SYN2 11760

Name: SYN2	Sequence: fasta or formatted (478aa)		NCBI GI: 19924101
Description: synapsin II isoform IIb		Referenced in: Synapses
Other entries for this name: alt prot [582aa] synapsin II isoform IIa
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 46 3 C cysteine 1.5 7 1 D aspartate 5.4 26 1 E glutamate 4.2 20 1 F phenylalanine 3.8 18 2 G glycine 6.3 30 2 H histidine 2.1 10 1 I isoleucine 4.8 23 2 K lysine 5.6 27 2 L leucine 7.3 35 2 M methionine 3.1 15 2 N asparagine 3.3 16 2 P proline 9.8 47 7 Q glutamine 5.9 28 2 R arginine 4.2 20 3 S serine 7.3 35 2 T threonine 4.8 23 2 V valine 6.7 32 3 W tryptophan 0.8 4 1 Y tyrosine 3.3 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synapsin II isoform IIb SYN2 0.955 synapsin II isoform IIa SYN1 0.622 synapsin I isoform Ia SYN1 0.622 synapsin I isoform Ib SYN3 0.583 synapsin III isoform IIIg SYN3 0.577 synapsin III isoform IIIa SYN3 0.575 synapsin III isoform IIIc TAF4 0.032 TBP-associated factor 4 SFPQ 0.031 splicing factor proline/glutamine rich (polypyrimidin... PRR12 0.031 proline rich 12 PRDM6 0.027 PR domain containing 6 FMNL1 0.027 formin-like 1 ATOH8 0.026 atonal homolog 8 IRS2 0.026 insulin receptor substrate 2 SAMD1 0.026 sterile alpha motif domain containing 1 ENAH 0.025 enabled homolog isoform a ENAH 0.025 enabled homolog isoform b CASKIN1 0.025 CASK interacting protein 1 DIAPH1 0.025 diaphanous 1 isoform 2 DIAPH1 0.025 diaphanous 1 isoform 1 FHDC1 0.025 FH2 domain containing 1 ANTXR1 0.025 anthrax toxin receptor 1 isoform 1 precursor WASF2 0.024 WAS protein family, member 2 DGKK 0.024 diacylglycerol kinase kappa DMWD 0.024 dystrophia myotonica-containing WD repeat motif prot... HTT 0.024 huntingtin EIF3F 0.024 eukaryotic translation initiation factor 3, subunit 5... FMNL2 0.024 formin-like 2 ZFPM1 0.024 zinc finger protein, multitype 1 WASF1 0.023 Wiskott-Aldrich syndrome protein family member 1 [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.