LOC401180 31872

Name: LOC401180	Sequence: fasta or formatted (319aa)		NCBI GI: 51464815
Description: PREDICTED: similar to hCG1745223		Not currently referenced in the text
Other entries for this name: alt prot {320aa} PREDICTED: similar to hCG1745223 alt prot {320aa} PREDICTED: similar to hCG1745223
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 38 3 C cysteine 1.9 6 1 D aspartate 2.5 8 1 E glutamate 3.8 12 2 F phenylalanine 0.6 2 1 G glycine 9.4 30 4 H histidine 1.3 4 1 I isoleucine 2.2 7 1 K lysine 5.6 18 4 L leucine 8.2 26 2 M methionine 1.9 6 1 N asparagine 0.9 3 1 P proline 15.7 50 5 Q glutamine 4.7 15 1 R arginine 8.8 28 2 S serine 9.7 31 3 T threonine 6.0 19 2 V valine 4.1 13 1 W tryptophan 0.6 2 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1745223 LOC401180 0.992 PREDICTED: similar to hCG1745223 LOC401180 0.992 PREDICTED: similar to hCG1745223 NACA 0.064 nascent polypeptide-associated complex alpha subuni... WIPF2 0.051 WIRE protein WIPF1 0.051 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.051 WAS/WASL interacting protein family, member 1 MUPCDH 0.050 mucin and cadherin-like isoform 1 SMTN 0.046 smoothelin isoform a CASKIN1 0.046 CASK interacting protein 1 DIAPH1 0.043 diaphanous 1 isoform 2 DIAPH1 0.043 diaphanous 1 isoform 1 PRB1 0.042 proline-rich protein BstNI subfamily 1 isoform 1 pre... SRRM1 0.042 serine/arginine repetitive matrix 1 TTBK1 0.040 tau tubulin kinase 1 PCLO 0.040 piccolo isoform 2 PCLO 0.040 piccolo isoform 1 PRB2 0.040 proline-rich protein BstNI subfamily 2 BCL9L 0.040 B-cell CLL/lymphoma 9-like SMTN 0.040 smoothelin isoform b SMTN 0.040 smoothelin isoform c FLJ22184 0.040 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.040 PREDICTED: hypothetical protein FLJ22184 LOC643355 0.038 PREDICTED: hypothetical protein FLJ22184 0.038 PREDICTED: hypothetical protein LOC80164 LOC643355 0.038 PREDICTED: hypothetical protein LOC100293375 0.038 PREDICTED: hypothetical protein TAF4 0.038 TBP-associated factor 4 FMN2 0.037 formin 2 APC2 0.037 adenomatosis polyposis coli 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.