLYRVSAPPPAPPPPPPPG--------GPSRSERPRAGLRPGAFVSPGPLGRRASCS 108
Query: 105 GSSMRQCPRRTPGHLEAEAERSQSPEFASSARV-VPLVPRVCRSGDKHGQFRSAQPTGRC 163
G + + G L A + + AR VP R G A P GR
Sbjct: 109 GRA------GSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPP--RASPGGRP 160
Query: 164 QVKAGSRQNVELGAP-PRHRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATS 222
+A R E P H S +G SE + H +P R P P + G T
Sbjct: 161 GSEARGRSGAECARRVPLHHGPPGASGVG----SERDRKFQLHQTPARGPPFPGISGMTR 216
Query: 223 GGSLVPSNGGRRCVPGNWEPHPALGLSGWSFP 254
G ++ + P P +LG +G P
Sbjct: 217 GPVVLSGVNRQHRWPPGASPSRSLGEAGGERP 248
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 35.8 bits (81), Expect = 0.12
Identities = 53/212 (25%), Positives = 73/212 (34%), Gaps = 22/212 (10%)
Query: 45 PGLATARVASALPSPPLVPNQGALMDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQP 104
PG RV++ P+PP P G G R P +G V P P+ +
Sbjct: 57 PGSPLYRVSAPPPAPPPPPPPG--------GPSRSERPRAGLRPGAFVSPGPLGRRASCS 108
Query: 105 GSSMRQCPRRTPGHLEAEAERSQSPEFASSARV-VPLVPRVCRSGDKHGQFRSAQPTGRC 163
G + + G L A + + AR VP R G A P GR
Sbjct: 109 GRA------GSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPP--RASPGGRP 160
Query: 164 QVKAGSRQNVELGAP-PRHRVARACSHLGKPSHSEAPGRSSGHISPGRFPDIPPLKGATS 222
+A R E P H S +G SE + H +P R P P + G T
Sbjct: 161 GSEARGRSGAECARRVPLHHGPPGASGVG----SERDRKFQLHQTPARGPPFPGISGMTR 216
Query: 223 GGSLVPSNGGRRCVPGNWEPHPALGLSGWSFP 254
G ++ + P P +LG +G P
Sbjct: 217 GPVVLSGVNRQHRWPPGASPSRSLGEAGGERP 248
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 35.4 bits (80), Expect = 0.16
Identities = 49/170 (28%), Positives = 64/170 (37%), Gaps = 29/170 (17%)
Query: 155 RSAQPTGR---CQVKAGSRQNVEL-GAPPRHRVARACSHLGKPSHSEAPGRSSGHISPGR 210
R AQP G QV R+ L G PPR R R + G P+ SEAPG
Sbjct: 102 RLAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPA-SEAPGLR-------- 152
Query: 211 FPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPALGL--SGWSFPTDLAGLTPPLTPPA 268
PD S + + +P P PA GL +G + L PP+ P
Sbjct: 153 -PD--------SARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLRPLLLQPPPMLSPG 203
Query: 269 L-----VDTMAQMDTLLTKQPAPQTIPVVPQSCATWPETQLCHASDTMTV 313
L V+ A+ +L PAP P P + T H T+T+
Sbjct: 204 LAQSPGVELHARTLSLPAPSPAPCLPPPAPPAARTPSAHSPAHTHFTLTL 253
Score = 30.4 bits (67), Expect = 5.2
Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 9/129 (6%)
Query: 28 SPNRPCHRDASHTTVPPPGLATARVASALPSPPLVPNQGALMDTVTLGSVRW-----RVP 82
+P R H PP LA A A +P L P+ + L S R P
Sbjct: 118 APRRRAHLTGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAP 177
Query: 83 LSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPLVP 142
+G W RP+L QP + ++PG +E A P + + + P P
Sbjct: 178 AAGLWRAGCTRLRPLL---LQPPPMLSPGLAQSPG-VELHARTLSLPAPSPAPCLPPPAP 233
Query: 143 RVCRSGDKH 151
R+ H
Sbjct: 234 PAARTPSAH 242
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 35.4 bits (80), Expect = 0.16
Identities = 49/184 (26%), Positives = 70/184 (38%), Gaps = 32/184 (17%)
Query: 93 PPRPVLPHSQQP-GSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPLVPRVCRSGDKH 151
P PVL S +P G S P ++ R+ SPE P P S +
Sbjct: 245 PESPVLAASPEPWGPSPAASPE------SRKSARTTSPE--------PRKPSPSESPEPW 290
Query: 152 GQFRSAQPTGRCQVKAGSRQNVELGAP--PRHRVARACSHLG-----KPSHSEAPG--RS 202
F + P R A S + + G P PR + + G KP+ S +PG +
Sbjct: 291 KPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKP 350
Query: 203 SGHISPGRFPDIPPLKGATSGGSLVPSNGGRRCVPGNWEPHPALGLSGWSFPTDLAGLTP 262
+SPG + P + A+ S V P +W+ PA S S P +L P
Sbjct: 351 IPSVSPGPWKPTPSVSSASWKSSSVS--------PSSWKSPPASPESWKSGPPELRKTAP 402
Query: 263 PLTP 266
L+P
Sbjct: 403 TLSP 406
Score = 32.3 bits (72), Expect = 1.4
Identities = 60/258 (23%), Positives = 90/258 (34%), Gaps = 54/258 (20%)
Query: 32 PCHRDASHTTVPPPGLATARVASAL----PSP-PLVPNQGALMDTVTLGSVRWRVPLSGW 86
PC+ A ++P + T ++ S L P P PL P + +V ++ +P
Sbjct: 118 PCN-SAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLP---- 172
Query: 87 WTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPLVPRVCR 146
P +P S +P S+ C + + SPE A V P +
Sbjct: 173 ---SPEPSKPASVSSPEPPKSVPVCESQKLAPVP-------SPEPQKPAPVSPESVKATL 222
Query: 147 SGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPR------------HRVARACS-HLGKP 193
S K Q +S P A S ++ L A P + AR S KP
Sbjct: 223 SNPKP-QKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKP 281
Query: 194 SHSEAPG-------------RSSGHISPGRFPDIPP-------LKGATSGGSLVPSNGGR 233
S SE+P R + +SPG + PP + S G P+
Sbjct: 282 SPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAP 341
Query: 234 RCVPGNWEPHPALGLSGW 251
PG W+P P++ W
Sbjct: 342 SVSPGPWKPIPSVSPGPW 359
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 35.0 bits (79), Expect = 0.21
Identities = 61/240 (25%), Positives = 77/240 (32%), Gaps = 52/240 (21%)
Query: 26 QPSPNRPCHRDASHTTVPPPGLATARV---ASALPSPPLVPNQGALMDTVTLGSVRWRVP 82
+P RP + T PPPG R + PP P + P
Sbjct: 35 KPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPE------------GPP 82
Query: 83 LSGWWTREAVPPRPVLPHSQQP-GSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPLV 141
G + PPRP P Q P G + Q P PG E P+ + ++ P
Sbjct: 83 PQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPE-----GPPPQGGNQSQGPPPR 137
Query: 142 PRVCRSGDKHGQFRSAQP---TGRCQVKAGSRQNVELGAPPRHRVARACSHLGKPSHSEA 198
P G +S P G+ + N G PP H GKP E
Sbjct: 138 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP---------HPGKP---EG 185
Query: 199 PGRSSGHIS------PGRFPDIPPLKGATSGG--------SLVPSNGGRRCVPGNWEPHP 244
P G+ S PG+ PP G S G PS GG + P PHP
Sbjct: 186 PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNK--PQGPPPHP 243
Score = 33.9 bits (76), Expect = 0.47
Identities = 44/169 (26%), Positives = 56/169 (33%), Gaps = 14/169 (8%)
Query: 82 PLSGWWTREAVPPRPVLPHSQQP-GSSMRQCPRRTPGHLEAEAERSQSPEFASSARVVPL 140
P G + PPRP P P G + Q P PG E P+ + ++ P
Sbjct: 145 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPP-----PQGGNQSQGPPP 199
Query: 141 VPRVCRSGDKHGQFRSAQPT---GRCQVKAGSRQNVELGAPPRHRVARAC--SHLGKPSH 195
P G +S P G+ + N G PP + KP
Sbjct: 200 RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQR 259
Query: 196 SEAPGRSSGHISPGRFPD--IPPLKGATSGGSLVPSNGGRRCVPGNWEP 242
PGR G PG P +PP G G P GGR P +P
Sbjct: 260 PPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPP-PPPQGGRPHRPPQGQP 307
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 34.7 bits (78), Expect = 0.28
Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 39/195 (20%)
Query: 23 LVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPPLVPNQGALMDTVTLGSVRWRVP 82
++R+ P DA P P T SAL SPP+ P R P
Sbjct: 627 VLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSPPVPP----------------RPP 670
Query: 83 LSGWWTREAVPPRPV-------LPHSQQPGSSMRQCPR--RTPGHLEAEAERSQSPEFAS 133
SG PP P LP P S+R+ P P H+ A ++ F
Sbjct: 671 SSG------PPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHV-PPAPQASWWAFVE 723
Query: 134 SARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPRHRVARACSHLGKP 193
V P VP + F +P+ R + G+ GA PR RA S L P
Sbjct: 724 PPAVSPEVPPDLLA------FPGPRPSFRGSRRRGAAFGFP-GASPRASRRRAWSPLASP 776
Query: 194 SHSEAPGRSSGHISP 208
S G+ SP
Sbjct: 777 QPSLRSSPGLGYCSP 791
>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
Length = 1142
Score = 34.7 bits (78), Expect = 0.28
Identities = 34/102 (33%), Positives = 38/102 (37%), Gaps = 22/102 (21%)
Query: 541 HQLGGSSSQQGEDGCPQR--GPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLV 598
H + G +GE G P GP GL G KGE PP + GEPG
Sbjct: 548 HGIPGKQGIKGEKGDPGGIIGPPGLPGP--KGEAGPPGKSLPGEPGLD------------ 593
Query: 599 EEGPVGNGRVSVSRGPGSERDKAKVLCGLG-LGPTENGAPAR 639
GN RGP ER V G +GP G P R
Sbjct: 594 -----GNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGR 630
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 34.7 bits (78), Expect = 0.28
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 484 KHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFI-SFETGHSLCPELLPLLVHQ 542
K R+ Q L RPP G A C P P+ +++ G S P P
Sbjct: 524 KPERKQQPQLPRPPTTGGSEGAGAAPCP----PNPANSWVPGLSPGGSRRPPRSP--ERT 577
Query: 543 LGGSSSQQGEDGCPQRGPLGLVG-AAAKGELSPP---RATWRGEPGTGYS 588
L SS + G P P GL G A+ G+ PP R T PG S
Sbjct: 578 LSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVS 627
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 34.3 bits (77), Expect = 0.36
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 540 VHQLGGSSSQQGEDGCPQ-RGPLGLVGAAAKGELSPPRATWRGEPGTGYSCTSHNRGRLV 598
+ L G+ ++GEDG P +G +G+ G +GE+ PP RGE G
Sbjct: 800 IRGLKGTKGEKGEDGFPGFKGDMGIKG--DRGEIGPPGP--RGEDG-------------- 841
Query: 599 EEGPVGNGRVSVSRGP-GSERDKAKV 623
EGP G G + GP G +K K+
Sbjct: 842 PEGPKGRGGPNGDPGPLGPPGEKGKL 867
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 34.3 bits (77), Expect = 0.36
Identities = 44/212 (20%), Positives = 73/212 (34%), Gaps = 27/212 (12%)
Query: 16 RFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASAL-------PSPPLVPNQGAL 68
R + ++T +P+P P + T P P T + + + P PP + G
Sbjct: 121 RMSTLQTAETKPTPTCPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGP 180
Query: 69 MDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSSMRQCPRRTPGHLEAEAERSQS 128
T SV + A P + + G ++ PG + + A R+++
Sbjct: 181 ESAPTPASVLPELRRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPS-ASRARA 239
Query: 129 PEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVELGAPPRHRVARACS 188
P+ + R P + H R G +L APPR +
Sbjct: 240 PDTKAGTRARDPAPGASQLRAAHSPHRGG----------GGAPRTQLAAPPRPPL----- 284
Query: 189 HLGKPSHSEAPGRSSGHISPGRFPDIPPLKGA 220
P + A G +S S P PPL+G+
Sbjct: 285 ----PQENAAAGLASCSASCAAVPPPPPLRGS 312
>gi|239742580 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 897
Score = 33.9 bits (76), Expect = 0.47
Identities = 69/301 (22%), Positives = 107/301 (35%), Gaps = 50/301 (16%)
Query: 9 ARRHHTARFTAVKTLVRQPSPNRPCHRDASHTTVPPPGLATARVASALPSPPLVPNQGAL 68
A H+ V +L+ P+ RDA P A A A+ALP L P G+L
Sbjct: 564 ATSSHSRDSAQVTSLI--PATFTAASRDAGMRRTRPGTSAPAAAAAALPPSTLNPTSGSL 621
Query: 69 MDTVTLGSVRWRVPLSGWWTREAVPPRPVLPHSQQPGSS-MRQCPRR---TPGHLEAEAE 124
++ V G + T A R + ++Q+ +S R C +R + H E
Sbjct: 622 LNAVDGGPSHFLASA----TAAARAQRSEVRYNQRSQTSRTRSCLKRNASSSSHSSTEGL 677
Query: 125 RSQSPEFASSARVVPLVPRVCRSGDKHGQFRSAQPTGRCQVKAGSRQNVEL---GAPPRH 181
+ ++ L + + G ++ RC+ KAG+ L G PR
Sbjct: 678 QELKRRRGPASSHCQLAHSSSNTVSEDGP-QAVSSGHRCENKAGTAPGQTLAPRGGYPRS 736
Query: 182 RVAR----ACSHL----------GKPSH---SEAPGRSSG-HISPGRFPD---------- 213
+ +R + H+ +PSH S A G S G +S D
Sbjct: 737 QASRPRINSALHVEDKAISDCRPSRPSHTLSSLATGASGGPPVSKAPTMDAQQDRPKSQD 796
Query: 214 ----IPPLKGATSGGSLVPSNGGRRCVPG----NWEPHPALGLSGWSFPTDLAGLTPPLT 265
+ PL A S P +G + PG + +P PA D + + P T
Sbjct: 797 CLGLLAPLASAAEVSSTAPVSGKKHRPPGPLFSSSDPLPATSSHSGDSAQDTSLIPAPFT 856
Query: 266 P 266
P
Sbjct: 857 P 857
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,777,741
Number of Sequences: 37866
Number of extensions: 1917388
Number of successful extensions: 6911
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 6656
Number of HSP's gapped (non-prelim): 425
length of query: 639
length of database: 18,247,518
effective HSP length: 109
effective length of query: 530
effective length of database: 14,120,124
effective search space: 7483665720
effective search space used: 7483665720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.