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Search of human proteins with 169206080
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 417 e-117
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 417 e-117
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 416 e-117
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 55 5e-08
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 54 9e-08
gi|154146199 sal-like 3 [Homo sapiens] 50 1e-06
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 50 2e-06
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 49 3e-06
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 48 6e-06
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 47 1e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 47 1e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 1e-05
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 47 1e-05
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 46 2e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 46 2e-05
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 46 2e-05
gi|19924103 synapsin II isoform IIa [Homo sapiens] 46 2e-05
gi|19924101 synapsin II isoform IIb [Homo sapiens] 46 2e-05
gi|122937321 UNC homeobox [Homo sapiens] 46 2e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 45 3e-05
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 45 3e-05
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ... 45 3e-05
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 45 3e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 45 3e-05
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 417 bits (1072), Expect = e-117
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV 60
MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV
Sbjct: 1 MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV 60
Query: 61 KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS
Sbjct: 61 KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
Query: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR
Sbjct: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
Query: 181 RRRPRAAAALTGRTHQRSRSAF 202
RRRPRAAAALTGRTHQRSRSAF
Sbjct: 181 RRRPRAAAALTGRTHQRSRSAF 202
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 417 bits (1072), Expect = e-117
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV 60
MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV
Sbjct: 1 MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV 60
Query: 61 KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS
Sbjct: 61 KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
Query: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR
Sbjct: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
Query: 181 RRRPRAAAALTGRTHQRSRSAF 202
RRRPRAAAALTGRTHQRSRSAF
Sbjct: 181 RRRPRAAAALTGRTHQRSRSAF 202
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 416 bits (1069), Expect = e-117
Identities = 201/202 (99%), Positives = 202/202 (100%)
Query: 1 MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV 60
MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV
Sbjct: 1 MEAQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAV 60
Query: 61 KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS
Sbjct: 61 KRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
Query: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
APPAAAPAAPAQPPAPRPESQLSDRPQSWEQ+PRGPGRSARSAGAAAPPAGGLAQARQAR
Sbjct: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQRPRGPGRSARSAGAAAPPAGGLAQARQAR 180
Query: 181 RRRPRAAAALTGRTHQRSRSAF 202
RRRPRAAAALTGRTHQRSRSAF
Sbjct: 181 RRRPRAAAALTGRTHQRSRSAF 202
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 54.7 bits (130), Expect = 5e-08
Identities = 46/167 (27%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Query: 16 CWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKR--RSGGFKSHSAT 73
C R S + +G + G P R+ GGRP + A +R R+ G + S +
Sbjct: 10 CGEEPRSGSRRLPKAEGDKSGSAGAPSKNSSRL--GGRPCMCTAGRRPNRASGRRRRSCS 67
Query: 74 ERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQP 133
L CY + P P R G+P + P P P PA
Sbjct: 68 PAPTWPPLC--CYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGPALR 125
Query: 134 PAPRPESQLSDRPQSWEQKPRGP------GRSARSAGAAAPPAGGLA 174
P PRP + + P S + + R P GR R AGA P G A
Sbjct: 126 PTPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAA 172
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 53.9 bits (128), Expect = 9e-08
Identities = 44/117 (37%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
L RA R PP R PAP A PRRP+G A +PPA P PA AP
Sbjct: 143 LRRAGRRRARPPPVPRLPAPRA------PRRPRGPATPDPSPPAGRPHGPAGRAAP---- 192
Query: 141 QLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
RP Q R PGR R P GG Q ++ R R A AL H R
Sbjct: 193 --GRRPGCTAQL-RAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHLR 246
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 50.1 bits (118), Expect = 1e-06
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 88 RRLPPRPTRSPAPLARRPGKPPRRPKGAAGHP---SAPPAAAPAAPAQPPAPRPESQLSD 144
+R PPRP+ SPA PG P + G A P AP AA + PA +Q
Sbjct: 234 QRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLS 293
Query: 145 RPQSWEQKPRGPGR-SARSAGAAAPPAGGLAQA---RQARRRRPRAAA 188
RP+S P GP SA +A +AAP A A + A +P++A+
Sbjct: 294 RPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSAS 341
Score = 43.9 bits (102), Expect = 9e-05
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 99 APLARRPGKPPRRPKGAAGHPSAP--------PAAAPAAPAQPPAPRPESQLSDRPQSWE 150
AP A +P RP+ A P P P+AAPA A PAP P+S S +PQS
Sbjct: 282 APAAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSAS 341
Query: 151 QKPR-GPGRSARSAGAAAPP 169
P PG +A P
Sbjct: 342 TPPALAPGSLLGAAPGLPSP 361
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 49.7 bits (117), Expect = 2e-06
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 90 LPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAP----PAAAPAAPAQPPAPRPESQLSDR 145
LP RP+R+P+ R PG P + P+ P A P P +PP PRP + R
Sbjct: 1059 LPIRPSRAPS---RTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAP-PTR 1114
Query: 146 PQSWEQKPRGPGRSARS--AGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQRS 198
P ++ P GRS S AG A P G + AR PRA ++H R+
Sbjct: 1115 PAPPQRPPPPSGRSQPSPQAGLAGPGPAGYSTARPT--IPPRAGVISAPQSHARA 1167
Score = 40.8 bits (94), Expect = 8e-04
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 87 ARRLPPRPTRSPA-PLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDR 145
A+ P P + PA PL + PPR P APP PA P +PP P SQ S
Sbjct: 1083 AQPATPLPQKDPAQPLEPKRPPPPR--------PVAPPTR-PAPPQRPPPPSGRSQPS-- 1131
Query: 146 PQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQRS 198
PQ+ P G S +A PP G+ A Q+ R +A LT + ++
Sbjct: 1132 PQAGLAGPGPAGYS--TARPTIPPRAGVISAPQSHAR--ASAGRLTPESQSKT 1180
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 48.9 bits (115), Expect = 3e-06
Identities = 43/101 (42%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 79 SRLARACYARRLPPRPTR-SPAPLARRPGKPPRRPKGAAG-HPSAPPAAAPAAPAQPPAP 136
S L A R P P SP PL RP PP RP +G H P +A AAP +PP
Sbjct: 94 SPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAP-RPPLA 152
Query: 137 RPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQAR 177
RP Q S + EQ+P RS R AG AP A G A R
Sbjct: 153 RPLPQGSVTAREQEQRP----RSRRRAG--APEALGPALTR 187
Score = 42.0 bits (97), Expect = 4e-04
Identities = 43/131 (32%), Positives = 51/131 (38%), Gaps = 25/131 (19%)
Query: 74 ERVERSRLAR--ACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAP-PAAAPAAP 130
ER +RL+ A RR P P P P +P+GA P+AP P PA P
Sbjct: 62 ERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARP 121
Query: 131 AQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190
+ PP PRP P GP R A A P LA RP ++
Sbjct: 122 SSPP-PRP------------SLPSGPHRPVLPPSALAAPRPPLA--------RPLPQGSV 160
Query: 191 TGR-THQRSRS 200
T R QR RS
Sbjct: 161 TAREQEQRPRS 171
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 48.9 bits (115), Expect = 3e-06
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 91 PPRPTRSPAPLARRPGKPPRRPKGA------AGHPSAPPAAAPAAPAQPPAPRPESQLSD 144
PP P++ P+ + G P P G + P PP A + QP P ++ +
Sbjct: 484 PPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTP 543
Query: 145 RPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQ 196
+P + + P G G S ++ A P+GG AQ + +P + T +HQ
Sbjct: 544 KPGTSQPMPPGVGTS--TSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQ 593
Score = 41.2 bits (95), Expect = 6e-04
Identities = 29/121 (23%), Positives = 41/121 (33%), Gaps = 15/121 (12%)
Query: 91 PPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAP----AQPPAP---------- 136
PP T P + PG PP + P+ P P +QP P
Sbjct: 504 PPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQP 563
Query: 137 -RPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTH 195
P + P+ +P P ++ A P GG AQ +A +P T +H
Sbjct: 564 ATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSH 623
Query: 196 Q 196
Q
Sbjct: 624 Q 624
Score = 31.2 bits (69), Expect = 0.63
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 8/101 (7%)
Query: 92 PRP-TRSPAP--LARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPR-----PESQLS 143
P+P T P P + P P G P + P P+ + P +
Sbjct: 543 PKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTA 602
Query: 144 DRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRP 184
P++ +P PG ++ P GG AQ + +P
Sbjct: 603 QTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQP 643
Score = 28.1 bits (61), Expect = 5.3
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 92 PRPTRSPAPL-ARRPGKP-PRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQ 147
P PT P P A P +P P P G P PPAAA A P A R RP+
Sbjct: 730 PSPTHDPKPAEAPMPAEPAPPGPASPGGAPE-PPAAARAG-GSPTAVRSILTKERRPE 785
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 47.8 bits (112), Expect = 6e-06
Identities = 38/89 (42%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 79 SRLARACYARRLPPRPTR-SPAPLARRPGKPPRRPKGAAG-HPSAPPAAAPAAPAQPPAP 136
S L A R P P SP PL RP PP RP +G H P +A AAP +PP
Sbjct: 94 SPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAP-RPPLA 152
Query: 137 RPESQLSDRPQSWEQKPRGPGRSARSAGA 165
RP Q S + EQ+P RS R AGA
Sbjct: 153 RPLPQGSVTAREQEQRP----RSRRRAGA 177
Score = 42.0 bits (97), Expect = 4e-04
Identities = 43/140 (30%), Positives = 51/140 (36%), Gaps = 28/140 (20%)
Query: 74 ERVERSRLAR--ACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAP-PAAAPAAP 130
ER +RL+ A RR P P P P +P+GA P+AP P PA P
Sbjct: 62 ERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARP 121
Query: 131 AQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLA------------QARQ 178
+ PP PRP P GP R A A P LA Q ++
Sbjct: 122 SSPP-PRP------------SLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQEQR 168
Query: 179 ARRRRPRAAAALTGRTHQRS 198
R RR A G H S
Sbjct: 169 PRSRRRAGAPEALGPVHAGS 188
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 47.0 bits (110), Expect = 1e-05
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 82 ARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAP----AAPAQPPAPR 137
+R C PP +RSP+ + P PPR G+ P PP AAP A A P R
Sbjct: 35 SRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHR 94
Query: 138 ---PESQLSDR-PQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGR 193
S++S R P + K G GR A + +A PA A+A +A + R
Sbjct: 95 LSASHSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPPSR 154
Query: 194 THQRS 198
RS
Sbjct: 155 ARSRS 159
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 47.0 bits (110), Expect = 1e-05
Identities = 36/79 (45%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 71 SATERVERSRLARACYARRLP-----PRPTRSPAPLARRPGKPPRRP----KGAAGHP-- 119
+A R ER R+ +ARRLP P P R L P PP RP G AG P
Sbjct: 98 AAAARPERQRV----WARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPAD 153
Query: 120 SAPPAAAPAAPAQPPAPRP 138
SAPP+ AP AP PAPRP
Sbjct: 154 SAPPSPAP-APRSRPAPRP 171
Score = 32.3 bits (72), Expect = 0.28
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 89 RLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPA----QPPAPRPESQLSD 144
R PP P +P PG P A HP + A P+ A P P Q +D
Sbjct: 36 RDPPPPRPAPPRPGEEPGNRHPPPPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQRAD 95
Query: 145 RPQSWEQKPRGPGRSARSAGAAAPPAGG 172
+ + R + R G+AA PA G
Sbjct: 96 EGAAAARPERQRVWARRLPGSAAAPAPG 123
Score = 27.7 bits (60), Expect = 6.9
Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 17/109 (15%)
Query: 105 PGKPPRRPKGAA-GHPSAPPAAAPAAPAQ-------PPAPRPESQLSDRPQSWEQKPRGP 156
P K R +G A G P + + A AP PP PRP RP P
Sbjct: 2 PNKASGRRQGRARGRPHSQVSLARRAPLMFGPGLRDPPPPRP---APPRPGEEPGNRHPP 58
Query: 157 GRSARS------AGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQRSR 199
+AR+ A +P AGGL A R RA +R R
Sbjct: 59 PPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQR 107
Score = 27.3 bits (59), Expect = 9.0
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 84 ACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRP---ES 140
+C AR P P PG+ AA P A P AP P
Sbjct: 68 SCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPAPGRDAL 127
Query: 141 QLSDRPQSWEQKPRGP--GRSARSAGAAAPPAGGLAQARQARR 181
+L P ++PR P G + A +A P ++R A R
Sbjct: 128 RLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAPRSRPAPR 170
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 47.0 bits (110), Expect = 1e-05
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 82 ARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAP----AAPAQPPAPR 137
+R C PP +RSP+ + P PPR G+ P PP AAP A A P R
Sbjct: 35 SRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHR 94
Query: 138 ---PESQLSDR-PQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGR 193
S++S R P + K G GR A + +A PA A+A +A + R
Sbjct: 95 LSASHSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPPSR 154
Query: 194 THQRS 198
RS
Sbjct: 155 ARSRS 159
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 47.0 bits (110), Expect = 1e-05
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 34/193 (17%)
Query: 21 RGKSGSVFVGDGTEPGFGAQPGSG------------GDRVCPGGRPRLLMAVKRRSGGFK 68
R +SGS G G P + S G R P + + +RRS
Sbjct: 1635 RSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRS---- 1690
Query: 69 SHSATERVERSRLARACYAR--------RLPPRPTRSPAPLARRPGKPPRRPKGAAGHPS 120
S S+ E ++RL+R + R PPR RSP+ + P + R + S
Sbjct: 1691 SRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRS-AS 1749
Query: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
+P + + P+P+P R +S +K R R RS G +Q+ R
Sbjct: 1750 SPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRS---------GSSQSTSRR 1800
Query: 181 RRRPRAAAALTGR 193
R+R R+ + +T R
Sbjct: 1801 RQRSRSRSRVTRR 1813
Score = 44.7 bits (104), Expect = 5e-05
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 94 PTRSPAPLARRPGKPPRRPKGAAGHPSAPP-------AAAPAAPAQPPAPRPESQLSDRP 146
PTR +P + P K P+ + PS P +++P +P PAP ++S P
Sbjct: 399 PTRDRSP-PKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSP 457
Query: 147 QSWEQKPRGPGRSARSAGAAAPPAGGLAQARQ---ARRRRPRAAAALTGRTHQRSRS 200
S K R GR+ R + P+ + ++R A+R R R+ T R H RSRS
Sbjct: 458 TS---KNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTP-TKRGHSRSRS 510
Score = 44.3 bits (103), Expect = 7e-05
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 5 RRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRS 64
R Q PG + + RG+S S G + S GR R +RRS
Sbjct: 535 RSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRS 594
Query: 65 GGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPA 124
+S + T R RSR ARR R +R+PA R P RR +P
Sbjct: 595 ---RSRTPTRRRSRSRTP----ARRGRSR-SRTPARRRSRTRSPVRR----RSRSRSPAR 642
Query: 125 AAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRP 184
+ + ++ PA R S+ + + R P R + + + P G +++R RR R
Sbjct: 643 RSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRS 702
Query: 185 RAAAAL-TGRTHQRS 198
R+ + + GR+H R+
Sbjct: 703 RSRSLVRRGRSHSRT 717
Score = 42.7 bits (99), Expect = 2e-04
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 24/190 (12%)
Query: 21 RGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRSGGFKSHSATERVERSR 80
R +SGS D +P Q S D P + + +++RS +S S+ E +SR
Sbjct: 1536 RSRSGSSQELD-VKPSASPQERSESDS-SPDSKAKTRTPLRQRS---RSGSSPEVDSKSR 1590
Query: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
L+ PR +RS + + KP P+ +G S+P APA A P R S
Sbjct: 1591 LS---------PRRSRSGSSPEVKD-KPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGS 1640
Query: 141 QLSDR------PQSWEQKPRGPGRSARS-AGAAAPPAGGLAQARQARRRRPRAAAALT-- 191
R S E P P +S + G+ + P RRR R++ LT
Sbjct: 1641 SSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRK 1700
Query: 192 GRTHQRSRSA 201
R +RSRSA
Sbjct: 1701 ARLSRRSRSA 1710
Score = 37.4 bits (85), Expect = 0.009
Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 15/150 (10%)
Query: 42 GSGGDRVCPGGRPRLLMAVKRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPL 101
GS DR P A + SG S T V + +C++R P+ SP PL
Sbjct: 2082 GSSSDRSRSATPP----ATRNHSG-----SRTPPVALNSSRMSCFSR-----PSMSPTPL 2127
Query: 102 ARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPR-PESQLSDRPQSWEQKPRGPGRSA 160
R P G++ P + A + P PR P+ Q + P++ Q +A
Sbjct: 2128 DRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTA 2187
Query: 161 RSAGAAAPPAGGLAQARQARRRRPRAAAAL 190
S G A PP A AR + A L
Sbjct: 2188 ISLGTARPPPSMSAAGLAARMSQVPAPVPL 2217
Score = 37.0 bits (84), Expect = 0.011
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 50 PGGRPRLLMAVKRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPP 109
P +PR L + RS K+ + T R +RS +++ RR +R +
Sbjct: 1763 PSPKPRGLQRSRSRSRREKTRT-TRRRDRSGSSQSTSRRR----------QRSRSRSRVT 1811
Query: 110 RRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQL--SDRPQSWEQKPRGPGRSARSAGAAA 167
RR +G +G+ S PA ++ R S+ + R +S + P + +RS + A
Sbjct: 1812 RRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPA 1871
Query: 168 PPAGGLAQARQARRRRPRAAAALTGRTHQRSRSA 201
++ RRR R+ + R RSR++
Sbjct: 1872 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1905
Score = 32.3 bits (72), Expect = 0.28
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 23/134 (17%)
Query: 60 VKRRSGGFKSHSATERVERSRLARACYARR------LPPRPTRSPAPLARRPGKPPRRPK 113
V RR ++ T R RSR A R LP + +RS +PLA R R P+
Sbjct: 2001 VTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPR 2060
Query: 114 GAAGHPSAPPAAAPAAPAQPPAPRPES---QLSDRPQSWEQKPRGPGRSARSAGAAAPPA 170
A G S PPA R S SDR +S P + +G+ PP
Sbjct: 2061 TARGKRS--------LTRSPPAIRRRSASGSSSDRSRS-----ATPPATRNHSGSRTPPV 2107
Query: 171 GGLAQARQARRRRP 184
L +R + RP
Sbjct: 2108 -ALNSSRMSCFSRP 2120
Score = 32.0 bits (71), Expect = 0.37
Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Query: 68 KSHS---ATERVERSRL-ARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPP 123
+SHS AT RSR AR +R P RS + R R P S P
Sbjct: 561 RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTP 620
Query: 124 AAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRR 183
A + P R S+ R +S + R P R RS + P G +++R RR
Sbjct: 621 ARRRSRTRSPVRRRSRSRSPAR-RSGRSRSRTPARRGRSR-SRTPARRGRSRSRTPARRS 678
Query: 184 PRAAAALTGRTHQRSRS 200
R+ + R RSRS
Sbjct: 679 GRSRSRTPAR-RGRSRS 694
Score = 31.2 bits (69), Expect = 0.63
Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 97 SPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGP 156
SP P ++ PPRR + + P A P +P P+ QK + P
Sbjct: 783 SPCP-KQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPK-----------QKSKTP 830
Query: 157 GRSARSAGAAAPPAGGLAQARQARRRRPRA 186
R + S+ + P RQ P+A
Sbjct: 831 SRQSHSSSSPHPKVKSGTPPRQGSITSPQA 860
Score = 31.2 bits (69), Expect = 0.63
Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 12/142 (8%)
Query: 71 SATERVERSRLARACYAR---RLPP---RPTRSPAPLARRPGKPPRRPKGAAGHPSAPPA 124
S T R RSR + R R PP R +RS P RR + P S P
Sbjct: 1905 SVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPP 1964
Query: 125 AAPAAPAQPPAP----RPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQ-- 178
+P R S+ S + + P RS +P +++R
Sbjct: 1965 VTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPP 2024
Query: 179 ARRRRPRAAAALTGRTHQRSRS 200
A RRR R+ L R RSRS
Sbjct: 2025 AIRRRSRSRTPLLPRKRSRSRS 2046
Score = 30.0 bits (66), Expect = 1.4
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 16/149 (10%)
Query: 52 GRPRLLMAVKRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRR 111
GR R KR S S + + RSR A+ R P R RS +P +RPG R
Sbjct: 493 GRSRSRTPTKRGH----SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSP--QRPGWSRSR 546
Query: 112 PKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAG 171
G + A + ++ PA R S+ + + R P R R + + P
Sbjct: 547 NTQRRGRSRS--ARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPAR--RRSRSRTPTR- 601
Query: 172 GLAQARQARRRRPRAAAALTGRTHQRSRS 200
R++R R P RT R RS
Sbjct: 602 -----RRSRSRTPARRGRSRSRTPARRRS 625
Score = 27.3 bits (59), Expect = 9.0
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 11/93 (11%)
Query: 68 KSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKP-PRRPKGAAGHPSAPPAAA 126
+SHS + SR+ R PR +RS +P + + PR + P
Sbjct: 928 RSHSGSSSPSPSRVTS-----RTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---- 978
Query: 127 PAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRS 159
P PP +S P+ Q P GP S
Sbjct: 979 -VKPETPPRQSHSGSISPYPKVKAQTPPGPSLS 1010
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/107 (38%), Positives = 50/107 (46%), Gaps = 22/107 (20%)
Query: 91 PPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAP------AAPAQPPAPRPESQLSD 144
PP P +PA LAR PG P P A P PPAAA AAPA PA + +S
Sbjct: 270 PPPPPPAPATLARPPGHPAGPPTAAPAVP--PPAAAQNGGSAGAAPAPAPAAGGPAGVSG 327
Query: 145 RPQSWEQKPRGPGRSARSAGAAAPPAGGLAQA-RQARRRRPRAAAAL 190
+P GPG A AAAP G A++ ++ + P AA L
Sbjct: 328 QP--------GPG-----AAAAAPAPGVKAESPKRVVQAAPPAAQTL 361
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/168 (29%), Positives = 62/168 (36%), Gaps = 14/168 (8%)
Query: 30 GDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRSGGFKSHSATERVERSRLARACYARR 89
G G PG G PG G + P G P + + SH A L A
Sbjct: 171 GPGPGPGPGPGPGPGPGK--PAG-PGAAQTLNGSAALLNSHHAA--APAVSLVNNGPAAL 225
Query: 90 LPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSW 149
LP +P + + P A PS P A APAAPA P P P + P +
Sbjct: 226 LPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPA-----PATL 280
Query: 150 EQKPRGPGRSARSAGAAAPPA----GGLAQARQARRRRPRAAAALTGR 193
+ P P +A A PPA GG A A A A ++G+
Sbjct: 281 ARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQ 328
Score = 39.7 bits (91), Expect = 0.002
Identities = 50/175 (28%), Positives = 62/175 (35%), Gaps = 38/175 (21%)
Query: 3 AQRRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKR 62
A + P PE + A G G+ V GA P + + PG P A +
Sbjct: 38 AHHHHLAPRTPE-VRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGA-PGAAPEPPPAGRA 95
Query: 63 RSGGFKSHSATERVERSRLARACYARRLPPRPTR-----SPAPLARRPGKPPRRPKGAAG 117
R GG R PP P R PAP A + +PP P+G+AG
Sbjct: 96 RPGGGGPQ-----------------RPGPPSPRRPLVPAGPAPPAAKL-RPP--PEGSAG 135
Query: 118 HPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGG 172
+ PAAA A PAP + KP GP A AG P G
Sbjct: 136 SCAPVPAAAAVAAGPEPAP-----------AGPAKPAGPAALAARAGPGPGPGPG 179
Score = 30.8 bits (68), Expect = 0.82
Identities = 33/102 (32%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 76 VERSRLARACYARRLPPRPTRSPAPLARRPGKP--PRRPKGAAGHPSAPPAAAPAAPAQP 133
+E A A + L PR A A G P GAAG + P A A AP
Sbjct: 29 LESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAG--AGPAAPAEGAPGAA 86
Query: 134 PAPRPESQLSDRPQSWEQKPRGPGRSARSAGAA--APPAGGL 173
P P P + RP + GP R A APPA L
Sbjct: 87 PEPPPAGRA--RPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 46.6 bits (109), Expect = 1e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 94 PTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKP 153
PT SP P R P PP RP G+ G PP A A PP P S+ P + P
Sbjct: 775 PTSSPTPQRRAPAVPPARP-GSRGPAPGPPPAGSALGGAPPVP---SRPGASPDPFGPPP 830
Query: 154 RGPGRSARSAGAAAPPAGGLAQARQARRRRP 184
+ P R R A P G A + RP
Sbjct: 831 QVPSRPNR-APPGVPSRSGQASPSRPESPRP 860
Score = 35.8 bits (81), Expect = 0.025
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 90 LPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQL 142
+P RP SP P P + P RP A P P + A+P++P +PRP L
Sbjct: 815 VPSRPGASPDPFG-PPPQVPSRPNRAP--PGVPSRSGQASPSRPESPRPPFDL 864
Score = 32.7 bits (73), Expect = 0.22
Identities = 29/84 (34%), Positives = 32/84 (38%), Gaps = 20/84 (23%)
Query: 88 RRLPPRPTRSPAPLARRPGKP------------PRRPKGAAGHPSAPPAAAPAAP--AQP 133
RR P P P PG P P RP GA+ P PP P+ P A P
Sbjct: 783 RRAPAVPPARPGSRGPAPGPPPAGSALGGAPPVPSRP-GASPDPFGPPPQVPSRPNRAPP 841
Query: 134 PAPRPESQLS-DRPQSWEQKPRGP 156
P Q S RP+S PR P
Sbjct: 842 GVPSRSGQASPSRPES----PRPP 861
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 46.2 bits (108), Expect = 2e-05
Identities = 55/179 (30%), Positives = 67/179 (37%), Gaps = 32/179 (17%)
Query: 5 RRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRS 64
RR+ P EN S RG+ G +E G R C R RL A S
Sbjct: 55 RRSFAPFPLENWISYLRGR------GSRSERG----------RECACARARLARARSPHS 98
Query: 65 GGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHP----- 119
+H R R P P P L R P PRR + + G P
Sbjct: 99 MS-PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHC 157
Query: 120 -SAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAG---AAAPPAGGLA 174
S P A APA+ PRP +++ + RGPGRS G AA+P AGG A
Sbjct: 158 SSVPGAPAPASQL----PRPAGEVNK--VKYPSAARGPGRSTLGVGCEPAASPAAGGWA 210
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 46.2 bits (108), Expect = 2e-05
Identities = 44/112 (39%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPA-APAQPP--APR 137
L+ A RR P RS P+A P R P AP ++ PA P+ PP APR
Sbjct: 103 LSEAERPRRPEPGGARS-RPVAASPAASSRARSRPESSPGAPGSSVPALLPSLPPLAAPR 161
Query: 138 PESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAA 189
P LS RP+ +P+ P G APPAGG Q R R PRA AA
Sbjct: 162 P---LSARPRLRPPQPQ-PLALTVGNGPRAPPAGGSRQPR-GSVRGPRARAA 208
Score = 29.3 bits (64), Expect = 2.4
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 108 PPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWE-QKPRGPGRSARSAGAA 166
P R P GAA + + P AP P++ + RP+ + PR PG SA+ A
Sbjct: 13 PHRHPLGAA------LSCTRVGSSPPSAPLPQTPPTKRPERFRLHSPRAPG-SAQPISAP 65
Query: 167 APPAGGLAQARQARRRRPRAAAA 189
G +++R AAAA
Sbjct: 66 EGRGGAGSRSRYCHGDGKLAAAA 88
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 46.2 bits (108), Expect = 2e-05
Identities = 55/179 (30%), Positives = 67/179 (37%), Gaps = 32/179 (17%)
Query: 5 RRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRS 64
RR+ P EN S RG+ G +E G R C R RL A S
Sbjct: 55 RRSFAPFPLENWISYLRGR------GSRSERG----------RECACARARLARARSPHS 98
Query: 65 GGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHP----- 119
+H R R P P P L R P PRR + + G P
Sbjct: 99 MS-PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHC 157
Query: 120 -SAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAG---AAAPPAGGLA 174
S P A APA+ PRP +++ + RGPGRS G AA+P AGG A
Sbjct: 158 SSVPGAPAPASQL----PRPAGEVNK--VKYPSAARGPGRSTLGVGCEPAASPAAGGWA 210
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 46.2 bits (108), Expect = 2e-05
Identities = 47/141 (33%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 55 RLLMAVKRRSGGFKSHSATER---VERSRLARACYARRLPPRPTRSPAPLAR--RPGKPP 109
R+ V+RR G + E +++ + R Y + R P R P PP
Sbjct: 53 RICRMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPP 112
Query: 110 RRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAA--A 167
R P+GA PAAA AA A PP P P P P R+ R+A AA A
Sbjct: 113 RAPRGA-------PAAA-AAAAPPPTPAPP------PPPAPVAAAAPARAPRAAAAAATA 158
Query: 168 PPAGGLAQ-ARQARRRRPRAA 187
PP+ G AQ +A+R P AA
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAA 179
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 84 ACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPA---------APAQPP 134
A A PP P P P P R P+ AA +APP+ PA AP P
Sbjct: 121 AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAP 180
Query: 135 APRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPP 169
P P + + P + ++ P +AR PP
Sbjct: 181 PPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPP 215
Score = 42.7 bits (99), Expect = 2e-04
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 87 ARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES-QLSDR 145
A+R P PAP A PP P+ A PPA A P PP P+P + +
Sbjct: 171 AQRAAPLAAPPPAPAAPPAVAPPAGPRRAP-----PPAVAAREPPLPPPPQPPAPPQQQQ 225
Query: 146 PQSWEQKPRGPGRSARSAGAAAP 168
P + +P G + R+ GAA P
Sbjct: 226 PPPPQPQPPPEGGAVRAGGAARP 248
Score = 38.1 bits (87), Expect = 0.005
Identities = 38/108 (35%), Positives = 43/108 (39%), Gaps = 18/108 (16%)
Query: 91 PPRPTRSP--APLARRPGKPPRRPKGAAGHPSAPPAAA------PAAPAQPPAPRPESQL 142
PP P R+P AP A PP P A P AP AAA AA A AP
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTP--APPPPPAPVAAAAPARAPRAAAAAATAPPSPGPA 165
Query: 143 SDRPQSWEQKP-RGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAA 189
P++ P P + + A APPAG RR P A AA
Sbjct: 166 QPGPRAQRAAPLAAPPPAPAAPPAVAPPAG-------PRRAPPPAVAA 206
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 45.8 bits (107), Expect = 2e-05
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 82 ARACYARRLPPRPTRSPAPLARRP--GKPPRRPKGAAGHPSAPPAAAPAA-PAQPPAPRP 138
ARA + LPP P P P R P G PP + A PSA P+ + AA P PP+
Sbjct: 7 ARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPA---PSASPSPSRAAGPFLPPSHAS 63
Query: 139 ESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARR 181
S S P++ +P P GAA GL + ++A R
Sbjct: 64 TSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAAR 106
Score = 32.7 bits (73), Expect = 0.22
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 114 GAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSA-----RSAGAAAP 168
GA+ +AP P P PP P + L P S P P SA R+AG P
Sbjct: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPS----PARPAPSASPSPSRAAGPFLP 58
Query: 169 PAGGLAQAR----QARRRRPR----------AAAAL---TGRTHQRSRSA 201
P+ +R +ARR P AA AL GRT + +R A
Sbjct: 59 PSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVA 108
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 45.8 bits (107), Expect = 2e-05
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 82 ARACYARRLPPRPTRSPAPLARRP--GKPPRRPKGAAGHPSAPPAAAPAA-PAQPPAPRP 138
ARA + LPP P P P R P G PP + A PSA P+ + AA P PP+
Sbjct: 7 ARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPA---PSASPSPSRAAGPFLPPSHAS 63
Query: 139 ESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQARR 181
S S P++ +P P GAA GL + ++A R
Sbjct: 64 TSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAAR 106
Score = 32.7 bits (73), Expect = 0.22
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 114 GAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSA-----RSAGAAAP 168
GA+ +AP P P PP P + L P S P P SA R+AG P
Sbjct: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPS----PARPAPSASPSPSRAAGPFLP 58
Query: 169 PAGGLAQAR----QARRRRPR----------AAAAL---TGRTHQRSRSA 201
P+ +R +ARR P AA AL GRT + +R A
Sbjct: 59 PSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVA 108
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 45.8 bits (107), Expect = 2e-05
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 78 RSRLARACYARRLPPR-PTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPA-----APA 131
R RL+ + + LP T P ++P PP GAA +APP A+P PA
Sbjct: 6 RRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPA 65
Query: 132 QPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
PAP+P S + + ++A SAG PA A AR+A+
Sbjct: 66 SAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAK 114
Score = 41.6 bits (96), Expect = 5e-04
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 88 RRLPPRPTRSPAPLARRPGKP--PRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDR 145
RRLPP P+ P+ + P+RP G H AP +++ A AQPP P +
Sbjct: 475 RRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTTHGDAPSSSSSLAEAQPPLAAPPQKPQPH 534
Query: 146 PQ 147
PQ
Sbjct: 535 PQ 536
Score = 32.7 bits (73), Expect = 0.22
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 19/88 (21%)
Query: 105 PGKPPRRPKGAAGHPSA--------PPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGP 156
P +PP P+G G P PP P P+ PP+ S S S Q+P GP
Sbjct: 450 PQRPP--PQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPS---SSSSSSSSSSAPQRPGGP 504
Query: 157 ------GRSARSAGAAAPPAGGLAQARQ 178
S+ S A PP Q Q
Sbjct: 505 TTHGDAPSSSSSLAEAQPPLAAPPQKPQ 532
>gi|19924101 synapsin II isoform IIb [Homo sapiens]
Length = 478
Score = 45.8 bits (107), Expect = 2e-05
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 78 RSRLARACYARRLPPR-PTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPA-----APA 131
R RL+ + + LP T P ++P PP GAA +APP A+P PA
Sbjct: 6 RRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPA 65
Query: 132 QPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
PAP+P S + + ++A SAG PA A AR+A+
Sbjct: 66 SAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAK 114
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 45.8 bits (107), Expect = 2e-05
Identities = 33/98 (33%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 90 LPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSW 149
L P P P P A+ PG GAAG APP PA PA P + PQ
Sbjct: 242 LSPEPPEPPPPAAKGPG---AHASGAAGTAPAPPGEPPAPGTCDPAFYPSQRSGAGPQ-- 296
Query: 150 EQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAA 187
PR PGR A A+ P +A + P+A+
Sbjct: 297 ---PR-PGRPADKDAASCGPGAAVAAVERGAAGLPKAS 330
Score = 33.9 bits (76), Expect = 0.097
Identities = 37/117 (31%), Positives = 42/117 (35%), Gaps = 37/117 (31%)
Query: 91 PPRPTRSPAPLARR-------PGKPP-----RRPKGAAGHPSAP-PAAAP---------- 127
PP P PAP A+ PG P RR A P AP PA AP
Sbjct: 410 PPAPAVPPAPPAQASFGAFSGPGGAPDSAFARRSPDAVASPGAPAPAPAPFRDLASAAAT 469
Query: 128 ------------AAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAA-APPAG 171
A PA PP P P + RP S ++P G A A +PP G
Sbjct: 470 EGGGGDCADAGTAGPA-PPPPAPSPRPGPRPPSPAEEPATCGVPEPGAAAGPSPPEG 525
Score = 29.3 bits (64), Expect = 2.4
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 108 PPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAA 167
P KG AG AP A PA PA PPAP ++ GPG + SA A
Sbjct: 392 PQAALKGGAGLEPAPKDAPPA-PAVPPAPPAQASFG--------AFSGPGGAPDSAFARR 442
Query: 168 PP 169
P
Sbjct: 443 SP 444
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 45.4 bits (106), Expect = 3e-05
Identities = 48/142 (33%), Positives = 53/142 (37%), Gaps = 44/142 (30%)
Query: 89 RLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPR----------- 137
RL RP PAP A PG PP PA+ P APA P APR
Sbjct: 756 RLVRRPPPGPAPAAASPGPPP-------------PASPPGAPASPRAPRTSPYGGLPAAP 802
Query: 138 ------PESQLS--DRPQSWEQK-----PRGPGRSARSAGAAAPPAGGLAQARQA----- 179
P +LS RP S Q GP S R A ++ P G AR A
Sbjct: 803 LAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPD 862
Query: 180 RR--RRPRAAAALTGRTHQRSR 199
RR P AA L + RSR
Sbjct: 863 RRDSASPGAAGGLDPQDSARSR 884
Score = 37.7 bits (86), Expect = 0.007
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Query: 92 PRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQ 151
P P PAP ++P PP P G APP P A A PP E R +S +
Sbjct: 22 PPPPPPPAPPQQQPPPPPP-PAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDS 80
Query: 152 KPRGPGRSARSAGAAAPPAG 171
PG ++ A P G
Sbjct: 81 SCGRPGTPGAASTAKGSPNG 100
Score = 35.8 bits (81), Expect = 0.025
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 22/109 (20%)
Query: 91 PPRPTRSPAPLARRPGKPPRR------------PKG-------AAGHPSAPPAAAPAAPA 131
PP P P P P PPR P+G + G P P AA+ A +
Sbjct: 38 PPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAASTAKGS 97
Query: 132 -QPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQARQA 179
R E Q S P E RGP S GAA+ PA G A +A
Sbjct: 98 PNGECGRGEPQCS--PAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEA 144
Score = 35.4 bits (80), Expect = 0.033
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 93 RPTRSPA--PLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWE 150
RP SP P P PP P P PPA P PP P ++ + E
Sbjct: 9 RPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADE 68
Query: 151 QKPRGPGRSARSAGAAAPPAGGLA 174
PRG RS R + P G A
Sbjct: 69 GGPRGRLRS-RDSSCGRPGTPGAA 91
Score = 35.0 bits (79), Expect = 0.043
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 104 RPGKPPRRPKGAAGHPSAPPAAAPAAPAQ--PPAPRPESQLSDRPQSWEQKPRGPGRSAR 161
RPG+ P GA P PP PA P Q PP P P P + PR
Sbjct: 9 RPGESP----GATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPE 64
Query: 162 SAGAAAPPAGGLAQARQARRRRPRAAAA 189
+A P G ++R + RP A
Sbjct: 65 AADEGGP--RGRLRSRDSSCGRPGTPGA 90
Score = 32.7 bits (73), Expect = 0.22
Identities = 16/45 (35%), Positives = 17/45 (37%)
Query: 113 KGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPG 157
+G G P P A PA PP P Q P P GPG
Sbjct: 4 RGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPG 48
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 45.4 bits (106), Expect = 3e-05
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 26/119 (21%)
Query: 84 ACYARRLPPRPTRSPAP----LARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPE 139
AC R+P RP P P LA R + PR + P P +P++P P P P
Sbjct: 76 ACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPS 135
Query: 140 SQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGL-AQARQARRRRPRAAAALTGRTHQR 197
++G + PP GG A AR RRR PR + + +R
Sbjct: 136 C---------------------ASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEER 173
>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
sapiens]
Length = 351
Score = 45.4 bits (106), Expect = 3e-05
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 90 LPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQP----PAPRPESQLSDR 145
+P P +PAP AR P RRP P+AP P P P P + L
Sbjct: 159 IPLYPRAAPAPAARPSPDPGRRPP-----PAAPAPVVHVGPVLPLLHDPVGVPLAPLGHG 213
Query: 146 PQSWEQKPRGPGRSARSAGAAAPPAGGLAQAR---QARRRRPRAAAALTGRTHQ 196
W + P R + PP+ G A+++ ARR RPR AL R +
Sbjct: 214 GVDWAENKERPRRLRLRSQRFRPPSPGAARSQLPETARRPRPRPRPALPRRARE 267
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 45.4 bits (106), Expect = 3e-05
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 26/119 (21%)
Query: 84 ACYARRLPPRPTRSPAP----LARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPE 139
AC R+P RP P P LA R + PR + P P +P++P P P P
Sbjct: 76 ACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPS 135
Query: 140 SQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGL-AQARQARRRRPRAAAALTGRTHQR 197
++G + PP GG A AR RRR PR + + +R
Sbjct: 136 C---------------------ASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEER 173
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 45.4 bits (106), Expect = 3e-05
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 91 PPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAA------PAAPAQPPAPRPESQLSD 144
PP P P + G P+ P G P PP P P +P P P+ S
Sbjct: 50 PPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSR 109
Query: 145 RPQSWEQKPRGPGRSARSAGAAAPPAGGLAQ 175
P+S KP+GP + PP G Q
Sbjct: 110 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 140
Score = 40.4 bits (93), Expect = 0.001
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
Query: 91 PPRPTRSPAPL---ARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQ 147
PP + P P +R P PP +P+G P P P +P P P+ +
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 153
Query: 148 SWEQKPRGP-------GRSARSAGA---AAPPAGG 172
KP+GP RS+RS PP GG
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGG 188
Score = 39.7 bits (91), Expect = 0.002
Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 89 RLPPRPTRSPAPLA-RRPGKPPRRPKGAAGHPSAPP------AAAPAAPAQPPAPRPESQ 141
R PP + P P +P PP P G P PP P P +P P P+
Sbjct: 298 RSPPGKPQGPPPQGGNQPQGPPPPP----GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGG 353
Query: 142 LSDR-PQSWEQKPRG-PGRSARSAGAAAPPAGGLAQARQA 179
R +S KP+G P + + PPAGG Q QA
Sbjct: 354 SKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 393
Score = 38.1 bits (87), Expect = 0.005
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 89 RLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPP------AAAPAAPAQPPAPRPESQL 142
R PP + P P + G P+ P G P PP P P +P P P+
Sbjct: 112 RSPPGKPQGPPP---QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDN 168
Query: 143 SDR-PQSWEQKPRGPGRSARSAGAAAPPAGGLAQ 175
R +S KP+GP + PP G Q
Sbjct: 169 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 202
Score = 38.1 bits (87), Expect = 0.005
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 16/94 (17%)
Query: 91 PPRPTRSPAPL----ARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRP 146
PP + P P +R PP +P+G P P P +P P P+
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG------ 332
Query: 147 QSWEQKPRGPGRSARSAGAAAPPAGGLAQARQAR 180
KP+GP + G PP G +++R AR
Sbjct: 333 ---GNKPQGPPPPGKPQG---PPPQGGSKSRSAR 360
Score = 38.1 bits (87), Expect = 0.005
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 18/77 (23%)
Query: 93 RPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQK 152
R RSP PGKP P+ +P PP A P QP AP P Q
Sbjct: 357 RSARSP------PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP-PAGQ----------- 398
Query: 153 PRGPGRSARSAGAAAPP 169
P+GP R + + PP
Sbjct: 399 PQGPPRPPQGGRPSRPP 415
Score = 36.6 bits (83), Expect = 0.015
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 91 PPRPTRSPAPL----ARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRP 146
PP + P P +R PP +P+G P P P +P P P+ +
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 214
Query: 147 QSWEQKPRGP-------GRSARSAGA---AAPPAGG 172
KP+GP +SARS PP GG
Sbjct: 215 PPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGG 250
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 87 ARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPP------AAAPAAPAQPPAPRPES 140
AR P +P P +P PP P G P PP P P +P P P+
Sbjct: 235 ARSPPGKPQGPPPQGGNQPQGPPPPP----GKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 290
Query: 141 QLSDR-PQSWEQKPRGPGRSARSAGAAAPPAGGLAQ 175
R +S KP+GP + PP G Q
Sbjct: 291 GSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 326
Score = 36.6 bits (83), Expect = 0.015
Identities = 18/48 (37%), Positives = 20/48 (41%)
Query: 87 ARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPP 134
AR P +P P P PP G P APPA P P +PP
Sbjct: 359 ARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 406
Score = 35.4 bits (80), Expect = 0.033
Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 89 RLPPRPTRSPAPLA-RRPGKPPRRPKGAAGHPSAPP------AAAPAAPAQPPAPRPE-S 140
R PP + P P +P PP P G P PP P P +P P P+
Sbjct: 174 RSPPGKPQGPPPQGGNQPQGPPPPP----GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 229
Query: 141 QLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQ 175
S +S KP+GP + PP G Q
Sbjct: 230 NKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 264
Score = 32.3 bits (72), Expect = 0.28
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 91 PPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWE 150
PP + + AR P P+ P G+ P P P +P P P+ +
Sbjct: 224 PPPQGDNKSQSARSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPP 280
Query: 151 QKPRGP-------GRSARSAGA---AAPPAGG 172
KP+GP RS+RS PP GG
Sbjct: 281 GKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGG 312
Score = 31.6 bits (70), Expect = 0.48
Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 15/109 (13%)
Query: 97 SPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPP---------APRPESQLSDRPQ 147
SP+ +A G P P P PP + P P PP P P + P
Sbjct: 28 SPSLIA---GNPQGAPPQGGNKPQGPP-SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 83
Query: 148 SWEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQ 196
KP+GP + G PP G +++ ++ +P+ G Q
Sbjct: 84 QGGNKPQGPPPPGKPQG--PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,547,954
Number of Sequences: 37866
Number of extensions: 829779
Number of successful extensions: 23840
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 1963
Number of HSP's that attempted gapping in prelim test: 9617
Number of HSP's gapped (non-prelim): 10737
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.